Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_P13
(654 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0811 + 24830496-24831194 130 9e-31
01_06_0234 - 27739272-27739525,27739810-27739889,27740894-27741048 128 3e-30
02_01_0691 - 5167260-5167937 127 7e-30
01_01_1148 - 9113728-9113835,9113952-9114035,9114831-9114992,911... 103 9e-23
07_03_1427 + 26495072-26495148,26495323-26495468,26495581-264957... 44 8e-05
06_03_0012 + 15383628-15383823,15383915-15384100,15384326-15385518 33 0.26
09_06_0228 + 21706118-21706252,21706327-21706406,21706742-217068... 31 0.80
11_03_0128 - 10437407-10438049,10438097-10438272 29 2.4
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034 29 2.4
08_01_0627 + 5451140-5451839,5452635-5452662,5452730-5452786,545... 29 2.4
06_01_0861 + 6527279-6527582,6527619-6527719,6527817-6528042,652... 29 2.4
06_01_0671 - 4899611-4899829,4900870-4901448 29 2.4
06_03_1406 - 29949367-29949556,29949753-29949837,29950625-299507... 29 4.3
04_04_1571 + 34504087-34504421,34505002-34505731,34506091-345120... 29 4.3
08_02_1402 - 26786011-26786128,26786263-26786516,26787505-267877... 28 5.6
01_06_0928 + 33085403-33089224 28 5.6
08_02_1430 - 27048055-27048408,27049674-27049841,27049927-270500... 28 7.5
11_06_0265 - 21788531-21789798,21789914-21789947 27 9.9
04_04_1073 - 30606472-30606515,30606897-30606988,30607152-306072... 27 9.9
>06_03_0811 + 24830496-24831194
Length = 232
Score = 130 bits (314), Expect = 9e-31
Identities = 74/175 (42%), Positives = 108/175 (61%), Gaps = 7/175 (4%)
Frame = +3
Query: 81 ASARALHISQLSMAPIKVGDQLPAADL-FEDSPASK---VNICELTAGKKVVLFAVPGAF 248
A RA+ S + A I VGD+LP A L + DSP + V + +LTAGKKVVLFAVPGAF
Sbjct: 56 APRRAVSASAPAAATIAVGDKLPDATLSYFDSPDGELKTVTVRDLTAGKKVVLFAVPGAF 115
Query: 249 TPGCSKTHLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAWGAXHNTKGKVRMLADPSGN 428
TP C++ H+PG+V A +L++ GV + CVSVND +VM AW +V +L+D +G
Sbjct: 116 TPTCTQKHVPGFVAKAGELRAKGVDAVACVSVNDAFVMRAWKESLGVGDEVLLLSDGNGE 175
Query: 429 FIKALDLGTNL--PPLG-GFRSKRFSMVIVDSXVQDLNVEPDGTGLSCSLADXIK 584
+A+ + +L P G G RS+R++++ D V+ LN+E G + S + +K
Sbjct: 176 LARAMGVELDLSDKPAGLGVRSRRYALLAEDGVVKVLNLEEGGAFTTSSAEEMLK 230
>01_06_0234 - 27739272-27739525,27739810-27739889,27740894-27741048
Length = 162
Score = 128 bits (310), Expect = 3e-30
Identities = 68/148 (45%), Positives = 93/148 (62%), Gaps = 4/148 (2%)
Frame = +3
Query: 117 MAPIKVGDQLPAADL--FE-DSPASKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYV 287
MAP+ VGD LP L F+ + +V++ L AGKKVVLF VPGAFTP CS H+PG++
Sbjct: 1 MAPVAVGDTLPDGQLGWFDGEDKLQQVSVHGLAAGKKVVLFGVPGAFTPTCSNQHVPGFI 60
Query: 288 QNADKLKSDGVAEIVCVSVNDPYVMAAWGAXHNTKGKVRMLADPSGNFIKALDLGTNLPP 467
A++LK+ GV +I+ VSVNDP+VM AW + V+ LAD G + KAL L +L
Sbjct: 61 NQAEQLKAKGVDDILLVSVNDPFVMKAWAKSYPENKHVKFLADGLGTYTKALGLELDLSE 120
Query: 468 LG-GFRSKRFSMVIVDSXVQDLNVEPDG 548
