Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_P13
(654 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g65980.1 68414.m07486 peroxiredoxin type 2, putative strong s... 135 2e-32
At1g60740.1 68414.m06838 peroxiredoxin type 2, putative strong s... 134 5e-32
At1g65970.1 68414.m07485 peroxiredoxin type 2, putative strong s... 134 6e-32
At3g52960.1 68416.m05838 peroxiredoxin type 2, putative similar ... 127 7e-30
At1g65990.1 68414.m07488 type 2 peroxiredoxin-related / thiol sp... 108 3e-24
At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol spe... 98 5e-21
At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putati... 42 4e-04
At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to pe... 32 0.29
At5g46250.2 68418.m05694 RNA recognition motif (RRM)-containing ... 31 0.51
At5g46250.1 68418.m05693 RNA recognition motif (RRM)-containing ... 31 0.51
At2g33240.1 68415.m04072 myosin, putative similar to myosin (GI:... 30 1.5
At1g18740.1 68414.m02337 expressed protein 29 2.7
At5g52440.1 68418.m06507 HCF106 protein identical to HCF106 [Ara... 29 3.6
At3g02890.1 68416.m00284 PHD finger protein-related contains low... 29 3.6
At2g06420.1 68415.m00711 expressed protein 27 8.2
>At1g65980.1 68414.m07486 peroxiredoxin type 2, putative strong
similarity to type 2 peroxiredoxin [Brassica rapa subsp.
pekinensis] GI:4928472; contains Pfam profile: PF00578
AhpC/TSA (alkyl hydroperoxide reductase and
thiol-specific antioxidant) family
Length = 162
Score = 135 bits (327), Expect = 2e-32
Identities = 71/160 (44%), Positives = 96/160 (60%), Gaps = 4/160 (2%)
Frame = +3
Query: 117 MAPIKVGDQLPAADLF---EDSPASKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYV 287
MAPI VGD +P + E+ ++ L AGKKV+LF VPGAFTP CS H+PG++
Sbjct: 1 MAPIAVGDVVPDGTISFFDENDQLQTASVHSLAAGKKVILFGVPGAFTPTCSMKHVPGFI 60
Query: 288 QNADKLKSDGVAEIVCVSVNDPYVMAAWGAXHNTKGKVRMLADPSGNFIKALDLGTNLPP 467
+ A++LKS GV EI+C SVNDP+VM AWG + V+ +AD SG + L L +L
Sbjct: 61 EKAEELKSKGVDEIICFSVNDPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDLKD 120
Query: 468 LG-GFRSKRFSMVIVDSXVQDLNVEPDGTGLSCSLADXIK 584
G G RS+RF++++ D V NVE G S D +K
Sbjct: 121 KGLGVRSRRFALLLDDLKVTVANVESGGEFTVSSADDILK 160
>At1g60740.1 68414.m06838 peroxiredoxin type 2, putative strong
similarity to type 2 peroxiredoxin [Brassica rapa subsp.
pekinensis] GI:4928472; contains Pfam profile: PF00578
AhpC/TSA (alkyl hydroperoxide reductase and
thiol-specific antioxidant) family
Length = 162
Score = 134 bits (324), Expect = 5e-32
Identities = 69/160 (43%), Positives = 97/160 (60%), Gaps = 4/160 (2%)
Frame = +3
Query: 117 MAPIKVGDQLPAADLF---EDSPASKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYV 287
MAPI VGD +P + E+ V++ + AGKKV+LF VPGAFTP CS +H+PG++
Sbjct: 1 MAPITVGDVVPDGTISFFDENDQLQTVSVHSIAAGKKVILFGVPGAFTPTCSMSHVPGFI 60
Query: 288 QNADKLKSDGVAEIVCVSVNDPYVMAAWGAXHNTKGKVRMLADPSGNFIKALDLGTNLPP 467
A++LKS G+ EI+C SVNDP+VM AWG + V+ +AD SG + L L +L
Sbjct: 61 GKAEELKSKGIDEIICFSVNDPFVMKAWGKTYQENKHVKFVADGSGEYTHLLGLELDLKD 120
Query: 468 LG-GFRSKRFSMVIVDSXVQDLNVEPDGTGLSCSLADXIK 584
G G RS+RF++++ + V NVE G S D +K
Sbjct: 121 KGLGIRSRRFALLLDNLKVTVANVENGGEFTVSSAEDILK 160
>At1g65970.1 68414.m07485 peroxiredoxin type 2, putative strong
similarity to type 2 peroxiredoxin [Brassica rapa subsp.
