Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_P22
(611 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a pr... 215 8e-56
BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a ... 215 8e-56
BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a ... 215 8e-56
BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a ... 215 8e-56
AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a ... 215 8e-56
AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a ... 215 8e-56
AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein L18a-... 162 1e-39
X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA ... 158 1e-38
AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a ... 95 2e-19
>L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 215 bits (526), Expect = 8e-56
Identities = 99/151 (65%), Positives = 115/151 (76%)
Frame = +1
Query: 103 PCYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYE 282
P Y+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV NFGIWLRY+
Sbjct: 26 PLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYD 85
Query: 283 SRSGVHNMYREYRDLSVXGAVTQCYRDMGARHRARAHSIQIIKVEVIXAAACRRPQVKQF 462
SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQF
Sbjct: 86 SRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQF 145
Query: 463 HNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 555
H+S I+FPLP RV + F KRP+T+F
Sbjct: 146 HDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
Score = 35.5 bits (78), Expect = 0.15
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3
Query: 27 MKAKGQLREYEVIGRKLPSENEPKPPL 107
MKA G LREY+V+GR LP+ PPL
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPL 27
>BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 215 bits (526), Expect = 8e-56
Identities = 99/151 (65%), Positives = 115/151 (76%)
Frame = +1
Query: 103 PCYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYE 282
P Y+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV NFGIWLRY+
Sbjct: 26 PLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYD 85
Query: 283 SRSGVHNMYREYRDLSVXGAVTQCYRDMGARHRARAHSIQIIKVEVIXAAACRRPQVKQF 462
SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQF
Sbjct: 86 SRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQF 145
Query: 463 HNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 555
H+S I+FPLP RV + F KRP+T+F
Sbjct: 146 HDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
Score = 35.5 bits (78), Expect = 0.15
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3
Query: 27 MKAKGQLREYEVIGRKLPSENEPKPPL 107
MKA G LREY+V+GR LP+ PPL
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPL 27
>BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 215 bits (526), Expect = 8e-56
Identities = 99/151 (65%), Positives = 115/151 (76%)
Frame = +1
Query: 103 PCYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYE 282
P Y+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV NFGIWLRY+
Sbjct: 26 PLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYD 85
Query: 283 SRSGVHNMYREYRDLSVXGAVTQCYRDMGARHRARAHSIQIIKVEVIXAAACRRPQVKQF 462
SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQF
Sbjct: 86 SRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQF 145
Query: 463 HNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 555
H+S I+FPLP RV + F KRP+T+F
Sbjct: 146 HDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
Score = 35.5 bits (78), Expect = 0.15
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3
Query: 27 MKAKGQLREYEVIGRKLPSENEPKPPL 107
MKA G LREY+V+GR LP+ PPL
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPL 27
>BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 215 bits (526), Expect = 8e-56
Identities = 99/151 (65%), Positives = 115/151 (76%)
Frame = +1
Query: 103 PCYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYE 282
P Y+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV NFGIWLRY+
Sbjct: 26 PLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYD 85
Query: 283 SRSGVHNMYREYRDLSVXGAVTQCYRDMGARHRARAHSIQIIKVEVIXAAACRRPQVKQF 462
SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQF
Sbjct: 86 SRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQF 145
Query: 463 HNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 555
H+S I+FPLP RV + F KRP+T+F
Sbjct: 146 HDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
Score = 35.5 bits (78), Expect = 0.15
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3
Query: 27 MKAKGQLREYEVIGRKLPSENEPKPPL 107
MKA G LREY+V+GR LP+ PPL
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPL 27
>AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a
variant protein.
Length = 176
Score = 215 bits (526), Expect = 8e-56
Identities = 99/151 (65%), Positives = 115/151 (76%)
Frame = +1
Query: 103 PCYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYE 282
P Y+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV NFGIWLRY+
Sbjct: 26 PLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYD 85
Query: 283 SRSGVHNMYREYRDLSVXGAVTQCYRDMGARHRARAHSIQIIKVEVIXAAACRRPQVKQF 462
SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQF
Sbjct: 86 SRSGTHNMYREYRDLTAAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQF 145
Query: 463 HNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 555
H+S I+FPLP RV + F KRP+T+F
Sbjct: 146 HDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
Score = 35.5 bits (78), Expect = 0.15
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3
Query: 27 MKAKGQLREYEVIGRKLPSENEPKPPL 107
MKA G LREY+V+GR LP+ PPL
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPL 27
>AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 215 bits (526), Expect = 8e-56
Identities = 99/151 (65%), Positives = 115/151 (76%)
Frame = +1
Query: 103 PCYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXXXXXXNFGIWLRYE 282
P Y+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV NFGIWLRY+
Sbjct: 26 PLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYD 85
Query: 283 SRSGVHNMYREYRDLSVXGAVTQCYRDMGARHRARAHSIQIIKVEVIXAAACRRPQVKQF 462
SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I A+ CRRP VKQF
Sbjct: 86 SRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQF 145
Query: 463 HNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 555
H+S I+FPLP RV + F KRP+T+F
Sbjct: 146 HDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
Score = 35.5 bits (78), Expect = 0.15
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3
Query: 27 MKAKGQLREYEVIGRKLPSENEPKPPL 107
MKA G LREY+V+GR LP+ PPL
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPL 27
>AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein
L18a-like protein protein.
Length = 136
Score = 162 bits (393), Expect = 1e-39
Identities = 79/131 (60%), Positives = 92/131 (70%), Gaps = 3/131 (2%)
Frame = +1
Query: 49 GNMRLSAVSSRRRTSPNL---PCYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXX 219
G +R V RR +P P Y+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE V
Sbjct: 5 GTLREYKVVGRRLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGETVYC 64
Query: 220 XXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVXGAVTQCYRDMGARHRARAHSI 399
NFGIWLR +SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSI
Sbjct: 65 GQVFEKSPLRVKNFGIWLRCDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSI 124
Query: 400 QIIKVEVIXAA 432
QI+ VE I A+
Sbjct: 125 QIMMVEEIAAS 135
Score = 37.5 bits (83), Expect = 0.037
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 27 MKAKGQLREYEVIGRKLPSENEPKPPL 107
MKA G LREY+V+GR+LP+ PPL
Sbjct: 1 MKASGTLREYKVVGRRLPTPKCHTPPL 27
>X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA for
ORF. ).
Length = 140
Score = 158 bits (384), Expect = 1e-38
Identities = 71/100 (71%), Positives = 80/100 (80%)
Frame = +1
Query: 256 NFGIWLRYESRSGVHNMYREYRDLSVXGAVTQCYRDMGARHRARAHSIQIIKVEVIXAAA 435
NFGIWL Y+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I +
Sbjct: 41 NFGIWLSYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAVSK 100
Query: 436 CRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 555
CRRP VKQFH+S I+FPLP RV + F KRP+T+F
Sbjct: 101 CRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 140
>AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a
protein.
Length = 66
Score = 94.7 bits (225), Expect = 2e-19
Identities = 44/66 (66%), Positives = 51/66 (77%)
Frame = +1
Query: 358 RDMGARHRARAHSIQIIKVEVIXAAACRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYK 537
RDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV + F K
Sbjct: 1 RDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTK 60
Query: 538 RPSTYF 555
RP+T+F
Sbjct: 61 RPNTFF 66
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,132,728
Number of Sequences: 237096
Number of extensions: 1811037
Number of successful extensions: 3857
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3857
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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