Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_P13
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    24   1.3  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    24   1.3  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    24   1.3  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      22   3.8  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    22   5.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.1  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   6.7  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   6.7  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   8.9  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   8.9  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 365 RHHIRVINRHAHYFSNSIRFQ 303
           RHH  V + H H+F +  ++Q
Sbjct: 117 RHHEEVADGHQHHFLHENKYQ 137


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 365 RHHIRVINRHAHYFSNSIRFQ 303
           RHH  V + H H+F +  ++Q
Sbjct: 117 RHHEEVADGHQHHFLHENKYQ 137


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 365 RHHIRVINRHAHYFSNSIRFQ 303
           RHH  V + H H+F +  ++Q
Sbjct: 117 RHHEEVADGHQHHFLHENKYQ 137


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -2

Query: 224 YNLLSRRQLTNIHLTSGRIFE*ISSRQLIPD 132
           YN   +RQ  +I L SGR      S  L+ D
Sbjct: 157 YNPSQKRQFLHITLASGRTLTVTPSHLLVLD 187


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 18/65 (27%), Positives = 26/65 (40%)
 Frame = +3

Query: 408 LADPSGNFIKALDLGTNLPPLGGFRSKRFSMVIVDSXVQDLNVEPDGTGLSCSLADXIKV 587
           LA P   +    D   NL  +   +S R +   V+  ++     PDG  L   L D +K 
Sbjct: 16  LARPEDQYTIKYD-NVNLKEI--LQSDRLTENYVNCLLEKKPCTPDGEELKRVLPDALKT 72

Query: 588 KYAXC 602
             A C
Sbjct: 73  SCAKC 77


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 369  KPPSHTGH*QTRT 331
            +PPS T H QT+T
Sbjct: 1175 RPPSTTNHWQTKT 1187


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +3

Query: 345 NDPYVMAAWGAXHNTKGKVRMLADPS 422
           N PY        H   G + +LADPS
Sbjct: 348 NTPYHTPEPDCIHELLGHMPLLADPS 373


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +3

Query: 240 GAFTPGCSKTHLPGYVQNADKLKSDGVAEIVCVSVND 350
           G F  G   T   GY  +  K K  G   IV +S++D
Sbjct: 383 GGFWVGYEDTDTAGYKASYVKAKGLGGIAIVDLSLDD 419


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 540 PDGTGLSCSLADXIKVKYAXCN 605
           PDG  L  +LAD ++   + C+
Sbjct: 56  PDGQELKNNLADALQTSCSKCS 77


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 540 PDGTGLSCSLADXIKVKYAXCN 605
           PDG  L  +LAD ++   + C+
Sbjct: 56  PDGQELKNNLADALQTSCSKCS 77


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,773
Number of Sequences: 336
Number of extensions: 3430
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)