Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_P17
         (653 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC063023-1|AAH63023.1|   64|Homo sapiens NOLA3 protein protein.       103   4e-22
BC008886-1|AAH08886.1|   64|Homo sapiens nucleolar protein famil...   103   4e-22
AB043104-1|BAA96133.1|   64|Homo sapiens Nop10p protein.              103   4e-22
AB043103-1|BAA96107.1|   64|Homo sapiens Nop10p protein.              103   4e-22

>BC063023-1|AAH63023.1|   64|Homo sapiens NOLA3 protein protein.
          Length = 64

 Score =  103 bits (248), Expect = 4e-22
 Identities = 44/63 (69%), Positives = 53/63 (84%)
 Frame = +1

Query: 115 MYLRYYLNDKGDREYTLXTIDPFGKPTLSAHPARFSPEDKYSRHRIIIKKRFGLLLTQQP 294
           M+L+YYLN++GDR YTL   DP G+ T SAHPARFSP+DKYSRHRI IKKRF +L+TQQP
Sbjct: 1   MFLQYYLNEQGDRVYTLKKFDPMGQQTCSAHPARFSPDDKYSRHRITIKKRFKVLMTQQP 60

Query: 295 EPI 303
            P+
Sbjct: 61  RPV 63


>BC008886-1|AAH08886.1|   64|Homo sapiens nucleolar protein family
           A, member 3 (H/ACA small nucleolar RNPs) protein.
          Length = 64

 Score =  103 bits (248), Expect = 4e-22
 Identities = 44/63 (69%), Positives = 53/63 (84%)
 Frame = +1

Query: 115 MYLRYYLNDKGDREYTLXTIDPFGKPTLSAHPARFSPEDKYSRHRIIIKKRFGLLLTQQP 294
           M+L+YYLN++GDR YTL   DP G+ T SAHPARFSP+DKYSRHRI IKKRF +L+TQQP
Sbjct: 1   MFLQYYLNEQGDRVYTLKKFDPMGQQTCSAHPARFSPDDKYSRHRITIKKRFKVLMTQQP 60

Query: 295 EPI 303
            P+
Sbjct: 61  RPV 63


>AB043104-1|BAA96133.1|   64|Homo sapiens Nop10p protein.
          Length = 64

 Score =  103 bits (248), Expect = 4e-22
 Identities = 44/63 (69%), Positives = 53/63 (84%)
 Frame = +1

Query: 115 MYLRYYLNDKGDREYTLXTIDPFGKPTLSAHPARFSPEDKYSRHRIIIKKRFGLLLTQQP 294
           M+L+YYLN++GDR YTL   DP G+ T SAHPARFSP+DKYSRHRI IKKRF +L+TQQP
Sbjct: 1   MFLQYYLNEQGDRVYTLKKFDPMGQQTCSAHPARFSPDDKYSRHRITIKKRFKVLMTQQP 60

Query: 295 EPI 303
            P+
Sbjct: 61  RPV 63


>AB043103-1|BAA96107.1|   64|Homo sapiens Nop10p protein.
          Length = 64

 Score =  103 bits (248), Expect = 4e-22
 Identities = 44/63 (69%), Positives = 53/63 (84%)
 Frame = +1

Query: 115 MYLRYYLNDKGDREYTLXTIDPFGKPTLSAHPARFSPEDKYSRHRIIIKKRFGLLLTQQP 294
           M+L+YYLN++GDR YTL   DP G+ T SAHPARFSP+DKYSRHRI IKKRF +L+TQQP
Sbjct: 1   MFLQYYLNEQGDRVYTLKKFDPMGQQTCSAHPARFSPDDKYSRHRITIKKRFKVLMTQQP 60

Query: 295 EPI 303
            P+
Sbjct: 61  RPV 63


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,426,123
Number of Sequences: 237096
Number of extensions: 1707981
Number of successful extensions: 2332
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2332
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)