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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_P22
         (611 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC26A3.04 |rpl2002|rpl20, rpl20-2|60S ribosomal protein L20|Sc...   143   2e-35
SPAC3A12.10 |rpl2001|rpl20-1, rpl20, yl17b, rpl18a-2|60S ribosom...   143   2e-35
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch...    28   0.93 
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro...    28   1.2  
SPCC1682.14 |rpl1902|rpl19-2|60S ribosomal protein L19B|Schizosa...    26   3.7  
SPBC56F2.02 |rpl1901|rpl19-1|60S ribosomal protein L19|Schizosac...    26   4.9  
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch...    26   4.9  
SPAC664.09 |ggt1||gamma-glutamyltranspeptidase Ggt1 |Schizosacch...    25   6.5  
SPBC8D2.05c |sfi1||spindle pole body protein Sfi1|Schizosaccharo...    25   6.5  
SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces...    25   8.6  
SPAC10F6.13c |||aspartate aminotransferase |Schizosaccharomyces ...    25   8.6  

>SPAC26A3.04 |rpl2002|rpl20, rpl20-2|60S ribosomal protein
           L20|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 176

 Score =  143 bits (346), Expect = 2e-35
 Identities = 75/153 (49%), Positives = 94/153 (61%), Gaps = 4/153 (2%)
 Frame = +1

Query: 109 YKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYESR 288
           ++MR+F+P+  VAKSR+WYFL+ + K KK TGEIV               FGIW+RY+SR
Sbjct: 24  FRMRLFAPNESVAKSRYWYFLKMINKVKKATGEIVAINEISEPKPLKAKVFGIWIRYDSR 83

Query: 289 SGVHNMYREYRDLSVXGAVTQCYRDMGARHRARAHSIQIIK-VEVIXAAACRRPQVKQFH 465
           SG HNMY+E+RD +  GAV   Y DM ARHRAR  SI+I+K VEV      RR  VKQ  
Sbjct: 84  SGTHNMYKEFRDTTRVGAVEAMYADMAARHRARFRSIRILKVVEVEKKEDVRRNYVKQLL 143

Query: 466 NSTIRFPLPKR---VHHYKRLNTFAYKRPSTYF 555
           N  ++FPLP R   V        FA  RPST++
Sbjct: 144 NPHLKFPLPHRRTGVVGLAGKKVFAPHRPSTFY 176



 Score = 35.5 bits (78), Expect = 0.006
 Identities = 13/21 (61%), Positives = 19/21 (90%)
 Frame = +3

Query: 45  LREYEVIGRKLPSENEPKPPL 107
           L+EY+V+GRK+P+E+EP P L
Sbjct: 3   LKEYQVVGRKVPTEHEPVPKL 23


>SPAC3A12.10 |rpl2001|rpl20-1, rpl20, yl17b, rpl18a-2|60S ribosomal
           protein L20a|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 176

 Score =  143 bits (346), Expect = 2e-35
 Identities = 75/153 (49%), Positives = 94/153 (61%), Gaps = 4/153 (2%)
 Frame = +1

Query: 109 YKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYESR 288
           ++MR+F+P+  VAKSR+WYFL+ + K KK TGEIV               FGIW+RY+SR
Sbjct: 24  FRMRLFAPNESVAKSRYWYFLKMINKVKKATGEIVAINEISEPKPLKAKVFGIWIRYDSR 83

Query: 289 SGVHNMYREYRDLSVXGAVTQCYRDMGARHRARAHSIQIIK-VEVIXAAACRRPQVKQFH 465
           SG HNMY+E+RD +  GAV   Y DM ARHRAR  SI+I+K VEV      RR  VKQ  
Sbjct: 84  SGTHNMYKEFRDTTRVGAVEAMYADMAARHRARFRSIRILKVVEVEKKEDVRRNYVKQLL 143

Query: 466 NSTIRFPLPKR---VHHYKRLNTFAYKRPSTYF 555
           N  ++FPLP R   V        FA  RPST++
Sbjct: 144 NPHLKFPLPHRRTGVVGLAGKKVFAPHRPSTFY 176



 Score = 35.5 bits (78), Expect = 0.006
 Identities = 13/21 (61%), Positives = 19/21 (90%)
 Frame = +3

Query: 45  LREYEVIGRKLPSENEPKPPL 107
           L+EY+V+GRK+P+E+EP P L
Sbjct: 3   LKEYQVVGRKVPTEHEPVPKL 23


>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
           Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 515

