Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_A16
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ...    30   1.2  
Z81510-1|CAB04160.1|  367|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AC024811-3|AAF60778.1|  209|Caenorhabditis elegans Hypothetical ...    27   8.7  

>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
            protein Y113G7B.12 protein.
          Length = 1042

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = -3

Query: 388  DIVVHGHHPYY-RVSLVNMEKYQ*SSRISIDESGRVRS*WVIFVALNNF 245
            D+ ++ H P     SL  +E +  S++++ID +  VRS +++F   ++F
Sbjct: 987  DLEIYSHEPIMIEKSLRKIEDWSTSNKLTIDSNDIVRSVYIVFFVCSHF 1035


>Z81510-1|CAB04160.1|  367|Caenorhabditis elegans Hypothetical
           protein F21D9.1 protein.
          Length = 367

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -1

Query: 177 VYPIFASRKSDKIHKLIFHSIEFWFSWFKK 88
           VY     +KS     L  +S+ FW  WF K
Sbjct: 100 VYRAMCKKKSSDPSTLAKYSVHFWVEWFYK 129


>AC024811-3|AAF60778.1|  209|Caenorhabditis elegans Hypothetical
           protein Y54E10BL.3 protein.
          Length = 209

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -1

Query: 228 NYFIAVALXFRLYLPKLVYPIFASRKSDKIHKLIF 124
           N F    L F L   +L++ IFA++K  KIHK +F
Sbjct: 64  NLFFLFILTF-LQENRLIFRIFATKKLLKIHKSLF 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,705,625
Number of Sequences: 27780
Number of extensions: 242528
Number of successful extensions: 564
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)