pekinensis] GI:4928472; contains Pfam profile: PF00578
AhpC/TSA (alkyl hydroperoxide reductase and
thiol-specific antioxidant) family
Length = 162
Score = 134 bits (323), Expect = 6e-32
Identities = 69/160 (43%), Positives = 97/160 (60%), Gaps = 4/160 (2%)
Frame = +3
Query: 117 MAPIKVGDQLPAADLF---EDSPASKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYV 287
MAPI VGD +P + E+ V++ + AGKKV+LF VPGAFTP CS +H+PG++
Sbjct: 1 MAPITVGDVVPDGTISFFDENDQLQTVSVHSIAAGKKVILFGVPGAFTPTCSMSHVPGFI 60
Query: 288 QNADKLKSDGVAEIVCVSVNDPYVMAAWGAXHNTKGKVRMLADPSGNFIKALDLGTNLPP 467
A++LKS G+ EI+C SVNDP+VM AWG + V+ +AD SG + L L +L
Sbjct: 61 GKAEELKSKGIDEIICFSVNDPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDLKD 120
Query: 468 LG-GFRSKRFSMVIVDSXVQDLNVEPDGTGLSCSLADXIK 584
G G RS+RF++++ + V NVE G S D +K
Sbjct: 121 KGLGIRSRRFALLLDNLKVTVANVESGGEFTVSSAEDILK 160
>At3g52960.1 68416.m05838 peroxiredoxin type 2, putative similar to
type 2 peroxiredoxin [Brassica rapa subsp. pekinensis]
GI:4928472; contains Pfam profile: PF00578 AhpC/TSA
(alkyl hydroperoxide reductase and thiol-specific
antioxidant) family
Length = 234
Score = 127 bits (306), Expect = 7e-30
Identities = 73/179 (40%), Positives = 105/179 (58%), Gaps = 8/179 (4%)
Frame = +3
Query: 72 TNRASARALHISQLSM-APIKVGDQLPAADLFEDSPAS----KVNICELTAGKKVVLFAV 236
TN ASA + + A I VGD+LP + L P++ V + LTAGKK +LFAV
Sbjct: 54 TNSASATTRSFATTPVTASISVGDKLPDSTLSYLDPSTGDVKTVTVSSLTAGKKTILFAV 113
Query: 237 PGAFTPGCSKTHLPGYVQNADKLKSDGVAEIVCVSVNDPYVMAAWGAXHNTKGKVRMLAD 416
PGAFTP CS+ H+PG+V A +L+S G+ I C+SVND +VM AW +V +L+D
Sbjct: 114 PGAFTPTCSQKHVPGFVSKAGELRSKGIDVIACISVNDAFVMEAWRKDLGINDEVMLLSD 173
Query: 417 PSGNFIKALDLGTNL--PPLG-GFRSKRFSMVIVDSXVQDLNVEPDGTGLSCSLADXIK 584
+G F L + +L P+G G RS+R++++ D V+ LN+E G + S D +K
Sbjct: 174 GNGEFTGKLGVELDLRDKPVGLGVRSRRYAILADDGVVKVLNLEEGGAFTNSSAEDMLK 232
>At1g65990.1 68414.m07488 type 2 peroxiredoxin-related / thiol
specific antioxidant / mal allergen family protein
similar to type 2 peroxiredoxin [Brassica rapa subsp.