G G RS+RF+++ + V N+E G
Sbjct: 121 KGLGIRSRRFALLADNLKVTVANIEEGG 148
>02_01_0691 - 5167260-5167937
Length = 225
Score = 127 bits (307), Expect = 7e-30
Identities = 78/199 (39%), Positives = 112/199 (56%), Gaps = 8/199 (4%)
Frame = +3
Query: 12 TSTF*CFSQGSSIIRGITAFTNRASARALHISQLSMAPIKVGDQLPAADLFEDSPAS--- 182
TS+F + G+ A RA+ R+ + +A I VGD+LP A L PA
Sbjct: 25 TSSFSLSFSSRPLATGVRAAGARAARRSAASASTVVATIAVGDKLPDATLSYFDPADGEL 84
Query: 183 -KVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKLKSDGVAEIVCVSVNDPYV 359
V + ELTAG+K VLFAVPGAFTP CS+ HLPG+++ A +L + GV I CVSVND +V
Sbjct: 85 KTVTVAELTAGRKAVLFAVPGAFTPTCSQKHLPGFIEKAGELHAKGVDAIACVSVNDAFV 144
Query: 360 MAAWGAXHNT-KGKVRMLADPSGNFIKALDLGTNL--PPLG-GFRSKRFSMVIVDSXVQD 527
M AW V +L+D + +AL + +L P+G G RS+R++++ D V+
Sbjct: 145 MRAWKESLGLGDADVLLLSDGNLELTRALGVEMDLSDKPMGLGVRSRRYALLADDGVVKV 204
Query: 528 LNVEPDGTGLSCSLADXIK 584
LN+E G + S + +K
Sbjct: 205 LNLEEGGAFTTSSAEEMLK 223
>01_01_1148 -
9113728-9113835,9113952-9114035,9114831-9114992,
9115120-9115224,9115584-9116216,9117412-9117496,
9118426-9118520,9119083-9119241,9119968-9119997,
9120100-9120306
Length = 555
Score = 103 bits (248), Expect = 9e-23
Identities = 50/111 (45%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Frame = +3
Query: 210 GKKVVLFAVPGAFTPGCSKTHLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAWGAXHNT 389
GKKVV+F +PGA+T CS+ H+P Y N DKLK+ GV ++CVSVNDPY + W
Sbjct: 70 GKKVVIFGLPGAYTGVCSQAHVPSYKNNIDKLKAKGVDSVICVSVNDPYALNGWAEKLQA 129
Query: 390 KGKVRMLADPSGNFIKALDLGTNL-PPLGGFRSKRFSMVIVDSXVQDLNVE 539
K + D G+F K+LDL +L L G RS R+S + D ++ NVE
Sbjct: 130 KDAIEFYGDFDGSFHKSLDLEVDLSAALLGRRSHRWSAFVDDGKIKAFNVE 180
>07_03_1427 +
26495072-26495148,26495323-26495468,26495581-26495729,
26495829-26496224
Length = 255
Score = 44.4 bits (100), Expect = 8e-05
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Frame = +3
Query: 75 NRASARALHISQLSMAPIKVGDQLPAADLFEDSPASKVNICELTAGKKVVLFAVPGAFTP 254
+ SA+A S ++M + +GD +P +L DS K+ I + V+LF+ PG FTP
Sbjct: 23 HETSAKAAQ-SFVAMPGLTIGDTVPNLEL--DSTHGKIRIHDFVGDTYVILFSHPGDFTP 79
Query: 255 GCSK--THLPGYVQNADKLKSDGVAEIVC--VSVNDPYVMAAWGAXHNTKGKVRMLADPS 422
C+ + GY + DK + + I C V + ++ + ++ADPS
Sbjct: 80 VCTTELAAMAGYAKEFDK-RGVKLLGISCDDVQSHKDWIKDIEAYKPGNRVTYPIMADPS 138
Query: 423 GNFIKALDL 449
IK L++
Sbjct: 139 REAIKQLNM 147
>06_03_0012 + 15383628-15383823,15383915-15384100,15384326-15385518
Length = 524
Score = 32.7 bits (71), Expect = 0.26
Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 9/98 (9%)
Frame = +3
Query: 165 EDSPASKVNICELTAG------KKVVLFAVP---GAFTPGCSKTHLPGYVQNADKLKSDG 317
E P ++ +CELT +K + F P GAF K P Y + D L G
Sbjct: 145 EGFPYARPPVCELTGDIRISPKEKTMFFVNPSSAGAFDGNGEKKIRP-YARKDDFLLP-G 202
Query: 318 VAEIVCVSVNDPYVMAAWGAXHNTKGKVRMLADPSGNF 431
V E++ SV+ P + A HN V +A + NF
Sbjct: 203 VVEVIIKSVSSPAIAPACTRTHNVPAVVFSVAGYTDNF 240
>09_06_0228 +
