BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P02_F_P19 (653 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 100 4e-22 SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 93 2e-20 SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 83 3e-17 SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 57 2e-09 SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 55 1e-08 SPAC15A10.08 |ain1||alpha-actinin|Schizosaccharomyces pombe|chr ... 33 0.036 SPAC1565.07c |||TATA binding protein interacting protein |Schizo... 29 0.77 SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 27 2.4 SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyce... 25 9.5 >SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pombe|chr 1|||Manual Length = 141 Score = 99.5 bits (237), Expect = 4e-22 Identities = 51/134 (38%), Positives = 79/134 (58%) Frame = +1 Query: 172 FQEAFQLFDSRGDGKIHVAXIGDALRALGQNPTESDVKKCTLHLKPDERISFEVFLPIYQ 351 +++AF LFD G G+I IGD LRA GQNPT +++ + L P E + E FL + Sbjct: 8 YKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTL-PAE-VDMEQFLQVLN 65 Query: 352 AISKARSGDTANDFIEGLRHFDKDGNGFISSAELRHLLSTLGXKLXDDEVXQLLQGXXXS 531 + +F++G + FDKD G I ELR++L++LG KL ++E+ +LL+G Sbjct: 66 RPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK 125 Query: 532 XGNINYENFVHLIM 573 G +NY +FV +I+ Sbjct: 126 DGMVNYHDFVQMIL 139 Score = 26.2 bits (55), Expect = 4.1 Identities = 12/38 (31%), Positives = 20/38 (52%) Frame = +1 Query: 169 EFQEAFQLFDSRGDGKIHVAXIGDALRALGQNPTESDV 282 EF + FQ+FD G I V + L +LG+ + ++ Sbjct: 78 EFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEM 115 >SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 150 Score = 93.5 bits (222), Expect = 2e-20 Identities = 52/143 (36%), Positives = 81/143 (56%), Gaps = 3/143 (2%) Frame = +1 Query: 151 SEDQLAEFQEAFQLFDSRGDGKIHVAXIGDALRALGQNPTESDVKKCTLHLKPDER--IS 324 +++Q+AEF+EAF LFD DG I +G +R+LGQ+PT ++++ + D I Sbjct: 7 TDEQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTID 66 Query: 325 FEVFLPIYQAISKARSGDTANDFIEGLRHFDKDGNGFISSAELRHLLSTLGXKLXDDEVX 504 F FL + K + D + E + FDKDGNG+I+ EL H+L++LG +L +EV Sbjct: 67 FTEFLTMMAR--KMKDTDNEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVA 124 Query: 505 QLL-QGXXXSXGNINYENFVHLI 570 ++ + G INYE F +I Sbjct: 125 DMIREADTDGDGVINYEEFSRVI 147 >SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces pombe|chr 1|||Manual Length = 143 Score = 83.4 bits (197), Expect = 3e-17 Identities = 48/142 (33%), Positives = 81/142 (57%), Gaps = 1/142 (0%) Frame = +1 Query: 151 SEDQLAEFQEAFQLFDSRGDGKIHVAXIGDALRALGQNPTESDVKKCTLHLKPDERISFE 330 S++Q E +EAF L+D DG I + +G LR+LG N T++++ K + L + I + Sbjct: 4 SKEQTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNEL--GDAIDEK 61 Query: 331 VFLPIYQAISKARSGDTANDFIEGLRHFDKDGNGFISSAELRHLLSTLGXKLXDDEVXQL 510 F+ +K R ++ ++I+ R FDKD +G+I +A+ + TLG KL D+EV + Sbjct: 62 KFMSFVS--NKLRETESEEEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLM 119 Query: 511 LQ-GXXXSXGNINYENFVHLIM 573 +Q + G+ +Y +FV IM Sbjct: 120 VQEADPTNSGSFDYYDFVQRIM 141 Score = 34.7 bits (76), Expect = 0.012 Identities = 16/65 (24%), Positives = 34/65 (52%) Frame = +1 Query: 169 EFQEAFQLFDSRGDGKIHVAXIGDALRALGQNPTESDVKKCTLHLKPDERISFEVFLPIY 348 E+ +AF++FD G I A D ++ LG+ ++++V+ P SF+ + + Sbjct: 79 EYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEADPTNSGSFDYYDFVQ 138 Query: 349 QAISK 363 + ++K Sbjct: 139 RIMAK 143 >SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccharomyces pombe|chr 1|||Manual Length = 184 Score = 57.2 bits (132), Expect = 2e-09 Identities = 42/143 (29%), Positives = 64/143 (44%) Frame = +1 Query: 142 AGYSEDQLAEFQEAFQLFDSRGDGKIHVAXIGDALRALGQNPTESDVKKCTLHLKPDERI 321 A + Q+ E +EAF L D GDG I + L +L Q+ +E + + P I Sbjct: 40 AQLTSSQIQELKEAFALLDKDGDGNIGREDVKTMLTSLNQDASEDSINHMFESINPP--I 97 Query: 322 SFEVFLPIYQAISKARSGDTANDFIEGLRHFDKDGNGFISSAELRHLLSTLGXKLXDDEV 501 + FL ++ S ND +E FD +G I + +R LS++G ++ EV Sbjct: 98 NLAAFLTAMGSMLCRIS--PRNDLLEAFSTFDDTQSGKIPISTMRDALSSMGDRMDPQEV 155 Query: 502 XQLLQGXXXSXGNINYENFVHLI 570 +L+ S G YE FV I Sbjct: 156 ESILRS-YTSHGVFYYEKFVDAI 177 >SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Manual Length = 176 Score = 54.8 bits (126), Expect = 1e-08 Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 3/144 (2%) Frame = +1 Query: 151 SEDQLAEFQEAFQLFDSRGDGKIHVAXIGDALRALGQNPTESDVKKCTLHLKPDER--IS 324 +E+Q + EAF+LFDS D I + A+RALG N +S+V K + + Sbjct: 32 TEEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQ 91 Query: 325 FEVFLPIYQAISKARSGDTANDFIEGLRHFDKDGNGFISSAELRHLLSTLGXKLXDDEVX 504 E F+ + K D + FD D G IS LR + L + D E+ Sbjct: 92 MEDFVRV--MTEKIVERDPLEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQELE 149 Query: 505 QLLQG-XXXSXGNINYENFVHLIM 573 +++ G IN + F+ ++M Sbjct: 150 AMIEEFDLDQDGEINEQEFIAIMM 173 >SPAC15A10.08 |ain1||alpha-actinin|Schizosaccharomyces pombe|chr 1|||Manual Length = 621 Score = 33.1 bits (72), Expect = 0.036 Identities = 15/57 (26%), Positives = 26/57 (45%) Frame = +1 Query: 406 RHFDKDGNGFISSAELRHLLSTLGXKLXDDEVXQLLQGXXXSXGNINYENFVHLIMQ 576 RHF+K + ++ E L++LG +E L S + YE F ++M+ Sbjct: 494 RHFEKKKSNMLNEVEFYAALASLGLVYDTEEGTALFHRAANSEEGVTYERFTEIVME 550 >SPAC1565.07c |||TATA binding protein interacting protein |Schizosaccharomyces pombe|chr 1|||Manual Length = 1220 Score = 28.7 bits (61), Expect = 0.77 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 3/84 (3%) Frame = +1 Query: 328 EVFLPIYQAISKARSGDTANDFI--EGLRHFDKDGNGFISS-AELRHLLSTLGXKLXDDE 498 ++F+ + I+K +G + I + RH DK GN F ++ EL +L +G K + Sbjct: 643 DIFMSVTD-ITKIENGTKIYEEILQDCCRHIDKSGNEFTTAYLELLEVLLKVGQKYLAES 701 Query: 499 VXQLLQGXXXSXGNINYENFVHLI 570 + + + G N EN V ++ Sbjct: 702 LLEHILGLLIETLKRNTENTVAIL 725 >SPAC1687.14c |||EF hand family protein, unknown role|Schizosaccharomyces pombe|chr 1|||Manual Length = 76 Score = 27.1 bits (57), Expect = 2.4 Identities = 18/64 (28%), Positives = 30/64 (46%) Frame = +1 Query: 169 EFQEAFQLFDSRGDGKIHVAXIGDALRALGQNPTESDVKKCTLHLKPDERISFEVFLPIY 348 E +EAF LFD G I + + LG+N T+ ++ + ++S E F ++ Sbjct: 13 EAEEAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLMLDLAGTNGKVSREEFAELW 72 Query: 349 QAIS 360 IS Sbjct: 73 IHIS 76 >SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1131 Score = 25.0 bits (52), Expect = 9.5 Identities = 8/14 (57%), Positives = 10/14 (71%) Frame = +3 Query: 429 WVHLFCGTATPALY 470 WVHL C + TP +Y Sbjct: 927 WVHLICASWTPDVY 940 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,354,381 Number of Sequences: 5004 Number of extensions: 43941 Number of successful extensions: 138 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 124 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 129 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 295793106 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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