BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P02_F_P24 (636 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 10_08_1029 + 22419046-22419331,22419430-22419461 33 0.14 01_03_0131 - 12858377-12858664,12859585-12859975,12863357-128633... 31 0.77 10_01_0232 + 2456449-2456652,2456814-2456897,2459113-2459201,245... 29 4.1 >10_08_1029 + 22419046-22419331,22419430-22419461 Length = 105 Score = 33.5 bits (73), Expect = 0.14 Identities = 18/55 (32%), Positives = 24/55 (43%) Frame = +1 Query: 262 DVVCDFEANAQFKRDRAVXSEILSILRQRYEDCMMYEQPDHATKCRSLWDKYKSA 426 D V E R++ + E I+R R C E +H KCR L D+Y A Sbjct: 25 DPVAMLEYREHLVREKWIQIETAKIIRDRLRWCYRIEGVNHHQKCRHLVDQYLEA 79 >01_03_0131 - 12858377-12858664,12859585-12859975,12863357-12863397, 12864745-12865419 Length = 464 Score = 31.1 bits (67), Expect = 0.77 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Frame = +1 Query: 322 EILSILRQRYEDCMMYEQPDHATKCRSLWDKYKSAEEAWFIKYGD-LGAYGDARKAYMKH 498 +ILS+LR D + PD A S+W A+F+ GD L A + R ++H Sbjct: 322 QILSVLRANDADGLQLLLPDAAAAGDSVWVPVPPDPSAFFVNVGDLLQALTNGRLVSIRH 381 Query: 499 K 501 + Sbjct: 382 R 382 >10_01_0232 + 2456449-2456652,2456814-2456897,2459113-2459201, 2459245-2459452,2459764-2459883,2460004-2460087, 2460171-2460242,2460342-2460455,2460852-2460952, 2461024-2461117,2461265-2461432,2461539-2461616, 2461908-2461973,2462052-2462108,2462353-2462572, 2462867-2463003,2465379-2465450,2465530-2465577, 2465681-2465806,2465982-2466047,2466508-2466620, 2467348-2467432,2467885-2467980,2468067-2468114, 2468190-2468258,2468393-2468581 Length = 935 Score = 28.7 bits (61), Expect = 4.1 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = +1 Query: 409 DKYKSAEEAWFIKYGDLGAYGDARKAY 489 D ++ E+W +KY D Y DA+ AY Sbjct: 341 DAKHASNESWPLKYDDYFPYADAKNAY 367 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,499,999 Number of Sequences: 37544 Number of extensions: 292728 Number of successful extensions: 703 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 694 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 703 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1561213104 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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