21706118-21706252,21706327-21706406,21706742-21706866,
21706960-21707084,21707162-21707380,21707458-21707580,
21707661-21707761,21707847-21707899,21707972-21708174
Length = 387
Score = 31.1 bits (67), Expect = 0.80
Identities = 21/73 (28%), Positives = 31/73 (42%)
Frame = -2
Query: 617 LQCDITXCVLHFDXIGERTRQASAIGLHIQILDXAVNDDHREPFGAETSERRQIGAQVQS 438
+ C I HF + A +G + I+ AV D+ PFG ++S R +G S
Sbjct: 92 IACRILKPPQHFRGMIIAFCSAGNLGNLLLIVVPAVCDEDGNPFGKDSSRCRSLGLSYSS 151
Query: 437 LDEVAAGIG*HTH 399
L G+ TH
Sbjct: 152 LSMALGGLYIWTH 164
>11_03_0128 - 10437407-10438049,10438097-10438272
Length = 272
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 412 PIPAATSSRLWTWAPICRRSEVSAPKGSRWSSLTA 516
P P A+S L +W C RS +S+P S W TA
Sbjct: 233 PSPTASSESLGSWGSGC-RSHLSSPTCSSWWRTTA 266
>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
Length = 930
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 465 PLGGFRSKRFSMVIVDSXVQDLNVEPDGTGLSCSLADXI 581
PL G S F+ +I S +Q +V+ DGT SC + D I
Sbjct: 456 PLEGVGSAYFNELINRSMIQPADVQYDGTVQSCRVHDMI 494
>08_01_0627 +
5451140-5451839,5452635-5452662,5452730-5452786,
5453205-5453874
Length = 484
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = -1
Query: 297 LRSVRIPASVF*NIPG*RRPAPQIIQPSFPPSTHKYSPY*RENLRINQQQAADPRP 130
LR + A++ P +P PQ+ PSFP +T S R R + DP+P
Sbjct: 13 LRDAQSAAALSNPNPPEPQPQPQLATPSFPTTTDTASRRRRRRRRRGRGNRHDPQP 68
>06_01_0861 +
6527279-6527582,6527619-6527719,6527817-6528042,
6528132-6528475,6528624-6528989,6529080-6529347,
6529479-6529696
Length = 608
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +3
Query: 231 AVPGAFTPGCSKTHLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAW-GAXHNT 389
A+ G P C H+ + K +S V V + YV+A W G+ H++
Sbjct: 140 ALDGTHIPACVPMHMQDRFRGRKKFQSQNVLAAVDFDLRFLYVLAGWEGSAHDS 193
>06_01_0671 - 4899611-4899829,4900870-4901448
Length = 265
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 210 GKKVVLFAVPGAFTPGCSKTHLPGYVQNADKLKSDGVAEIVCVSVND 350
G+ VV++ P TPGC+K + + +K K G AE++ +S +D
Sbjct: 144 GRPVVVYFYPADETPGCTK-QACAFRDSYEKFKKAG-AEVIGISGDD 188
>06_03_1406 -
29949367-29949556,29949753-29949837,29950625-29950791,
29951232-29952049
Length = 419
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 102 ISQLSMAPIKVGDQLPAADLFEDSPASKVN-ICELTAGKKVVLFAVPGA 245
+S +AP+++G P++ + SPA+ V+ + VL +PGA
Sbjct: 32 LSMADLAPVQIGPSSPSSPMSPASPATPVDAYANAPPPSEDVLLRIPGA 80
>04_04_1571 +
34504087-34504421,34505002-34505731,34506091-34512077,
34512493-34513964,34514114-34514377,34514761-34514978,
34515759-34516030,34516190-34516559,34516578-34516797,
34516819-34518931,34518941-34519193,34519269-34519401,
34520597-34521114,34521207-34522115,34522195-34522368,
34522833-34522882,34523963-34524035,34524413-34524477,
34524736-34525522,34525622-34525878,34525989-34526109,
34526315-34526956
Length = 5320
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +2
