Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_A07
         (626 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF022980-5|AAG24192.1|  328|Caenorhabditis elegans Serpentine re...    30   1.6  
Z54238-2|CAA90994.1|  200|Caenorhabditis elegans Hypothetical pr...    28   4.8  
U41272-9|AAA82452.4| 1256|Caenorhabditis elegans Prion-like-(q/n...    28   6.3  
Z92780-1|CAB07174.1| 1186|Caenorhabditis elegans Hypothetical pr...    27   8.3  
AF025461-3|AAB70998.3|  632|Caenorhabditis elegans Hypothetical ...    27   8.3  
AF025461-2|ABC71819.1|  670|Caenorhabditis elegans Hypothetical ...    27   8.3  

>AF022980-5|AAG24192.1|  328|Caenorhabditis elegans Serpentine
           receptor, class j protein45 protein.
          Length = 328

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
 Frame = -2

Query: 229 ILLSLQFFHVVIYNNKPLTLRHFIYWY----FHRFIVTFMYYHYGCY 101
           +LLS   +  ++ ++  LT RHF +WY    F   +V F  +H  CY
Sbjct: 105 VLLSHFIYRYLVISDSSLTRRHF-HWYMTGSFLLSVVYFSLWHVTCY 150


>Z54238-2|CAA90994.1|  200|Caenorhabditis elegans Hypothetical
           protein T28C6.3 protein.
          Length = 200

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
 Frame = +2

Query: 188 IVNNHVKELQGEQDDTNK-----ANKKEIIKQCSLQLDKMSXNSEQNYQVNR 328
           +VN +VKE   E+DD +K        K II++ +L +   S NS+    V +
Sbjct: 115 VVNEYVKESDDEEDDEDKEEYEDEEGKSIIEKEALTISPNSCNSKHTRNVTK 166


>U41272-9|AAA82452.4| 1256|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 62
           protein.
          Length = 1256

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = +2

Query: 266 QCSLQLDKMSXNSEQNYQVNRFQSNEXINQ 355
           QC LQ ++++ N+ Q+ QVN+   N+ +++
Sbjct: 95  QCQLQQNELTDNTHQSSQVNQCDYNQNMSE 124


>Z92780-1|CAB07174.1| 1186|Caenorhabditis elegans Hypothetical
           protein C45G3.1 protein.
          Length = 1186

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 15/61 (24%), Positives = 29/61 (47%)
 Frame = +2

Query: 104 TTIMVVHKGNDEPMEIPINKMSQRKRFVIVNNHVKELQGEQDDTNKANKKEIIKQCSLQL 283
           T  MV+ + +D      +   + +KR V+   H  E+  EQD+ ++   K+ +   +  L
Sbjct: 670 TIAMVIEEEDDSENNETVVPSTLKKRTVVRMEHNAEVFREQDEDDENQDKDTVAPSAENL 729

Query: 284 D 286
           D
Sbjct: 730 D 730


>AF025461-3|AAB70998.3|  632|Caenorhabditis elegans Hypothetical
           protein M01D1.2a protein.
          Length = 632

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = +2

Query: 149 IPINKMSQRKRFVIVNNHVKELQGEQDDTNK--ANKKEIIKQCSLQLDKMSXNSEQNYQV 322
           I I   S+  R   V   +K+L     D +       +++KQ +L  +KM   ++Q  +V
Sbjct: 453 IDIGVRSKFGRSTTVQKRIKDLDTRNKDLSSDIGTLGDVVKQLTLMNEKMEKEADQRAEV 512

Query: 323 N 325
           N
Sbjct: 513 N 513


>AF025461-2|ABC71819.1|  670|Caenorhabditis elegans Hypothetical
           protein M01D1.2b protein.
          Length = 670

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = +2

Query: 149 IPINKMSQRKRFVIVNNHVKELQGEQDDTNK--ANKKEIIKQCSLQLDKMSXNSEQNYQV 322
           I I   S+  R   V   +K+L     D +       +++KQ +L  +KM   ++Q  +V
Sbjct: 453 IDIGVRSKFGRSTTVQKRIKDLDTRNKDLSSDIGTLGDVVKQLTLMNEKMEKEADQRAEV 512

Query: 323 N 325
           N
Sbjct: 513 N 513


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,214,118
Number of Sequences: 27780
Number of extensions: 221039
Number of successful extensions: 647
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)