BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P02_F_P17 (653 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q9NPE3 Cluster: H/ACA ribonucleoprotein complex subunit... 103 3e-21 UniRef50_Q9V5P6 Cluster: H/ACA ribonucleoprotein complex subunit... 101 2e-20 UniRef50_Q93XX8 Cluster: H/ACA ribonucleoprotein complex subunit... 81 2e-14 UniRef50_Q019V2 Cluster: H/ACA snoRNP complex, subunit NOP10; n=... 73 6e-12 UniRef50_A2EP66 Cluster: Nucleolar RNA-binding protein, putative... 51 2e-05 UniRef50_UPI0000498FA1 Cluster: conserved hypothetical protein; ... 47 3e-04 UniRef50_Q2FPD6 Cluster: Nucleolar RNA-binding protein Nop10p; n... 45 0.001 UniRef50_A6UUW5 Cluster: Nucleolar RNA-binding protein Nop10p; n... 42 0.013 UniRef50_Q97Z78 Cluster: Ribosome biogenesis protein Nop10; n=2;... 41 0.030 UniRef50_Q8U1R4 Cluster: Ribosome biogenesis protein Nop10; n=7;... 36 0.64 UniRef50_A0B683 Cluster: Nucleolar RNA-binding protein Nop10p; n... 36 1.1 UniRef50_Q8TT00 Cluster: Ribosome biogenesis protein Nop10; n=7;... 36 1.1 UniRef50_Q3YAJ1 Cluster: Nucleolar protein family A, member 3; n... 35 1.5 UniRef50_Q8ZTY6 Cluster: Ribosome biogenesis protein Nop10; n=4;... 35 1.5 UniRef50_Q4SA99 Cluster: Chromosome 19 SCAF14691, whole genome s... 35 2.0 UniRef50_Q05E71 Cluster: Small nucleolar RNP protein Nop10p; n=3... 35 2.0 UniRef50_Q8TY85 Cluster: Ribosome biogenesis protein Nop10; n=2;... 33 6.0 >UniRef50_Q9NPE3 Cluster: H/ACA ribonucleoprotein complex subunit 3; n=25; Eukaryota|Rep: H/ACA ribonucleoprotein complex subunit 3 - Homo sapiens (Human) Length = 64 Score = 103 bits (248), Expect = 3e-21 Identities = 44/63 (69%), Positives = 53/63 (84%) Frame = +1 Query: 115 MYLRYYLNDKGDREYTLXTIDPFGKPTLSAHPARFSPEDKYSRHRIIIKKRFGLLLTQQP 294 M+L+YYLN++GDR YTL DP G+ T SAHPARFSP+DKYSRHRI IKKRF +L+TQQP Sbjct: 1 MFLQYYLNEQGDRVYTLKKFDPMGQQTCSAHPARFSPDDKYSRHRITIKKRFKVLMTQQP 60 Query: 295 EPI 303 P+ Sbjct: 61 RPV 63 >UniRef50_Q9V5P6 Cluster: H/ACA ribonucleoprotein complex subunit 3; n=13; Eukaryota|Rep: H/ACA ribonucleoprotein complex subunit 3 - Drosophila melanogaster (Fruit fly) Length = 64 Score = 101 bits (241), Expect = 2e-20 Identities = 46/64 (71%), Positives = 52/64 (81%) Frame = +1 Query: 115 MYLRYYLNDKGDREYTLXTIDPFGKPTLSAHPARFSPEDKYSRHRIIIKKRFGLLLTQQP 294 MYL Y +N+ GDR YTL G+PTLSAHPARFSPEDKYSR R+ IKKRFGLLLTQ+P Sbjct: 1 MYLMYTINENGDRVYTLKKRTEDGRPTLSAHPARFSPEDKYSRQRLTIKKRFGLLLTQKP 60 Query: 295 EPIH 306 EPI+ Sbjct: 61 EPIY 64 >UniRef50_Q93XX8 Cluster: H/ACA ribonucleoprotein complex subunit 3-like protein; n=35; Eukaryota|Rep: H/ACA ribonucleoprotein complex subunit 3-like protein - Arabidopsis thaliana (Mouse-ear cress) Length = 64 Score = 81.4 bits (192), Expect = 2e-14 Identities = 35/58 (60%), Positives = 45/58 (77%) Frame = +1 Query: 115 MYLRYYLNDKGDREYTLXTIDPFGKPTLSAHPARFSPEDKYSRHRIIIKKRFGLLLTQ 288 MYL+ Y+N+KG++ YT P G T SAHPARFSP+DKYS+ R+++KKRFGLL TQ Sbjct: 1 MYLQCYINEKGEKVYTTKKESPLGLATESAHPARFSPDDKYSKQRVLLKKRFGLLPTQ 58 >UniRef50_Q019V2 Cluster: H/ACA snoRNP complex, subunit NOP10; n=2; Eukaryota|Rep: H/ACA snoRNP complex, subunit NOP10 - Ostreococcus tauri Length = 91 Score = 72.9 bits (171), Expect = 6e-12 Identities = 38/72 (52%), Positives = 46/72 (63%), Gaps = 13/72 (18%) Frame = +1 Query: 118 YLRYYLNDKGDREYTLXTID-------------PFGKPTLSAHPARFSPEDKYSRHRIII 258 YL YY ++KG+R YTL P G PT SAHPARFSP+DK+S+ R+ + Sbjct: 16 YLMYYTDEKGERVYTLKVRSAKRRKPRAGDKTAPDGTPTHSAHPARFSPDDKFSKQRVAL 75 Query: 259 KKRFGLLLTQQP 294 KKRFGLL TQQP Sbjct: 76 KKRFGLLPTQQP 87 >UniRef50_A2EP66 Cluster: Nucleolar RNA-binding protein, putative; n=2; Trichomonas vaginalis G3|Rep: Nucleolar RNA-binding protein, putative - Trichomonas vaginalis G3 Length = 83 Score = 51.2 bits (117), Expect = 2e-05 Identities = 28/50 (56%), Positives = 32/50 (64%), Gaps = 1/50 (2%) Frame = +1 Query: 151 REYTLXTIDP-FGKPTLSAHPARFSPEDKYSRHRIIIKKRFGLLLTQQPE 297 ++YTL P G T SAHPARFSPEDK S RI K +F LL QQP+ Sbjct: 31 KQYTLKQKCPRCGGQTRSAHPARFSPEDKNSAERIQTKAKFNLLPYQQPD 80 >UniRef50_UPI0000498FA1 Cluster: conserved hypothetical protein; n=1; Entamoeba histolytica HM-1:IMSS|Rep: conserved hypothetical protein - Entamoeba histolytica HM-1:IMSS Length = 59 Score = 47.2 bits (107), Expect = 3e-04 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%) Frame = +1 Query: 121 LRYYLNDKGDREYTLXTIDPFGKPTL-SAHPARFSPEDKYSRHRIIIKKRFGLLLT 285 L YY ++ ++YT+ T P + SAHPA+FSP D YS++RI KK FGLL T Sbjct: 2 LLYYCDNC--KQYTMKTECPQCNGYVRSAHPAKFSPVDPYSKYRIATKKEFGLLPT 55 >UniRef50_Q2FPD6 Cluster: Nucleolar RNA-binding protein Nop10p; n=1; Methanospirillum hungatei JF-1|Rep: Nucleolar RNA-binding protein Nop10p - Methanospirillum hungatei (strain JF-1 / DSM 864) Length = 49 Score = 45.2 bits (102), Expect = 0.001 Identities = 19/39 (48%), Positives = 28/39 (71%), Gaps = 1/39 (2%) Frame = +1 Query: 148 DREYTLX-TIDPFGKPTLSAHPARFSPEDKYSRHRIIIK 261 D YTL T GKPT++ HPAR+SP+D+Y ++R +I+ Sbjct: 11 DNLYTLSETCSSCGKPTITPHPARYSPDDRYGKYRRMIR 49 >UniRef50_A6UUW5 Cluster: Nucleolar RNA-binding protein Nop10p; n=1; Methanococcus aeolicus Nankai-3|Rep: Nucleolar RNA-binding protein Nop10p - Methanococcus aeolicus Nankai-3 Length = 51 Score = 41.9 bits (94), Expect = 0.013 Identities = 17/38 (44%), Positives = 26/38 (68%) Frame = +1 Query: 151 REYTLXTIDPFGKPTLSAHPARFSPEDKYSRHRIIIKK 264 + YTL TI G+ T++ P R+SP DKY ++R ++KK Sbjct: 10 KNYTLNTICQCGEKTITVKPPRYSPTDKYGKYRRMLKK 47 >UniRef50_Q97Z78 Cluster: Ribosome biogenesis protein Nop10; n=2; Sulfolobus|Rep: Ribosome biogenesis protein Nop10 - Sulfolobus solfataricus Length = 56 Score = 40.7 bits (91), Expect = 0.030 Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = +1 Query: 148 DREYTLX-TIDPFGKPTLSAHPARFSPEDKYSRHRIIIKK 264 D YT T G T+ HP+RFSPEDKY ++RI +KK Sbjct: 11 DNIYTFKDTCQICGSKTVIPHPSRFSPEDKYVKYRIELKK 50 >UniRef50_Q8U1R4 Cluster: Ribosome biogenesis protein Nop10; n=7; Archaea|Rep: Ribosome biogenesis protein Nop10 - Pyrococcus furiosus Length = 60 Score = 36.3 bits (80), Expect = 0.64 Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 1/32 (3%) Frame = +1 Query: 157 YTLXTIDPF-GKPTLSAHPARFSPEDKYSRHR 249 YTL + P G+ T AHP RFSPED Y +R Sbjct: 14 YTLKEVCPVCGEKTKVAHPPRFSPEDPYGEYR 45 >UniRef50_A0B683 Cluster: Nucleolar RNA-binding protein Nop10p; n=1; Methanosaeta thermophila PT|Rep: Nucleolar RNA-binding protein Nop10p - Methanosaeta thermophila (strain DSM 6194 / PT) (Methanothrixthermophila (strain DSM 6194 / PT)) Length = 60 Score = 35.5 bits (78), Expect = 1.1 Identities = 18/34 (52%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Frame = +1 Query: 151 REYTLXTIDP-FGKPTLSAHPARFSPEDKYSRHR 249 R YTL P G T PARFSPED+Y R+R Sbjct: 13 RLYTLKETCPRCGSHTTGTKPARFSPEDRYGRYR 46 >UniRef50_Q8TT00 Cluster: Ribosome biogenesis protein Nop10; n=7; Euryarchaeota|Rep: Ribosome biogenesis protein Nop10 - Methanosarcina acetivorans Length = 51 Score = 35.5 bits (78), Expect = 1.1 Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Frame = +1 Query: 157 YTLXTIDPF-GKPTLSAHPARFSPEDKYSRHRIIIKK 264 YTL P G TL A PARFSP+D Y ++R + KK Sbjct: 14 YTLREKCPVCGGVTLPAIPARFSPQDPYGKYRRLAKK 50 >UniRef50_Q3YAJ1 Cluster: Nucleolar protein family A, member 3; n=2; Deuterostomia|Rep: Nucleolar protein family A, member 3 - Macaca mulatta (Rhesus macaque) Length = 25 Score = 35.1 bits (77), Expect = 1.5 Identities = 15/24 (62%), Positives = 18/24 (75%) Frame = +1 Query: 232 KYSRHRIIIKKRFGLLLTQQPEPI 303 KY R RI IKKRF + +TQQP P+ Sbjct: 1 KYFRPRIPIKKRFKVFMTQQPRPV 24 >UniRef50_Q8ZTY6 Cluster: Ribosome biogenesis protein Nop10; n=4; Archaea|Rep: Ribosome biogenesis protein Nop10 - Pyrobaculum aerophilum Length = 72 Score = 35.1 bits (77), Expect = 1.5 Identities = 14/25 (56%), Positives = 18/25 (72%) Frame = +1 Query: 205 HPARFSPEDKYSRHRIIIKKRFGLL 279 HP +FSPEDKY ++RI+ K G L Sbjct: 32 HPPKFSPEDKYQKYRILQKLLMGKL 56 >UniRef50_Q4SA99 Cluster: Chromosome 19 SCAF14691, whole genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 19 SCAF14691, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 874 Score = 34.7 bits (76), Expect = 2.0 Identities = 12/33 (36%), Positives = 23/33 (69%) Frame = +3 Query: 357 DTF*QFFSKSKAHRIXHTTEHKWSYKIYYFIMT 455 DTF F K+ AHR+ H+ + ++++ +YF+M+ Sbjct: 587 DTFPLEFDKTSAHRVRHSEDMQFAFSYFYFLMS 619 >UniRef50_Q05E71 Cluster: Small nucleolar RNP protein Nop10p; n=3; Desulfurococcaceae|Rep: Small nucleolar RNP protein Nop10p - Aeropyrum pernix Length = 58 Score = 34.7 bits (76), Expect = 2.0 Identities = 12/32 (37%), Positives = 22/32 (68%) Frame = +1 Query: 184 GKPTLSAHPARFSPEDKYSRHRIIIKKRFGLL 279 G P HP RFSP++++ ++R ++K+ GL+ Sbjct: 25 GGPVAVPHPPRFSPDNRFIKYRYELQKKLGLI 56 >UniRef50_Q8TY85 Cluster: Ribosome biogenesis protein Nop10; n=2; Euryarchaeota|Rep: Ribosome biogenesis protein Nop10 - Methanopyrus kandleri Length = 66 Score = 33.1 bits (72), Expect = 6.0 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = +1 Query: 205 HPARFSPEDKYSRHRIIIKKR 267 HP RFSPED Y ++R +KKR Sbjct: 32 HPHRFSPEDPYGKYRRKLKKR 52 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 584,142,600 Number of Sequences: 1657284 Number of extensions: 11059629 Number of successful extensions: 19126 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 18684 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 19126 length of database: 575,637,011 effective HSP length: 98 effective length of database: 413,223,179 effective search space used: 49173558301 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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