Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_A11
(656 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M64231-1|AAA60574.1| 302|Homo sapiens spermidine synthase protein. 133 6e-31
M34338-1|AAA36633.1| 302|Homo sapiens spermidine synthase protein. 133 6e-31
BC033106-1|AAH33106.1| 302|Homo sapiens spermidine synthase pro... 133 6e-31
BC000309-1|AAH00309.1| 302|Homo sapiens spermidine synthase pro... 133 6e-31
AL109811-6|CAI22104.1| 302|Homo sapiens spermidine synthase pro... 133 6e-31
Z49099-1|CAA88921.1| 368|Homo sapiens spermine synthase protein. 48 4e-05
U53331-1|AAD08634.1| 349|Homo sapiens spermidine aminopropyltra... 48 4e-05
BC085621-1|AAH85621.1| 366|Homo sapiens spermine synthase protein. 48 4e-05
BC009898-1|AAH09898.1| 366|Homo sapiens spermine synthase protein. 48 4e-05
AD001528-1|AAB61308.1| 366|Homo sapiens spermidine aminopropylt... 48 4e-05
AB209417-1|BAD92654.1| 503|Homo sapiens zinc finger protein 519... 33 1.2
BC024227-1|AAH24227.1| 540|Homo sapiens zinc finger protein 519... 32 1.6
>M64231-1|AAA60574.1| 302|Homo sapiens spermidine synthase protein.
Length = 302
Score = 133 bits (321), Expect = 6e-31
Identities = 56/94 (59%), Positives = 72/94 (76%)
Frame = +1
Query: 373 WFTESCDMWPGGTFSFEVKEVLHTEKSKYXNIQVFDTTSLGKVLVLDGIIQCTQKDEFSY 552
WF E+C +WPG S +V+++LH +S+Y +I VF + + G VLVLDG+IQCT++DEFSY
Sbjct: 20 WFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSY 79
Query: 553 QEMISFLPLCCHKNPXNVLIVGGGDGXVAREVAK 654
QEMI+ LPLC H NP VLI+GGGDG V REV K
Sbjct: 80 QEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVK 113
>M34338-1|AAA36633.1| 302|Homo sapiens spermidine synthase protein.
Length = 302
Score = 133 bits (321), Expect = 6e-31
Identities = 56/94 (59%), Positives = 72/94 (76%)
Frame = +1
Query: 373 WFTESCDMWPGGTFSFEVKEVLHTEKSKYXNIQVFDTTSLGKVLVLDGIIQCTQKDEFSY 552
WF E+C +WPG S +V+++LH +S+Y +I VF + + G VLVLDG+IQCT++DEFSY
Sbjct: 20 WFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSY 79
Query: 553 QEMISFLPLCCHKNPXNVLIVGGGDGXVAREVAK 654
QEMI+ LPLC H NP VLI+GGGDG V REV K
Sbjct: 80 QEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVK 113
>BC033106-1|AAH33106.1| 302|Homo sapiens spermidine synthase
protein.
Length = 302
Score = 133 bits (321), Expect = 6e-31
Identities = 56/94 (59%), Positives = 72/94 (76%)
Frame = +1
Query: 373 WFTESCDMWPGGTFSFEVKEVLHTEKSKYXNIQVFDTTSLGKVLVLDGIIQCTQKDEFSY 552
WF E+C +WPG S +V+++LH +S+Y +I VF + + G VLVLDG+IQCT++DEFSY
Sbjct: 20 WFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSY 79
Query: 553 QEMISFLPLCCHKNPXNVLIVGGGDGXVAREVAK 654
QEMI+ LPLC H NP VLI+GGGDG V REV K
Sbjct: 80 QEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVK 113
>BC000309-1|AAH00309.1| 302|Homo sapiens spermidine synthase
protein.
Length = 302
Score = 133 bits (321), Expect = 6e-31
Identities = 56/94 (59%), Positives = 72/94 (76%)
Frame = +1
Query: 373 WFTESCDMWPGGTFSFEVKEVLHTEKSKYXNIQVFDTTSLGKVLVLDGIIQCTQKDEFSY 552
WF E+C +WPG S +V+++LH +S+Y +I VF + + G VLVLDG+IQCT++DEFSY
Sbjct: 20 WFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSY 79
Query: 553 QEMISFLPLCCHKNPXNVLIVGGGDGXVAREVAK 654
QEMI+ LPLC H NP VLI+GGGDG V REV K
Sbjct: 80 QEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVK 113
>AL109811-6|CAI22104.1| 302|Homo sapiens spermidine synthase
protein.