 Score = 28.3 bits (60), Expect = 0.93
 Identities = 19/71 (26%), Positives = 29/71 (40%)
 Frame = +3

Query: 306 VP*IP*PECXWSCHSVLQRYGS*TQSPSSFNTDYQSGSNQXCCVSPSTGQTVPQQHHQIP 485
           +P  P P    +  +VLQ++       SS +      SNQ   +SPST  +    HH   
Sbjct: 68  LPPPPSPGILATSPAVLQKHQQEDSGNSSQSPTSPHPSNQPAMLSPSTAASQHHHHHSSS 127

Query: 486 IAQTCAPLQET 518
            +   +P   T
Sbjct: 128 SSYAVSPTSPT 138


>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
           protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1385

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = +2

Query: 125 SLRIQLSPNLVSGIS*DNLRSSRRPLVKLSLLRKFQRK---APSRLRILVSGYAMSL 286
           S ++   P++V   S D+ + SRRP +  S  RKF  K    PS  + L  G   SL
Sbjct: 295 SPKVSKRPSIVRQDSHDSNKLSRRPTINTSFDRKFSPKLTRTPSLTKSLDPGTPTSL 351


>SPCC1682.14 |rpl1902|rpl19-2|60S ribosomal protein
           L19B|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 193

 Score = 26.2 bits (55), Expect = 3.7
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +2

Query: 131 RIQLSPNLVSGIS*DNLRSSRRPLVKLSLLRKFQRKAPSRLRI 259
           ++ + PN +S IS  N R + R LVK  L+ +      SR RI
Sbjct: 21  KVWMDPNEISEISNANSRQNIRKLVKDGLVIRKPNLMHSRFRI 63


>SPBC56F2.02 |rpl1901|rpl19-1|60S ribosomal protein
           L19|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 193

 Score = 25.8 bits (54), Expect = 4.9
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +2

Query: 131 RIQLSPNLVSGIS*DNLRSSRRPLVKLSLLRKFQRKAPSRLRI 259
           ++ + PN +S IS  N R + R L+K  L+ +      SR RI
Sbjct: 21  KVWMDPNEISEISNANSRQNVRKLIKDGLVIRKPNLMHSRFRI 63


>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 662

 Score = 25.8 bits (54), Expect = 4.9
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -2

Query: 166 NTRNEIWRQLDPERKFSFYSKGGLGSFSDGSLRPITSYS 50
           +T  +      PE   + + +G LG F D S+R   S S
Sbjct: 139 DTMKDAETSASPEATIAVFGRGKLGGFDDQSIRKAKSNS 177


>SPAC664.09 |ggt1||gamma-glutamyltranspeptidase Ggt1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 630

 Score = 25.4 bits (53), Expect = 6.5
 Identities = 21/78 (26%), Positives = 38/78 (48%)
 Frame = -1

Query: 290 ERDS*RSQIPKFLILMGLFSGISLIETISPVVFLNFLSCLRKYQKRDLATIGSGEKILIL 111
           ER S  S +  FL+L G    + +   +SP +F     C  KY+ +     GS +++++ 
Sbjct: 43  ERASRPSILVTFLVLAGTILSLYIWPILSPDLFFANQRCSFKYKNK-----GS-QRVVV- 95

Query: 110 *QGRFGLVLRRELTADNL 57
            +G+ G+V   E T   +
Sbjct: 96  -EGKNGVVATEEETCSQI 112


>SPBC8D2.05c |sfi1||spindle pole body protein
           Sfi1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 840

 Score = 25.4 bits (53), Expect = 6.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 133 DPIVAKSRFWYFLRQLKKFK 192
           D ++   RFWY+L + K F+
Sbjct: 476 DRLIVTFRFWYYLMKAKSFQ 495


>SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces
            pombe|chr 2|||Manual
          Length = 1441

 Score = 25.0 bits (52), Expect = 8.6
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -3

Query: 204  TSGLLELLKLSQEIPETRFGDNWIRRENSH 115
            TSG L LL    E PE+  G+  + R + H
Sbjct: 1274 TSGNLRLLAYDPENPESHSGERLVTRGDFH 1303


>SPAC10F6.13c |||aspartate aminotransferase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 409

 Score = 25.0 bits (52), Expect = 8.6
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -3

Query: 486 WESDGAVVELFDLWTATRSSXDY 418
           WE  G  V+ +  W A   S DY
Sbjct: 145 WEKLGVTVDTYPYWDAKNRSFDY 167


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,561,111
Number of Sequences: 5004
Number of extensions: 51137
Number of successful extensions: 145
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 267622334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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