Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_P17
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.3  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.1  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   6.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 290 CCVSSRPNLFLIIILCLEYLS 228
           CC     N+ L+ +LCL+Y +
Sbjct: 183 CCAFIFFNMHLLFLLCLDYFT 203


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 115 MYLRYYLNDKGDREYTLXTIDPFG 186
           +Y  +Y++DK  R  +L  +D  G
Sbjct: 179 LYYSFYISDKAARPRSLQFVDSEG 202


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
 Frame = -1

Query: 269 NLFLIIILCLEYLSSGE--KRAGCADNVGFPNG 177
           NL ++   C  Y   G   K  GC+DN GF  G
Sbjct: 6   NLGIMHRHCFGYPFQGTTYKYTGCSDNDGFLPG 38


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,608
Number of Sequences: 336
Number of extensions: 3113
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)