Length = 302
Score = 133 bits (321), Expect = 6e-31
Identities = 56/94 (59%), Positives = 72/94 (76%)
Frame = +1
Query: 373 WFTESCDMWPGGTFSFEVKEVLHTEKSKYXNIQVFDTTSLGKVLVLDGIIQCTQKDEFSY 552
WF E+C +WPG S +V+++LH +S+Y +I VF + + G VLVLDG+IQCT++DEFSY
Sbjct: 20 WFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSY 79
Query: 553 QEMISFLPLCCHKNPXNVLIVGGGDGXVAREVAK 654
QEMI+ LPLC H NP VLI+GGGDG V REV K
Sbjct: 80 QEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVK 113
>Z49099-1|CAA88921.1| 368|Homo sapiens spermine synthase protein.
Length = 368
Score = 47.6 bits (108), Expect = 4e-05
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Frame = +1
Query: 397 WP---GGTFSFEVKEVLHTEKSKYXNIQVFDTTSLGKVLVLDGIIQCTQKDEFSYQEMIS 567
WP G +++ EV++ E S Y NI++ + G +L+L G + + D +Y I
Sbjct: 126 WPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIM 184
Query: 568 FLPLCCHKNPXNVLIVGGGDGXVAREVAK 654
+ +VLI+GGGDG + E+ K
Sbjct: 185 GSGKEDYTGK-DVLILGGGDGGILCEIVK 212
>U53331-1|AAD08634.1| 349|Homo sapiens spermidine
aminopropyltransferase protein.
Length = 349
Score = 47.6 bits (108), Expect = 4e-05
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Frame = +1
Query: 397 WP---GGTFSFEVKEVLHTEKSKYXNIQVFDTTSLGKVLVLDGIIQCTQKDEFSYQEMIS 567
WP G +++ EV++ E S Y NI++ + G +L+L G + + D +Y I
Sbjct: 107 WPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIM 165
Query: 568 FLPLCCHKNPXNVLIVGGGDGXVAREVAK 654
+ +VLI+GGGDG + E+ K
Sbjct: 166 GSGKEDYTGK-DVLILGGGDGGILCEIVK 193
>BC085621-1|AAH85621.1| 366|Homo sapiens spermine synthase protein.
Length = 366
Score = 47.6 bits (108), Expect = 4e-05
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Frame = +1
Query: 397 WP---GGTFSFEVKEVLHTEKSKYXNIQVFDTTSLGKVLVLDGIIQCTQKDEFSYQEMIS 567
WP G +++ EV++ E S Y NI++ + G +L+L G + + D +Y I
Sbjct: 124 WPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIM 182
Query: 568 FLPLCCHKNPXNVLIVGGGDGXVAREVAK 654
+ +VLI+GGGDG + E+ K
Sbjct: 183 GSGKEDYTGK-DVLILGGGDGGILCEIVK 210
>BC009898-1|AAH09898.1| 366|Homo sapiens spermine synthase protein.
Length = 366
Score = 47.6 bits (108), Expect = 4e-05
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Frame = +1
Query: 397 WP---GGTFSFEVKEVLHTEKSKYXNIQVFDTTSLGKVLVLDGIIQCTQKDEFSYQEMIS 567
WP G +++ EV++ E S Y NI++ + G +L+L G + + D +Y I
Sbjct: 124 WPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIM 182
Query: 568 FLPLCCHKNPXNVLIVGGGDGXVAREVAK 654
+ +VLI+GGGDG + E+ K
Sbjct: 183 GSGKEDYTGK-DVLILGGGDGGILCEIVK 210
>AD001528-1|AAB61308.1| 366|Homo sapiens spermidine
aminopropyltransferase protein.
Length = 366
Score = 47.6 bits (108), Expect = 4e-05
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Frame = +1
Query: 397 WP---GGTFSFEVKEVLHTEKSKYXNIQVFDTTSLGKVLVLDGIIQCTQKDEFSYQEMIS 567
WP G +++ EV++ E S Y NI++ + G +L+L G + + D +Y I
Sbjct: 124 WPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIM 182
Query: 568 FLPLCCHKNPXNVLIVGGGDGXVAREVAK 654
+ +VLI+GGGDG + E+ K
Sbjct: 183 GSGKEDYTGK-DVLILGGGDGGILCEIVK 210
>AB209417-1|BAD92654.1| 503|Homo sapiens zinc finger protein 519
variant protein.
Length = 503
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 252 CIPCSKYKNSFRPSYELNITELTFHNHDIYVQRYDSIH 139
CIP +KY++ F S N ++ F NHD + ++ S H
Sbjct: 102 CIPMNKYQHKFLKSVFCNKNQINF-NHDSNISKHHSTH 138
>BC024227-1|AAH24227.1| 540|Homo sapiens zinc finger protein 519
protein.
Length = 540
Score = 32.3 bits (70), Expect = 1.6
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 252 CIPCSKYKNSFRPSYELNITELTFHNHDIYVQRYDSIH 139
CIP +KY++ F S N ++ F NHD + ++ S H
Sbjct: 139 CIPMNKYQHKFLKSVFCNKNQINF-NHDSDISKHHSTH 175
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,943,717
Number of Sequences: 237096
Number of extensions: 1843455
Number of successful extensions: 2945
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2945
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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