pekinensis] GI:4928472; contains Pfam profiles PF00646:
F-box domain, PF00578: AhpC/TSA family
Length = 553
Score = 108 bits (260), Expect = 3e-24
Identities = 62/161 (38%), Positives = 97/161 (60%), Gaps = 4/161 (2%)
Frame = +3
Query: 117 MAPIKVGDQLPAADLF---EDSPASKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYV 287
MAPI VGD +P + +D V++ L AGKKV+LF VPGAF P CS H+ G++
Sbjct: 1 MAPIDVGDFVPDGSISFFDDDDQLQTVSVHSLAAGKKVILFGVPGAFPPTCSMNHVNGFI 60
Query: 288 QNADKLKSDGVAEIVCVSVNDPYVMAAWGAXHNTKGKVRMLADPSGNFIKALDLGTNLPP 467
+ A++LKS+GV EI+C+S +DP+++ A + V+ + D SG +I+ L L +
Sbjct: 61 EKAEELKSNGVDEIICLSGDDPFMITACSENKH----VKFVEDGSGEYIQLLGLELEVKD 116
Query: 468 LG-GFRSKRFSMVIVDSXVQDLNVEPDGTGLSCSLADXIKV 587
G G RS+ F++++ + V +NV G+G CSL +K+
Sbjct: 117 KGLGVRSRGFALLLDNLKVIVVNV---GSGGDCSLFQLMKM 154
>At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol
specific antioxidant (AhpC/TSA)/mal allergen family
protein identical to SP|Q9M7T0 Putative peroxiredoxin,
mitochondrial precursor {Arabidopsis thaliana}; similar
to thioredoxin peroxidase [Capsicum annuum] GI:18654477;
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 201
Score = 97.9 bits (233), Expect = 5e-21
Identities = 51/139 (36%), Positives = 79/139 (56%), Gaps = 4/139 (2%)
Frame = +3
Query: 135 GDQLPAADLFEDSPASKVN---ICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKL 305
G L A +++ +SK + + ++ GKKVV+F +PGA+T CS+ H+P Y + DK
Sbjct: 45 GVSLQKARSWDEGVSSKFSTTPLSDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKF 104
Query: 306 KSDGVAEIVCVSVNDPYVMAAWGAXHNTKGKVRMLADPSGNFIKALDLGTNL-PPLGGFR 482
K+ G+ ++CVSVNDP+ + W K + D G F K+L L +L L G R
Sbjct: 105 KAKGIDSVICVSVNDPFAINGWAEKLGAKDAIEFYGDFDGKFHKSLGLDKDLSAALLGPR 164
Query: 483 SKRFSMVIVDSXVQDLNVE 539
S+R+S + D V+ +NVE
Sbjct: 165 SERWSAYVEDGKVKAVNVE 183
>At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putative
identical to peroxiredoxin (Rehydrin homolog)
[Arabidopsis thaliana] SWISS-PROT:O04005; contains Pfam
profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase
and thiol-specific antioxidant) family
Length = 216
Score = 41.9 bits (94), Expect = 4e-04
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 5/151 (3%)
Frame = +3
Query: 117 MAPIKVGDQLPAADLFEDSPASKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQNA 296
M I +GD +P ++ ++ K + + A VLF+ PG FTP C+ T L + A
Sbjct: 1 MPGITLGDTVPNLEV--ETTHDKFKLHDYFANSWTVLFSHPGDFTPVCT-TELGAMAKYA 57
Query: 297 DKLKSDGVAEIVCVSVNDPYVMAAW-----GAXHNTKGKVRMLADPSGNFIKALDLGTNL 461
+ GV +++ +S +D W H +K ++ADP+ I L++ +
Sbjct: 58 HEFDKRGV-KLLGLSCDDVQSHKDWIKDIEAFNHGSKVNYPIIADPNKEIIPQLNM---I 113
Query: 462 PPLGGFRSKRFSMVIVDSXVQDLNVEPDGTG 554
P+ S+ +V DS ++ + P TG
Sbjct: 114 DPIENGPSRALHIVGPDSKIKLSFLYPSTTG 144
>At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to
peroxiredoxin Q [Sedum lineare] GI:6899842; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 216
Score = 32.3 bits (70), Expect = 0.29
Identities = 25/80 (31%), Positives = 39/80 (48%)
Frame = +3
Query: 111 LSMAPIKVGDQLPAADLFEDSPASKVNICELTAGKKVVLFAVPGAFTPGCSKTHLPGYVQ 290
L A + G P L +D V++ + GK VVL+ P TPGC+K +
