Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_A07
         (626 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease pr...    25   2.0  
AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse t...    24   4.5  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   6.0  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   7.9  

>AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease
           protein.
          Length = 435

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 609 SFVXHICFSNGMSIGNCVP 553
           S + H+C   G+S+G C P
Sbjct: 129 SVLQHLCIVEGISVGICCP 147


>AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 208 FHVVIYNNKPLTLRHFIYWYFHRFI 134
           F +VIYNN     R ++  Y H F+
Sbjct: 15  FELVIYNNLLYACRSYLSPYQHGFV 39


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 149 IPINKMSQRKRFVIVNNHVKELQGEQDDT 235
           IP+NK+S RK    V    +EL G+++ T
Sbjct: 574 IPLNKISGRKIDPSVARFAEELVGKENVT 602


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -3

Query: 312 FCSEXFDILSNCNEHCLIISFLFALFVSSCSPCN 211
           + SE F   S   + C++   LF+LF++    CN
Sbjct: 661 YLSEEFFCTSGVPQGCVLSPLLFSLFINDV--CN 692


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 559,146
Number of Sequences: 2352
Number of extensions: 9452
Number of successful extensions: 62
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)