BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P02_F_P13 (654 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC330.06c |||thioredoxin peroxidase|Schizosaccharomyces pombe|... 90 2e-19 SPBC1773.02c |||thioredoxin peroxidase|Schizosaccharomyces pombe... 52 7e-08 SPAC328.03 |tps1||alpha,alpha-trehalose-phosphate synthase [UDP-... 27 2.4 SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 26 4.1 SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 26 5.5 SPAPB8E5.03 |mae1||malic acid transport protein Mae1 |Schizosacc... 26 5.5 SPBC646.02 |cwf11||complexed with Cdc5 protein Cwf11 |Schizosacc... 26 5.5 SPAC3F10.06c |||initiator methionine tRNA 2'-O-ribosyl phosphate... 26 5.5 >SPCC330.06c |||thioredoxin peroxidase|Schizosaccharomyces pombe|chr 3|||Manual Length = 156 Score = 90.2 bits (214), Expect = 2e-19 Identities = 54/155 (34%), Positives = 83/155 (53%), Gaps = 3/155 (1%) Frame = +3 Query: 126 IKVGDQLPAADLFEDSPASKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKL 305 + VG LP L+E+ P V E + K ++ VPGAFTP CS + +PGY+ N + Sbjct: 2 VAVGSTLPKVTLWENKPEEVV---EFPSQGKFIIVGVPGAFTPPCS-SQVPGYIANEKQF 57 Query: 306 KSDGVAEIVCVSVNDPYVMAAWGAXHN--TKGKVRMLADPSGNFIKALDLGTNLPP-LGG 476 + G++ I V+VND +V AW + + V +AD +G F KA D G + LG Sbjct: 58 AAKGISGIYVVAVNDVFVTKAWKKSFDGGEQSGVHFVADWNGEFTKAFDAGFDASGLLGP 117 Query: 477 FRSKRFSMVIVDSXVQDLNVEPDGTGLSCSLADXI 581 RSKR++ V+ + V + +E + T + S AD + Sbjct: 118 LRSKRYAAVVENGKVVKVFIENEVTDVDISSADKV 152 >SPBC1773.02c |||thioredoxin peroxidase|Schizosaccharomyces pombe|chr 2|||Manual Length = 195 Score = 52.0 bits (119), Expect = 7e-08 Identities = 34/106 (32%), Positives = 55/106 (51%) Frame = +3 Query: 126 IKVGDQLPAADLFEDSPASKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKL 305 I+VGD +P L D + + + ++TA K +V+FA P A TPGC+K G+ N K+ Sbjct: 46 IQVGDVIPDITL-PDEDGTSIRLRDITANKGLVIFAYPKASTPGCTKQGC-GFRDNYPKI 103 Query: 306 KSDGVAEIVCVSVNDPYVMAAWGAXHNTKGKVRMLADPSGNFIKAL 443 ++ E++ +S + A+ N +L+DP G IK L Sbjct: 104 QASDY-EVLGLSFDTSKAQKAFKDKQNF--PYHLLSDPKGELIKKL 146 >SPAC328.03 |tps1||alpha,alpha-trehalose-phosphate synthase [UDP-forming]|Schizosaccharomyces pombe|chr 1|||Manual Length = 513 Score = 27.1 bits (57), Expect = 2.4 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = -2 Query: 332 HYFSNSIRFQFICVLYVSRQVCFRTSRGEG 243 H+ S+RF+ + LY VC TS +G Sbjct: 365 HFLHKSVRFEELVALYNVSDVCLITSTRDG 394 >SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces pombe|chr 1|||Manual Length = 492 Score = 26.2 bits (55), Expect = 4.1 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Frame = +3 Query: 180 SKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKLKSDGVA--EIVCVSVND 350 +K + EL KV++ + C K P Y AD+L+ DG++ E+ C D Sbjct: 28 NKEGLNELITADKVLMVKFYAPWCGHC-KALAPEYESAADELEKDGISLVEVDCTEEGD 85 >SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces pombe|chr 1|||Manual Length = 855 Score = 25.8 bits (54), Expect = 5.5 Identities = 8/26 (30%), Positives = 16/26 (61%) Frame = +2 Query: 50 YPWHYRIHQSSVSASTSHFTIKHGTN 127 +P + H +S+S+ HF+++H N Sbjct: 653 FPQALKAHMNSISSPKRHFSLRHKKN 678 >SPAPB8E5.03 |mae1||malic acid transport protein Mae1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 438 Score = 25.8 bits (54), Expect = 5.5 Identities = 11/40 (27%), Positives = 20/40 (50%) Frame = +1 Query: 34 HRALRLSVALPHSPIERQREHFTFHN*AWHQLRSGISCLL 153 H L +V PH P+ ++ +HFT+ A G+ ++ Sbjct: 13 HELLDWNVKAPHVPLSQRLKHFTWSWFACTMATGGVGLII 52 >SPBC646.02 |cwf11||complexed with Cdc5 protein Cwf11 |Schizosaccharomyces pombe|chr 2|||Manual Length = 1284 Score = 25.8 bits (54), Expect = 5.5 Identities = 8/24 (33%), Positives = 17/24 (70%) Frame = -2 Query: 320 NSIRFQFICVLYVSRQVCFRTSRG 249 NSI+ F+C++Y+S+ + ++ G Sbjct: 522 NSIKSPFLCLIYISKDMEYKLLHG 545 >SPAC3F10.06c |||initiator methionine tRNA 2'-O-ribosyl phosphate transferase |Schizosaccharomyces pombe|chr 1|||Manual Length = 453 Score = 25.8 bits (54), Expect = 5.5 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = +2 Query: 23 LMFLTGLFDYPWHYRIHQSSVSASTSHFT 109 LM L +D H H S+SAS SH T Sbjct: 384 LMILCLYYDLHMHLLAHPISLSASQSHLT 412 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,620,900 Number of Sequences: 5004 Number of extensions: 53888 Number of successful extensions: 143 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 138 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 142 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 295793106 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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