Query: 2 DSKNFYLLMFLTGLFDYPWHYRIHQSSVSASTS---HFTIKHGT 124
DSK Y ++ TGL++ PW + Q TS H IK GT
Sbjct: 434 DSKISYYSLWPTGLYEEPWSILVEQICKFIYTSPVFHSEIKGGT 477
>08_02_1402 -
26786011-26786128,26786263-26786516,26787505-26787732,
26788920-26789759
Length = 479
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = -1
Query: 573 RRENKTGQCHRAPHSDLGXCCQR*PSRTFWSGNLRAAADWCPGPEP 436
RRE +T H PHSDL R P RT + + R P P P
Sbjct: 187 RREAETAHPHTQPHSDLS---PRTPRRTSAAASGRLQEKQAPPPLP 229
>01_06_0928 + 33085403-33089224
Length = 1273
Score = 28.3 bits (60), Expect = 5.6
Identities = 25/87 (28%), Positives = 38/87 (43%)
Frame = -3
Query: 568 REQDRPVPSGSTFRSWTLLSTMTIENLLERKPPSGGRLVPRSRALMKLPLGSASIRTFPL 389
+E+D + T +W + + K SG LVP S L +L L S SI L
Sbjct: 900 KERDEALVKEDTIEAWLCCHKERMRFIYSAK--SGLPLVPPS-GLCELYLSSCSITDGAL 956
Query: 388 VLX*APQAAITYGSLTDTHTISATPSD 308
L ++ SLT+ T++ PS+
Sbjct: 957 ALCIGGLTSLRELSLTNIMTLTTLPSE 983
>08_02_1430 -
27048055-27048408,27049674-27049841,27049927-27050042,
27050153-27050305,27050850-27050993,27051052-27051211,
27051332-27051970
Length = 577
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -3
Query: 274 KCVLEHPGVKAPGTANNTTFFPAVNSQIFTLLAGESSNKSAAG 146
K VLEHP +K TA N + AV +++ A K A G
Sbjct: 362 KQVLEHPWLKNADTAPNVSLGDAVRARLQQFSAMNKFKKKALG 404
>11_06_0265 - 21788531-21789798,21789914-21789947
Length = 433
Score = 27.5 bits (58), Expect = 9.9
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = +3
Query: 252 PGCSKTHLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAWGAXHNTKGKVRMLADPSGNF 431
P + TH G +Q + + S+G E+VC D Y MA + A + A S +
Sbjct: 147 PSPTATHSCGAIQRSVPV-SNGDGEVVCTIHADEYAMALYKAVLSAPPN----AGSSSSS 201
Query: 432 IKALDLGTN 458
LDLG++
Sbjct: 202 SSELDLGSS 210
>04_04_1073 -
30606472-30606515,30606897-30606988,30607152-30607243,
30607362-30607469,30607614-30607748,30607826-30607871,
30608320-30608420,30608512-30608649,30608721-30608819,
30608920-30609036,30609941-30610102,30610271-30610330,
30611120-30611216,30611238-30611296,30611364-30611480,
30611922-30612020,30612115-30612180,30612405-30612542,
30612659-30612742,30612820-30612892,30612937-30612992,
30613074-30613182,30613253-30613335,30613406-30613489,
30613679-30613750,30613827-30613904,30613984-30614067,
30614142-30614212,30614497-30614566,30614866-30614955,
30615046-30615177,30615250-30615350,30615634-30615691,
30615762-30615878,30617981-30618133
Length = 1094
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 117 MAPIKVGDQLPAADLFEDSPASKVNICELTAGKKVV 224
+ P+K+GDQ+PA + + V+ +T K+V
Sbjct: 284 VVPLKIGDQVPADGILISGHSLSVDESSMTGESKIV 319
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,607,292
Number of Sequences: 37544
Number of extensions: 434490
Number of successful extensions: 1053
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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