Sbjct: 64 LIFAKVNKGQAAPDFTL-KDQNGKPVSLKKYK-GKPVVLYFYPADETPGCTK-QACAFRD 120
Query: 291 NADKLKSDGVAEIVCVSVND 350
+ +K K G AE++ +S +D
Sbjct: 121 SYEKFKKAG-AEVIGISGDD 139
>At5g46250.2 68418.m05694 RNA recognition motif (RRM)-containing
protein contains similarity to RNA-binding protein;
contains InterPro entry IPR000504: RNA-binding region
RNP-1 (RNA recognition motif) (RRM)
Length = 420
Score = 31.5 bits (68), Expect = 0.51
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 359 DGGLGSSXQH*RKGAYASRSQRQLHQGSGPGHQSAAARRFPLQKVLDGHR*QQXPRSECG 538
DGG ++ KG + +RQ HQG G GH +A++ P ++ + PR G
Sbjct: 338 DGGNHQKDKNGNKGRVVGQGRRQNHQG-GNGHGTASSSSHPNYHPVEVSKRPPGPRMPDG 396
Query: 539 AR 544
R
Sbjct: 397 TR 398
>At5g46250.1 68418.m05693 RNA recognition motif (RRM)-containing
protein contains similarity to RNA-binding protein;
contains InterPro entry IPR000504: RNA-binding region
RNP-1 (RNA recognition motif) (RRM)
Length = 422
Score = 31.5 bits (68), Expect = 0.51
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 359 DGGLGSSXQH*RKGAYASRSQRQLHQ-GSGPGHQSAAARRFPLQKVLDGHR*QQXPRSEC 535
DGG ++ KG + +RQ HQ G+G GH +A++ P ++ + PR
Sbjct: 338 DGGNHQKDKNGNKGRVVGQGRRQNHQGGNGIGHGTASSSSHPNYHPVEVSKRPPGPRMPD 397
Query: 536 GAR 544
G R
Sbjct: 398 GTR 400
>At2g33240.1 68415.m04072 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin my5A
(SP:Q02440) {Gallus gallus}
Length = 1770
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +3
Query: 333 CVSVNDPYVMAAWGAXHNTKGKVRMLADPSGNFIKALDLGTNL-PPLGGFRSKRFSMVIV 509
C + +V ++W NT+ + +L + I DL TNL P L + R +
Sbjct: 1636 CSQATEDFVGSSWDELKNTRQALVLLVTEQKSTITYDDLTTNLCPALSTQQLYRICTLCK 1695
Query: 510 DSXVQDLNVEPD 545
+D NV PD
Sbjct: 1696 IDDHEDQNVSPD 1707
>At1g18740.1 68414.m02337 expressed protein
Length = 382
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -3
Query: 583 LXLSAREQDRPVPSGSTFRSWTLLSTMTIENLLERKPPSGGRLVPRSRA 437
+ +SA + RP+ G R+ L + I L E+ PSG L R+R+
Sbjct: 138 IVISALDSHRPIGEGQLRRAKKALIDLAIGMLDEKDHPSGTNLAHRNRS 186
>At5g52440.1 68418.m06507 HCF106 protein identical to HCF106
[Arabidopsis thaliana] GI:4894914; contains Pfam profile
PF02416: mttA/Hcf106 family
Length = 260
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 418 PAATSSRLWTWAPICRRSEVSAPKGSRWSSLTAXSK 525
P T S L+++ P+ R + S P S W SL S+
Sbjct: 15 PTITKSHLFSYPPLQSRYKASKPNLSSWFSLLGSSR 50
>At3g02890.1 68416.m00284 PHD finger protein-related contains low
similarity to PHD-finger domain proteins
Length = 963
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = -3
Query: 301 LSAFCTYPGKCVLEHPGVKAPGTANNTT 218
L++ C++ G +L GV APG+++NT+
Sbjct: 48 LASQCSFNGDNLLRSSGVNAPGSSHNTS 75
>At2g06420.1 68415.m00711 expressed protein
Length = 249
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 102 ISQLSMAPIKVGDQLPAADLFEDSPASKVNIC 197
+S + +APIK GD+ P D F S + C
Sbjct: 161 LSNIIIAPIKTGDKAPQVDEFCLKAVSDLTFC 192
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,111,900
Number of Sequences: 28952
Number of extensions: 311234
Number of successful extensions: 816
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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