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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_A11
         (656 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0034 - 12663290-12663355,12663437-12663566,12663903-126639...   118   3e-27
06_03_0297 + 19267491-19267677,19267799-19267843,19268466-192685...   107   8e-24
02_02_0299 - 8726024-8726101,8726460-8726534,8726836-8726965,872...   106   1e-23
02_02_0206 - 7771835-7771913,7772083-7772219,7772364-7772422,777...    79   2e-15
10_08_0120 + 14972010-14973197                                         32   0.46 
10_07_0176 - 13826764-13827064,13827271-13827377,13827474-138278...    30   1.9  
10_08_0980 - 22002818-22003008,22003646-22003750,22003859-220039...    28   5.7  

>07_03_0034 -
           12663290-12663355,12663437-12663566,12663903-12663990,
           12664106-12664178,12666144-12666248,12667610-12667732,
           12667821-12667897,12668877-12669006
          Length = 263

 Score =  118 bits (285), Expect = 3e-27
 Identities = 52/94 (55%), Positives = 70/94 (74%)
 Frame = +1

Query: 373 WFTESCDMWPGGTFSFEVKEVLHTEKSKYXNIQVFDTTSLGKVLVLDGIIQCTQKDEFSY 552
           WF+E   MWPG   S +V++VL   KS Y N+ VF +++ GKVLVLDG+IQ T++DE +Y
Sbjct: 34  WFSEISPMWPGEAHSLKVEKVLFQGKSDYQNVMVFQSSTYGKVLVLDGVIQVTERDECAY 93

Query: 553 QEMISFLPLCCHKNPXNVLIVGGGDGXVAREVAK 654
           QEMI+ LPLC  K+P  VL++GGGDG V REV++
Sbjct: 94  QEMITHLPLCSIKDPKKVLVIGGGDGGVLREVSR 127


>06_03_0297 +
           19267491-19267677,19267799-19267843,19268466-19268542,
           19268652-19268774,19269029-19269133,19269217-19269289,
           19269588-19269690,19269890-19270144,19270996-19271125,
           19271278-19271352,19271470-19271550
          Length = 417

 Score =  107 bits (257), Expect = 8e-24
 Identities = 47/87 (54%), Positives = 65/87 (74%)
 Frame = +1

Query: 394 MWPGGTFSFEVKEVLHTEKSKYXNIQVFDTTSLGKVLVLDGIIQCTQKDEFSYQEMISFL 573
           MWPG   S +V+ +L+  KS Y  I VF++++ G VLVLDGI+Q T+KDE +YQEM++ L
Sbjct: 75  MWPGEAHSLKVENILYQGKSPYQEILVFESSTYGNVLVLDGIVQLTEKDECAYQEMVTHL 134

Query: 574 PLCCHKNPXNVLIVGGGDGXVAREVAK 654
           PLC   +P +VL+VGGGDG V RE+A+
Sbjct: 135 PLCSIPSPKSVLVVGGGDGGVLREIAR 161


>02_02_0299 -
           8726024-8726101,8726460-8726534,8726836-8726965,
           8727406-8727601,8727894-8727965,8728087-8728159,
           8728240-8728344,8728502-8728624,8728730-8728806,
           8729064-8729108,8729214-8729433
          Length = 397

 Score =  106 bits (255), Expect = 1e-23
 Identities = 46/87 (52%), Positives = 64/87 (73%)
 Frame = +1

Query: 394 MWPGGTFSFEVKEVLHTEKSKYXNIQVFDTTSLGKVLVLDGIIQCTQKDEFSYQEMISFL 573
           MWPG   S +V+++L+  KS Y  + VF++++ GKVLVLDGI+Q T KDE +YQEMI+ L
Sbjct: 86  MWPGEAHSLKVEKILYQGKSPYQEVLVFESSTYGKVLVLDGIVQLTDKDECAYQEMITHL 145

Query: 574 PLCCHKNPXNVLIVGGGDGXVAREVAK 654
           PLC   +P  VL++GGGDG V RE+ +
Sbjct: 146 PLCSIPSPKKVLVIGGGDGGVLREICR 172


>02_02_0206 -
           7771835-7771913,7772083-7772219,7772364-7772422,
           7772535-7772610,7772717-7772873,7773241-7773329,
           7773648-7773750,7773919-7774013,7774301-7774367,
           7774894-7775066
          Length = 344

 Score = 79.4 bits (187), Expect = 2e-15
 Identities = 39/96 (40%), Positives = 52/96 (54%)
 Frame = +1

Query: 367 TNWFTESCDMWPGGTFSFEVKEVLHTEKSKYXNIQVFDTTSLGKVLVLDGIIQCTQKDEF 546
           + W+ E  D        + +  VLH   SKY  I + DT   GK L++DG +Q T+ DEF
Sbjct: 39  SKWYEEEID--DDLKLCYALNSVLHRGASKYQEIALIDTKHFGKALIIDGKMQSTEVDEF 96

Query: 547 SYQEMISFLPLCCHKNPXNVLIVGGGDGXVAREVAK 654
            Y E +   PL  H NP  V I+GGG+G  AREV +
Sbjct: 97  IYHESLIHPPLLFHPNPKTVFIMGGGEGSAAREVLR 132


>10_08_0120 + 14972010-14973197
          Length = 395

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
 Frame = +3

Query: 390 RYVAWGYFLIRSQRSTAHRKIKIPXYPSF*YNQFG---EGSCLGRNHTMHSER*VFLSGN 560
           RY     FL+  +  TAHR +     P F    FG   EG+ + + H    E  VF +  
Sbjct: 196 RYATDVEFLVGGETFTAHRLVLAARSPVFMVELFGPMKEGTTVNKIHIFDMEAQVFRALL 255

Query: 561 DIIFAFMLPQ 590
             I+  MLP+
Sbjct: 256 KFIYTDMLPE 265


>10_07_0176 -
           13826764-13827064,13827271-13827377,13827474-13827836,
           13827912-13828079,13828153-13828374,13828784-13829023,
           13829640-13829719,13829853-13830018,13830720-13830783,
           13830861-13830962,13831085-13831227,13831370-13831474,
           13831551-13831706,13832125-13832241,13832315-13832392,
           13832466-13832550,13833334-13833455,13833546-13833611,
           13835190-13835284,13835427-13835523,13835873-13835983,
           13836083-13836164,13836292-13836353,13836620-13836685,
           13838002-13838232
          Length = 1142

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/42 (33%), Positives = 27/42 (64%)
 Frame = -1

Query: 233 IKTRFALLTNSTLLNSHFTITIYMSKDMIRYI*QTETLDNDL 108
           + T   + T  TL ++   I++Y+S +MI++I  T+ ++NDL
Sbjct: 339 VVTILTMFTLITLYSTIIPISLYVSIEMIKFIQCTQFINNDL 380


>10_08_0980 -
           22002818-22003008,22003646-22003750,22003859-22003987,
           22004076-22004268,22004270-22004473,22004931-22005071,
           22005325-22005486,22005664-22005666
          Length = 375

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +1

Query: 427 KEVLHTEKSKYXNIQVFDTTSLGKVLVLDGII 522
           K+ LH   S Y N +V D +S G  +V+DG++
Sbjct: 300 KKHLHGAFSTYKNYEVLDVSSNGGDVVVDGMV 331


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,593,098
Number of Sequences: 37544
Number of extensions: 298697
Number of successful extensions: 540
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 540
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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