BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_A23 (654 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 81 1e-16 SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 63 3e-11 SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 60 3e-10 SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 57 2e-09 SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 43 4e-05 SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit Apc1|Sc... 29 0.44 SPCC1259.11c |gyp2||GTPase activating protein Gyp2 |Schizosaccha... 29 0.44 SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 29 0.59 SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 28 1.4 SPAC18B11.05 |gpi18||pig-V|Schizosaccharomyces pombe|chr 1|||Manual 27 2.4 SPAC6F6.06c |rax2||cell polarity factor Rax2|Schizosaccharomyces... 26 4.1 SPBP23A10.04 |apc2||anaphase-promoting complex subunit Apc2 |Sch... 26 5.5 SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 25 7.2 SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 25 7.2 SPBC119.14 |rti1||Rad22 homolog Rti1|Schizosaccharomyces pombe|c... 25 9.5 SPCC24B10.12 |||CGI121 family protein|Schizosaccharomyces pombe|... 25 9.5 >SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 150 Score = 81.4 bits (192), Expect = 1e-16 Identities = 40/105 (38%), Positives = 67/105 (63%), Gaps = 5/105 (4%) Frame = +1 Query: 346 KNPTEDYLEGMMNEAP----GPINFTMFLTLFGERLQGTDPEDVIKNAFGCFDEXNNGVI 513 ++PT L+ M+NE G I+FT FLT+ +++ TD E+ ++ AF FD+ NG I Sbjct: 43 QSPTAAELQDMINEVDADGNGTIDFTEFLTMMARKMKDTDNEEEVREAFKVFDKDGNGYI 102 Query: 514 GEERLRELLTTMGDRFTDDDVDEMLREAPI-RDGLFDYVEFTRIL 645 E L +LT++G+R + ++V +M+REA DG+ +Y EF+R++ Sbjct: 103 TVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEEFSRVI 147 Score = 39.9 bits (89), Expect = 3e-04 Identities = 17/36 (47%), Positives = 27/36 (75%) Frame = +3 Query: 246 QIAEFKEAFNMIDQNRDGFIDKDDLHDMLASLAQKP 353 QIAEF+EAF++ D+++DG I ++L ++ SL Q P Sbjct: 10 QIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSP 45 Score = 29.1 bits (62), Expect = 0.59 Identities = 13/40 (32%), Positives = 24/40 (60%) Frame = +3 Query: 231 MFDQAQIAEFKEAFNMIDQNRDGFIDKDDLHDMLASLAQK 350 M D E +EAF + D++ +G+I ++L +L SL ++ Sbjct: 78 MKDTDNEEEVREAFKVFDKDGNGYITVEELTHVLTSLGER 117 >SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pombe|chr 1|||Manual Length = 141 Score = 63.3 bits (147), Expect = 3e-11 Identities = 35/124 (28%), Positives = 69/124 (55%), Gaps = 4/124 (3%) Frame = +1 Query: 286 RTGMDSLTRTICMICLHL*RKNPTEDYLEGMMNEAPGPINFTMFLTLF----GERLQGTD 453 R G + +T L +NPT + + + P ++ FL + G + G D Sbjct: 17 RHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVDMEQFLQVLNRPNGFDMPG-D 75 Query: 454 PEDVIKNAFGCFDEXNNGVIGEERLRELLTTMGDRFTDDDVDEMLREAPIRDGLFDYVEF 633 PE+ +K F FD+ G+IG LR +LT++G++ +++++DE+L+ P++DG+ +Y +F Sbjct: 76 PEEFVKG-FQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVKDGMVNYHDF 134 Query: 634 TRIL 645 +++ Sbjct: 135 VQMI 138 Score = 28.7 bits (61), Expect = 0.77 Identities = 11/32 (34%), Positives = 20/32 (62%) Frame = +3 Query: 258 FKEAFNMIDQNRDGFIDKDDLHDMLASLAQKP 353 +K+AF++ D++ G I K + D+L + Q P Sbjct: 8 YKQAFSLFDRHGTGRIPKTSIGDLLRACGQNP 39 >SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces pombe|chr 1|||Manual Length = 143 Score = 60.1 bits (139), Expect = 3e-10 Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 1/98 (1%) Frame = +1 Query: 349 NPTEDYLEGMMNEAPGPINFTMFLTLFGERLQGTDPEDVIKNAFGCFDEXNNGVIGEERL 528 N T+ L + NE I+ F++ +L+ T+ E+ AF FD+ N+G I + Sbjct: 41 NVTDAELAKLSNELGDAIDEKKFMSFVSNKLRETESEEEYIKAFRVFDKDNSGYIETAKF 100 Query: 529 RELLTTMGDRFTDDDVDEMLREA-PIRDGLFDYVEFTR 639 + + T+G++ +D++V M++EA P G FDY +F + Sbjct: 101 ADYMKTLGEKLSDNEVQLMVQEADPTNSGSFDYYDFVQ 138 Score = 26.2 bits (55), Expect = 4.1 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +3 Query: 246 QIAEFKEAFNMIDQNRDGFIDKDDLHDMLASL 341 Q E KEAF + D ++DG I + +L SL Sbjct: 7 QTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSL 38 >SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccharomyces pombe|chr 1|||Manual Length = 184 Score = 57.2 bits (132), Expect = 2e-09 Identities = 31/96 (32%), Positives = 49/96 (51%) Frame = +1 Query: 346 KNPTEDYLEGMMNEAPGPINFTMFLTLFGERLQGTDPEDVIKNAFGCFDEXNNGVIGEER 525 ++ +ED + M PIN FLT G L P + + AF FD+ +G I Sbjct: 79 QDASEDSINHMFESINPPINLAAFLTAMGSMLCRISPRNDLLEAFSTFDDTQSGKIPIST 138 Query: 526 LRELLTTMGDRFTDDDVDEMLREAPIRDGLFDYVEF 633 +R+ L++MGDR +V+ +LR + G+F Y +F Sbjct: 139 MRDALSSMGDRMDPQEVESILR-SYTSHGVFYYEKF 173 >SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Manual Length = 176 Score = 42.7 bits (96), Expect = 4e-05 Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 1/85 (1%) Frame = +1 Query: 394 GPINFTMFLTLFGERLQGTDPEDVIKNAFGCFDEXNNGVIGEERLRELLTTMGDRFTDDD 573 G + F+ + E++ DP + IK AF FD+ G I LR + + + D + Sbjct: 88 GYLQMEDFVRVMTEKIVERDPLEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQE 147 Query: 574 VDEMLREAPI-RDGLFDYVEFTRIL 645 ++ M+ E + +DG + EF I+ Sbjct: 148 LEAMIEEFDLDQDGEINEQEFIAIM 172 >SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit Apc1|Schizosaccharomyces pombe|chr 2|||Manual Length = 1458 Score = 29.5 bits (63), Expect = 0.44 Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = -2 Query: 290 VLINHIESLLELCYLSLIKHSKHIGGCTL--CALLVNATTGCL 168 +LIN ++S + LC+L H + + T+ C +V ++ C+ Sbjct: 1119 ILINFLDSFIRLCHLPAKTHDERVTAVTVIRCTQIVALSSSCV 1161 >SPCC1259.11c |gyp2||GTPase activating protein Gyp2 |Schizosaccharomyces pombe|chr 3|||Manual Length = 720 Score = 29.5 bits (63), Expect = 0.44 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 5/53 (9%) Frame = +1 Query: 394 GP-INFTMFLTLFGERLQG----TDPEDVIKNAFGCFDEXNNGVIGEERLREL 537 GP + F + L LF QG TD V+K CFD N G +E++ L Sbjct: 404 GPRVLFQVALALFKVNAQGILNATDDSSVMKVFRQCFDHINQGTAADEKMAAL 456 >SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schizosaccharomyces pombe|chr 1|||Manual Length = 190 Score = 29.1 bits (62), Expect = 0.59 Identities = 24/102 (23%), Positives = 39/102 (38%), Gaps = 2/102 (1%) Frame = +1 Query: 346 KNPTEDYLEGMMNEAP-GPINFTMFLTLFGERLQGTDPEDVIKNAFGCFDEXNNGVIG-E 519 K + + +G + P G +N + F ++ + DP + F FD NG I + Sbjct: 24 KKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFK 83 Query: 520 ERLRELLTTMGDRFTDDDVDEMLREAPIRDGLFDYVEFTRIL 645 E + L T D + +GL Y E RI+ Sbjct: 84 EFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIV 125 Score = 28.7 bits (61), Expect = 0.77 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = +3 Query: 186 INKKRAQRATSNVFAMFDQAQIAEFKEAFNMIDQNRDGFID 308 +NK Q+ F D + AE+ FN+ D +++G+ID Sbjct: 