BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_A11 (656 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_03_0034 - 12663290-12663355,12663437-12663566,12663903-126639... 118 3e-27 06_03_0297 + 19267491-19267677,19267799-19267843,19268466-192685... 107 8e-24 02_02_0299 - 8726024-8726101,8726460-8726534,8726836-8726965,872... 106 1e-23 02_02_0206 - 7771835-7771913,7772083-7772219,7772364-7772422,777... 79 2e-15 10_08_0120 + 14972010-14973197 32 0.46 10_07_0176 - 13826764-13827064,13827271-13827377,13827474-138278... 30 1.9 10_08_0980 - 22002818-22003008,22003646-22003750,22003859-220039... 28 5.7 >07_03_0034 - 12663290-12663355,12663437-12663566,12663903-12663990, 12664106-12664178,12666144-12666248,12667610-12667732, 12667821-12667897,12668877-12669006 Length = 263 Score = 118 bits (285), Expect = 3e-27 Identities = 52/94 (55%), Positives = 70/94 (74%) Frame = +1 Query: 373 WFTESCDMWPGGTFSFEVKEVLHTEKSKYXNIQVFDTTSLGKVLVLDGIIQCTQKDEFSY 552 WF+E MWPG S +V++VL KS Y N+ VF +++ GKVLVLDG+IQ T++DE +Y Sbjct: 34 WFSEISPMWPGEAHSLKVEKVLFQGKSDYQNVMVFQSSTYGKVLVLDGVIQVTERDECAY 93 Query: 553 QEMISFLPLCCHKNPXNVLIVGGGDGXVAREVAK 654 QEMI+ LPLC K+P VL++GGGDG V REV++ Sbjct: 94 QEMITHLPLCSIKDPKKVLVIGGGDGGVLREVSR 127 >06_03_0297 + 19267491-19267677,19267799-19267843,19268466-19268542, 19268652-19268774,19269029-19269133,19269217-19269289, 19269588-19269690,19269890-19270144,19270996-19271125, 19271278-19271352,19271470-19271550 Length = 417 Score = 107 bits (257), Expect = 8e-24 Identities = 47/87 (54%), Positives = 65/87 (74%) Frame = +1 Query: 394 MWPGGTFSFEVKEVLHTEKSKYXNIQVFDTTSLGKVLVLDGIIQCTQKDEFSYQEMISFL 573 MWPG S +V+ +L+ KS Y I VF++++ G VLVLDGI+Q T+KDE +YQEM++ L Sbjct: 75 MWPGEAHSLKVENILYQGKSPYQEILVFESSTYGNVLVLDGIVQLTEKDECAYQEMVTHL 134 Query: 574 PLCCHKNPXNVLIVGGGDGXVAREVAK 654 PLC +P +VL+VGGGDG V RE+A+ Sbjct: 135 PLCSIPSPKSVLVVGGGDGGVLREIAR 161 >02_02_0299 - 8726024-8726101,8726460-8726534,8726836-8726965, 8727406-8727601,8727894-8727965,8728087-8728159, 8728240-8728344,8728502-8728624,8728730-8728806, 8729064-8729108,8729214-8729433 Length = 397 Score = 106 bits (255), Expect = 1e-23 Identities = 46/87 (52%), Positives = 64/87 (73%) Frame = +1 Query: 394 MWPGGTFSFEVKEVLHTEKSKYXNIQVFDTTSLGKVLVLDGIIQCTQKDEFSYQEMISFL 573 MWPG S +V+++L+ KS Y + VF++++ GKVLVLDGI+Q T KDE +YQEMI+ L Sbjct: 86 MWPGEAHSLKVEKILYQGKSPYQEVLVFESSTYGKVLVLDGIVQLTDKDECAYQEMITHL 145 Query: 574 PLCCHKNPXNVLIVGGGDGXVAREVAK 654 PLC +P VL++GGGDG V RE+ + Sbjct: 146 PLCSIPSPKKVLVIGGGDGGVLREICR 172 >02_02_0206 - 7771835-7771913,7772083-7772219,7772364-7772422, 7772535-7772610,7772717-7772873,7773241-7773329, 7773648-7773750,7773919-7774013,7774301-7774367, 7774894-7775066 Length = 344 Score = 79.4 bits (187), Expect = 2e-15 Identities = 39/96 (40%), Positives = 52/96 (54%) Frame = +1 Query: 367 TNWFTESCDMWPGGTFSFEVKEVLHTEKSKYXNIQVFDTTSLGKVLVLDGIIQCTQKDEF 546 + W+ E D + + VLH SKY I + DT GK L++DG +Q T+ DEF Sbjct: 39 SKWYEEEID--DDLKLCYALNSVLHRGASKYQEIALIDTKHFGKALIIDGKMQSTEVDEF 96 Query: 547 SYQEMISFLPLCCHKNPXNVLIVGGGDGXVAREVAK 654 Y E + PL H NP V I+GGG+G AREV + Sbjct: 97 IYHESLIHPPLLFHPNPKTVFIMGGGEGSAAREVLR 132 >10_08_0120 + 14972010-14973197 Length = 395 Score = 31.9 bits (69), Expect = 0.46 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 3/70 (4%) Frame = +3 Query: 390 RYVAWGYFLIRSQRSTAHRKIKIPXYPSF*YNQFG---EGSCLGRNHTMHSER*VFLSGN 560 RY FL+ + TAHR + P F FG EG+ + + H E VF + Sbjct: 196 RYATDVEFLVGGETFTAHRLVLAARSPVFMVELFGPMKEGTTVNKIHIFDMEAQVFRALL 255 Query: 561 DIIFAFMLPQ 590 I+ MLP+ Sbjct: 256 KFIYTDMLPE 265 >10_07_0176 - 13826764-13827064,13827271-13827377,13827474-13827836, 13827912-13828079,13828153-13828374,13828784-13829023, 13829640-13829719,13829853-13830018,13830720-13830783, 13830861-13830962,13831085-13831227,13831370-13831474, 13831551-13831706,13832125-13832241,13832315-13832392, 13832466-13832550,13833334-13833455,13833546-13833611, 13835190-13835284,13835427-13835523,13835873-13835983, 13836083-13836164,13836292-13836353,13836620-13836685, 13838002-13838232 Length = 1142 Score = 29.9 bits (64), Expect = 1.9 Identities = 14/42 (33%), Positives = 27/42 (64%) Frame = -1 Query: 233 IKTRFALLTNSTLLNSHFTITIYMSKDMIRYI*QTETLDNDL 108 + T + T TL ++ I++Y+S +MI++I T+ ++NDL Sbjct: 339 VVTILTMFTLITLYSTIIPISLYVSIEMIKFIQCTQFINNDL 380 >10_08_0980 - 22002818-22003008,22003646-22003750,22003859-22003987, 22004076-22004268,22004270-22004473,22004931-22005071, 22005325-22005486,22005664-22005666 Length = 375 Score = 28.3 bits (60), Expect = 5.7 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +1 Query: 427 KEVLHTEKSKYXNIQVFDTTSLGKVLVLDGII 522 K+ LH S Y N +V D +S G +V+DG++ Sbjct: 300 KKHLHGAFSTYKNYEVLDVSSNGGDVVVDGMV 331 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,593,098 Number of Sequences: 37544 Number of extensions: 298697 Number of successful extensions: 540 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 537 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 540 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1644004708 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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