Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_P24
         (636 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_1029 + 22419046-22419331,22419430-22419461                       33   0.14 
01_03_0131 - 12858377-12858664,12859585-12859975,12863357-128633...    31   0.77 
10_01_0232 + 2456449-2456652,2456814-2456897,2459113-2459201,245...    29   4.1  

>10_08_1029 + 22419046-22419331,22419430-22419461
          Length = 105

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 18/55 (32%), Positives = 24/55 (43%)
 Frame = +1

Query: 262 DVVCDFEANAQFKRDRAVXSEILSILRQRYEDCMMYEQPDHATKCRSLWDKYKSA 426
           D V   E      R++ +  E   I+R R   C   E  +H  KCR L D+Y  A
Sbjct: 25  DPVAMLEYREHLVREKWIQIETAKIIRDRLRWCYRIEGVNHHQKCRHLVDQYLEA 79


>01_03_0131 -
           12858377-12858664,12859585-12859975,12863357-12863397,
           12864745-12865419
          Length = 464

 Score = 31.1 bits (67), Expect = 0.77
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +1

Query: 322 EILSILRQRYEDCMMYEQPDHATKCRSLWDKYKSAEEAWFIKYGD-LGAYGDARKAYMKH 498
           +ILS+LR    D +    PD A    S+W        A+F+  GD L A  + R   ++H
Sbjct: 322 QILSVLRANDADGLQLLLPDAAAAGDSVWVPVPPDPSAFFVNVGDLLQALTNGRLVSIRH 381

Query: 499 K 501
           +
Sbjct: 382 R 382


>10_01_0232 +
           2456449-2456652,2456814-2456897,2459113-2459201,
           2459245-2459452,2459764-2459883,2460004-2460087,
           2460171-2460242,2460342-2460455,2460852-2460952,
           2461024-2461117,2461265-2461432,2461539-2461616,
           2461908-2461973,2462052-2462108,2462353-2462572,
           2462867-2463003,2465379-2465450,2465530-2465577,
           2465681-2465806,2465982-2466047,2466508-2466620,
           2467348-2467432,2467885-2467980,2468067-2468114,
           2468190-2468258,2468393-2468581
          Length = 935

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 409 DKYKSAEEAWFIKYGDLGAYGDARKAY 489
           D   ++ E+W +KY D   Y DA+ AY
Sbjct: 341 DAKHASNESWPLKYDDYFPYADAKNAY 367


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,499,999
Number of Sequences: 37544
Number of extensions: 292728
Number of successful extensions: 703
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)