43 LNKSEFQKIYKQFFPFGDPSAFAEY--VFNVFDADKNGYID 81 >SPAC1687.14c |||EF hand family protein, unknown role|Schizosaccharomyces pombe|chr 1|||Manual Length = 76 Score = 27.9 bits (59), Expect = 1.4 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +3 Query: 255 EFKEAFNMIDQNRDGFIDKDDLHDMLASLAQ 347 E +EAF++ D G+ID +DL A L + Sbjct: 13 EAEEAFDLFDVTHKGYIDFEDLRRSCAQLGE 43 >SPAC18B11.05 |gpi18||pig-V|Schizosaccharomyces pombe|chr 1|||Manual Length = 426 Score = 27.1 bits (57), Expect = 2.4 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Frame = -1 Query: 597 CFPEHFIHIIVCKAIAHCGKQL-AESLLTNHTIVLFIEAPKCIF 469 CF F H I C A+ K + + +T +T++ + +P I+ Sbjct: 137 CFASIFFHAIACYALYLLTKSIFSNQKMTAYTVIFYCFSPSGIY 180 >SPAC6F6.06c |rax2||cell polarity factor Rax2|Schizosaccharomyces pombe|chr 1|||Manual Length = 1155 Score = 26.2 bits (55), Expect = 4.1 Identities = 12/46 (26%), Positives = 21/46 (45%) Frame = +1 Query: 448 TDPEDVIKNAFGCFDEXNNGVIGEERLRELLTTMGDRFTDDDVDEM 585 TD D++KN F F+ +N + L +L + DD + + Sbjct: 826 TDESDIVKNTFVSFNTTSNSLGNTTALSQLKGHINSVIVDDSYNNI 871 >SPBP23A10.04 |apc2||anaphase-promoting complex subunit Apc2 |Schizosaccharomyces pombe|chr 2|||Manual Length = 681 Score = 25.8 bits (54), Expect = 5.5 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = -1 Query: 486 APKCIFDDILRVSALQSLTKQSEKHRKVNWS 394 A + + D+I VSA+QS + S +V WS Sbjct: 590 ATETVLDEIQGVSAVQSEAESSAAEMRVYWS 620 >SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 646 Score = 25.4 bits (53), Expect = 7.2 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = -2 Query: 287 LINHIESLLELCYLSLIKHSKHIGGCTLCALLVNATTGCLAR*HGEFYKLAKVNV 123 L+N I++ + + + + HS + C C LLV+A+ G A+ FY N+ Sbjct: 125 LLNLIDTPGHVDFRAEVMHS--LAACEGCILLVDASQGIQAQTLSNFYMAFSQNL 177 >SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr 1|||Manual Length = 624 Score = 25.4 bits (53), Expect = 7.2 Identities = 13/33 (39%), Positives = 16/33 (48%) Frame = +3 Query: 123 YVYFSKFIKFTMSSRKTAGRRINKKRAQRATSN 221 +VY+S FTMS T I + A AT N Sbjct: 504 WVYYSNISTFTMSMNDTLSSGILENAALSATQN 536 >SPBC119.14 |rti1||Rad22 homolog Rti1|Schizosaccharomyces pombe|chr 2|||Manual Length = 371 Score = 25.0 bits (52), Expect = 9.5 Identities = 9/32 (28%), Positives = 17/32 (53%) Frame = +3 Query: 237 DQAQIAEFKEAFNMIDQNRDGFIDKDDLHDML 332 + ++ EF+E N + + +DK D HD + Sbjct: 267 ESPRVEEFEELLNQFEGDEKVSVDKIDAHDKM 298 >SPCC24B10.12 |||CGI121 family protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 174 Score = 25.0 bits (52), Expect = 9.5 Identities = 13/65 (20%), Positives = 35/65 (53%), Gaps = 2/65 (3%) Frame = -1 Query: 594 FPEHFIHIIVCKAIAHCGKQLAESLLTNHTI--VLFIEAPKCIFDDILRVSALQSLTKQS 421 FPE +H+ V + +++C + E L++ + I F++A ++ + + +++L + Sbjct: 6 FPETQVHVFVYENVSNCA-AIHEQLISQNPIYDYAFLDAATILYKKQVYSAIIRALEDRR 64 Query: 420 EKHRK 406 ++ K Sbjct: 65 DEQMK 69 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,532,749 Number of Sequences: 5004 Number of extensions: 50049 Number of successful extensions: 157 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 148 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 156 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 295793106 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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