Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_P20
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99942-7|CAB17070.2|  462|Caenorhabditis elegans Hypothetical pr...    64   1e-10
Z82285-8|CAB05297.2|  393|Caenorhabditis elegans Hypothetical pr...    56   3e-08
Z50863-1|CAA90736.3|  353|Caenorhabditis elegans Hypothetical pr...    36   0.033
AF016451-4|AAB65996.1|  388|Caenorhabditis elegans Activated in ...    28   6.6  
AF016451-5|AAB65995.1|  438|Caenorhabditis elegans Activated in ...    27   8.7  
AF016451-3|AAB66001.1|  388|Caenorhabditis elegans Prion-like-(q...    27   8.7  

>Z99942-7|CAB17070.2|  462|Caenorhabditis elegans Hypothetical
           protein H13N06.5 protein.
          Length = 462

 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 49/150 (32%), Positives = 62/150 (41%), Gaps = 9/150 (6%)
 Frame = +1

Query: 130 HSHSHSDE--SPAFKYSKHANEQKEHDK----IYEPXYNLYVSALCSTXXXXXXXXXXXX 291
           H HSH D   S   + +K   ++ ++      + +    L+V A+ +T            
Sbjct: 118 HGHSHEDHGHSHGAESAKQVGDEYQYTGFLSFLNDAKTRLWVYAISATLLISAAPCFILM 177

Query: 292 XXXXXG-TIEKQPLLKILLAFASGGLLGDAFLHLIPHALMPHNDKQG--XXXXXXXXXGT 462
                  T E  PLLK+LLAF SGGLLGDAFLHLIPHA  P  D  G           G 
Sbjct: 178 FIPIQANTSESGPLLKVLLAFGSGGLLGDAFLHLIPHA-TPAGDGHGHSHSHGHSHGGGG 236

Query: 463 QEHGPHDXXXXXXXXXXXXXXXXXEKTVRL 552
             HG HD                 EK VR+
Sbjct: 237 HSHGAHDMSVGGWVLGGIIAFLTVEKLVRI 266


>Z82285-8|CAB05297.2|  393|Caenorhabditis elegans Hypothetical
           protein T28F3.3 protein.
          Length = 393

 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 23/31 (74%), Positives = 27/31 (87%)
 Frame = +1

Query: 325 PLLKILLAFASGGLLGDAFLHLIPHALMPHN 417
           P LKILLAF +GGLLGDA LH+IPH+L PH+
Sbjct: 113 PFLKILLAFGAGGLLGDALLHIIPHSLSPHD 143


>Z50863-1|CAA90736.3|  353|Caenorhabditis elegans Hypothetical
           protein C14H10.1 protein.
          Length = 353

 Score = 35.5 bits (78), Expect = 0.033
 Identities = 16/27 (59%), Positives = 18/27 (66%)
 Frame = +1

Query: 322 QPLLKILLAFASGGLLGDAFLHLIPHA 402
           Q  L +LL FA G LL D FLHL+P A
Sbjct: 144 QRRLNLLLGFAIGSLLADVFLHLLPEA 170


>AF016451-4|AAB65996.1|  388|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 6 protein.
          Length = 388

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +3

Query: 372 RCVPAFNTSCTHASQRQTRA*SQSFPFSRNPRTWST*HNSRSWSTWWNYYVFSCGKNCQ 548
           +C PA NT C+   Q+  +A  Q +  + N  T +  +N  + +T  N    +C   CQ
Sbjct: 218 QCEPACNTQCSDICQQTAQATQQVYNQNMNQNTNTQMYNPYNTNTSQN---ANCAPACQ 273


>AF016451-5|AAB65995.1|  438|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 7 protein.
          Length = 438

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +3

Query: 372 RCVPAFNTSCTHASQRQTRA*SQSFPFSRNPRTWST*HNSRSWSTWWNYYVFSCGKNCQ 548
           +C PA NT C+   Q+  +A  Q +  + N  T +  +N  + +T  N    +C   CQ
Sbjct: 218 QCEPACNTQCSDICQQTAQATQQVYNQNMNQNTNTQMYNPYNTNTNQN---ANCAPACQ 273


>AF016451-3|AAB66001.1|  388|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 5
           protein.
          Length = 388

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +3

Query: 372 RCVPAFNTSCTHASQRQTRA*SQSFPFSRNPRTWST*HNSRSWSTWWNYYVFSCGKNCQ 548
           +C PA NT C+   Q+  +A  Q +  + N  T +  +N  + +T  N    +C   CQ
Sbjct: 218 QCEPACNTQCSDICQQTAQATQQVYNQNMNQNTNTQMYNPYNTNTNQN---ANCAPACQ 273


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,521,426
Number of Sequences: 27780
Number of extensions: 284191
Number of successful extensions: 763
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)