Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_A02
(646 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L18963-1|AAC14457.1| 152|Caenorhabditis elegans unc-60 protein. 64 1e-10
AF024494-2|AAL02463.1| 152|Caenorhabditis elegans Uncoordinated... 64 1e-10
L18963-2|AAC14458.1| 165|Caenorhabditis elegans unc-60 protein. 39 0.003
AF024494-3|AAL02461.1| 165|Caenorhabditis elegans Uncoordinated... 39 0.003
AF024494-1|AAL02462.2| 212|Caenorhabditis elegans Uncoordinated... 39 0.003
U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical p... 31 0.53
U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical p... 31 0.53
Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical p... 30 1.6
Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical pr... 30 1.6
AC025723-3|AAK29935.1| 254|Caenorhabditis elegans Hypothetical ... 29 2.8
Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical pr... 28 6.5
AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related n... 28 6.5
>L18963-1|AAC14457.1| 152|Caenorhabditis elegans unc-60 protein.
Length = 152
Score = 63.7 bits (148), Expect = 1e-10
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Frame = +3
Query: 66 MASGVTVSDACKTTYEEIKKDKKHRYVVFYI-RDEKQIDVETVGERNAEYEQFLEDLQK- 239
MASGV V +CK Y+ + +H Y++F I +++ I VE VGE+NA Y +F+E+++K
Sbjct: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60
Query: 240 -GGTGECXYGLFDFEYTHQCQXHVG 311
EC Y D E T Q Q G
Sbjct: 61 VEDGKECRYAAVDVEVTVQRQGAEG 85
Score = 35.5 bits (78), Expect = 0.032
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1
Query: 328 KLFLMSWCPDTAXVXXXMLYSSSFDALKKSLXRSS 432
K+ + +CPD A V MLY+SS ALK SL S
Sbjct: 91 KVIFVQYCPDNAPVRRRMLYASSVRALKASLGLES 125
>AF024494-2|AAL02463.1| 152|Caenorhabditis elegans Uncoordinated
protein 60, isoform c protein.
Length = 152
Score = 63.7 bits (148), Expect = 1e-10
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Frame = +3
Query: 66 MASGVTVSDACKTTYEEIKKDKKHRYVVFYI-RDEKQIDVETVGERNAEYEQFLEDLQK- 239
MASGV V +CK Y+ + +H Y++F I +++ I VE VGE+NA Y +F+E+++K
Sbjct: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60
Query: 240 -GGTGECXYGLFDFEYTHQCQXHVG 311
EC Y D E T Q Q G
Sbjct: 61 VEDGKECRYAAVDVEVTVQRQGAEG 85
Score = 35.5 bits (78), Expect = 0.032
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1
Query: 328 KLFLMSWCPDTAXVXXXMLYSSSFDALKKSLXRSS 432
K+ + +CPD A V MLY+SS ALK SL S
Sbjct: 91 KVIFVQYCPDNAPVRRRMLYASSVRALKASLGLES 125
>L18963-2|AAC14458.1| 165|Caenorhabditis elegans unc-60 protein.
Length = 165
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 17/91 (18%)
Frame = +3
Query: 66 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVETVGERN------------- 203
M+SGV V +T+++++ + +K +RY++F I DE ++ VE ++
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59
Query: 204 -AEYEQFLEDLQK--GGTGECXYGLFDFEYT 287
A +++F+ED++ +C Y +FDF++T
Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFT 90
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 328 KLFLMSWCPDTAXVXXXMLYSSSFDALKKSL 420
K+ + CPD A + M+Y+SS A+K SL
Sbjct: 103 KIIFLQICPDGASIKKKMVYASSAAAIKTSL 133
>AF024494-3|AAL02461.1| 165|Caenorhabditis elegans Uncoordinated
protein 60, isoform a protein.
Length = 165
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 17/91 (18%)
Frame = +3
Query: 66 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVETVGERN------------- 203
M+SGV V +T+++++ + +K +RY++F I DE ++ VE ++
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59
Query: 204 -AEYEQFLEDLQK--GGTGECXYGLFDFEYT 287
A +++F+ED++ +C Y +FDF++T
Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFT 90
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 328 KLFLMSWCPDTAXVXXXMLYSSSFDALKKSL 420
K+ + CPD A + M+Y+SS A+K SL
Sbjct: 103 KIIFLQICPDGASIKKKMVYASSAAAIKTSL 133
>AF024494-1|AAL02462.2| 212|Caenorhabditis elegans Uncoordinated
protein 60, isoform b protein.
Length = 212
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 17/91 (18%)
Frame = +3
Query: 66 MASGVTVSDACKTTYEEIKKDKK-HRYVVFYIRDEKQIDVETVGERN------------- 203
M+SGV V +T+++++ + +K +RY++F I DE ++ VE ++
Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKI-DENKVIVEAAVTQDQLGITGDDYDDSS 59
Query: 204 -AEYEQFLEDLQK--GGTGECXYGLFDFEYT 287
A +++F+ED++ +C Y +FDF++T
Sbjct: 60 KAAFDKFVEDVKSRTDNLTDCRYAVFDFKFT 90
Score = 33.1 bits (72), Expect = 0.17
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +1
Query: 337 LMSWCPDTAXVXXXMLYSSSFDALKKSLXRSS 432
L++ CPD A V MLY+SS ALK SL S
Sbjct: 154 LLNNCPDNAPVRRRMLYASSVRALKASLGLES 185
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 328 KLFLMSWCPDTAXVXXXMLYSSSFDALKKSL 420
K+ + CPD A + M+Y+SS A+K SL
Sbjct: 103 KIIFLQICPDGASIKKKMVYASSAAAIKTSL 133
>U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical
protein F52C9.1a protein.
Length = 1336
Score = 31.5 bits (68), Expect = 0.53
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +1
Query: 334 FLMSWCPDTAXVXXXMLYSSSFDALKKSLXRSSXVHPSDRPLGSVSGGRRREAPRHRSPI 513
FL S+C D A + + SSS + S+ S + LG +S G R + SP+
Sbjct: 1000 FLSSFCDDPAFLIPFVSNSSSSSSPPASIAHSPPSAFTAYSLGGMSSGNRLFSLSASSPV 1059
Query: 514 NSI 522
NS+
Sbjct: 1060 NSV 1062
>U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical
protein F52C9.1b protein.
Length = 1331
Score = 31.5 bits (68), Expect = 0.53
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +1
Query: 334 FLMSWCPDTAXVXXXMLYSSSFDALKKSLXRSSXVHPSDRPLGSVSGGRRREAPRHRSPI 513
FL S+C D A + + SSS + S+ S + LG +S G R + SP+
Sbjct: 1000 FLSSFCDDPAFLIPFVSNSSSSSSPPASIAHSPPSAFTAYSLGGMSSGNRLFSLSASSPV 1059
Query: 514 NSI 522
NS+
Sbjct: 1060 NSV 1062
>Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 280 SKSNRPYXHSPVPPFCRSSRNCSYSALRSPTVST 179
S N P HSP PPF S N SY+ ++ T +T
Sbjct: 188 SHHNIPIRHSPAPPFTTS--NSSYNNIKKSTDNT 219
>Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 280 SKSNRPYXHSPVPPFCRSSRNCSYSALRSPTVST 179
S N P HSP PPF S N SY+ ++ T +T
Sbjct: 188 SHHNIPIRHSPAPPFTTS--NSSYNNIKKSTDNT 219
>AC025723-3|AAK29935.1| 254|Caenorhabditis elegans Hypothetical
protein Y54F10AM.6 protein.
Length = 254
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1
Query: 577 RQGRSVGERVRFRRELVCKCC 515
R+GR G+ ++FR E VC+CC
Sbjct: 196 RKGR--GKNIKFRTEKVCRCC 214
>Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical
protein C01C7.1 protein.
Length = 1043
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 424 RSSXVHPSDRPLGSVSGGRRREAPRHRSPINSIYTRARDETEPA 555
RS L ++S R+ P R P+ ++Y R +D PA
Sbjct: 677 RSPGAISQSTTLTALSSSRKDPIPAPRGPVAAVYARGKDIPTPA 720
>AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related
non-receptor tyrosinekinase protein.
Length = 1043
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 424 RSSXVHPSDRPLGSVSGGRRREAPRHRSPINSIYTRARDETEPA 555
RS L ++S R+ P R P+ ++Y R +D PA
Sbjct: 677 RSPGAISQSTTLTALSSSRKDPIPAPRGPVAAVYARGKDIPTPA 720
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,587,691
Number of Sequences: 27780
Number of extensions: 202751
Number of successful extensions: 664
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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