BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P02_F_P11 (651 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 33 0.027 SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 32 0.062 SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 31 0.11 SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protei... 30 0.25 SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 30 0.33 SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 30 0.33 SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 29 0.44 SPCC285.17 |spp27|uaf30|RNA polymerase I upstream activation fac... 29 0.58 SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 29 0.58 SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 27 2.3 SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.3 SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 27 2.3 SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 27 2.3 SPBC354.15 |fap1||L-pipecolate oxidase|Schizosaccharomyces pombe... 27 3.1 SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 4.1 SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomy... 26 4.1 SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosacc... 26 4.1 SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyc... 26 4.1 SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos... 26 5.4 SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual 26 5.4 SPBC1604.01 |mug158|SPBC1677.01c|sulfatase modifying factor 1 re... 26 5.4 SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr... 26 5.4 SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 7.2 SPCC576.17c |||membrane transporter|Schizosaccharomyces pombe|ch... 25 7.2 SPBC947.07 |||ribosome biogenesis protein Rrp14-C|Schizosaccharo... 25 7.2 SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1... 25 7.2 SPBC1773.10c |||asparagine-tRNA ligase Ded81 |Schizosaccharomyce... 25 7.2 SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain protein|Schizosacchar... 25 9.5 SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomy... 25 9.5 SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 25 9.5 SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 25 9.5 >SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||Manual Length = 500 Score = 33.5 bits (73), Expect = 0.027 Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 2/80 (2%) Frame = +2 Query: 113 ATMADAAVDKKEVAPEEVTSTEPKESPVK--KSPAKKVEAAESNGKENGTDEAPEDSPAE 286 ++ D + K + + +S EP + VK K KK E++ + E+ + E+ S Sbjct: 44 SSKTDVSPKKSKKEAKRASSPEPSKKSVKKQKKSKKKEESSSESESESSSSESESSSSES 103 Query: 287 NGDAEESNDASXNGDATEKK 346 + ES +S ++E + Sbjct: 104 ESSSSESESSSSESSSSESE 123 Score = 29.9 bits (64), Expect = 0.33 Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = +2 Query: 137 DKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESND- 313 +KKE + + + + ES + S ++ E E K T+E E S + D+E S+D Sbjct: 158 EKKESSSDSSSESSSSESESESSSSESEEEEEVVEK---TEEKKEGSSESSSDSESSSDS 214 Query: 314 ASXNGDA 334 +S +GD+ Sbjct: 215 SSESGDS 221 Score = 27.5 bits (58), Expect = 1.8 Identities = 14/61 (22%), Positives = 31/61 (50%) Frame = +2 Query: 122 ADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAE 301 ++++ + E E V TE K+ +S + E++ + E+G ++ DS +E+ + Sbjct: 177 SESSSSESEEEEEVVEKTEEKKEGSSESSSDS-ESSSDSSSESGDSDSSSDSESESSSED 235 Query: 302 E 304 E Sbjct: 236 E 236 >SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosaccharomyces pombe|chr 1|||Manual Length = 601 Score = 32.3 bits (70), Expect = 0.062 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Frame = +2 Query: 140 KKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSP-AENGDAEE 304 K+E P E + +P SPV S K E +E K +DEAP+ +P AE+ EE Sbjct: 485 KREKTPVEKSFPKPASSPVTFSEDVKKEPSEEK-KLEVSDEAPKAAPLAESKKVEE 539 Score = 27.5 bits (58), Expect = 1.8 Identities = 13/51 (25%), Positives = 25/51 (49%) Frame = +2 Query: 155 PEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEES 307 PE ++PKES ++ P+K+ E + + +E + +N EE+ Sbjct: 430 PEAQPVSKPKESAEEQKPSKEPEVKPTTPSASKVEEPSKKRDEDNHQKEET 480 >SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr 3|||Manual Length = 867 Score = 31.5 bits (68), Expect = 0.11 Identities = 15/49 (30%), Positives = 23/49 (46%) Frame = +2 Query: 188 SPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASXNGDA 334 +P+K+ PAK ++ + A SPA NG N+AS + A Sbjct: 113 TPLKRGPAKGFNRNADEKQKRASGSAKSSSPAVNGSVFSGNEASPSSRA 161 >SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protein Tgc1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 348 Score = 30.3 bits (65), Expect = 0.25 Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Frame = +2 Query: 182 KESPVKKSPAK-KVEAAESNGKENGTDEAPEDSPAENGDAEESNDASXNGDATEKKXTGV 358 K PV++ P K + ++ NG+E T + E++ + G ++E N+A+ + + GV Sbjct: 123 KARPVQEQPIKDRKKSKNKNGEEPETSTSVENAESAKGSSDE-NEANTATAPSSNEANGV 181 Query: 359 KRK 367 +K Sbjct: 182 DKK 184 >SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccharomyces pombe|chr 2|||Manual Length = 1102 Score = 29.9 bits (64), Expect = 0.33 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Frame = +2 Query: 143 KEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEN-GDAEESNDAS 319 ++V ++TS EPK + KSP +K + ++ T++ DS +N ++S DA Sbjct: 973 EQVDSAQLTS-EPKSESLPKSPEEKSDDTSNDVTTENTNDINGDSNMDNVATVDKSTDAV 1031 Query: 320 XNGDAT 337 AT Sbjct: 1032 DTSTAT 1037 >SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 764 Score = 29.9 bits (64), Expect = 0.33 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = +2 Query: 221 EAAESNGKENGTDEAPEDSPAENGDAEESNDASXNGD 331 E++E + ++N TDEA ED+ + D + S + D Sbjct: 355 ESSEDDDEDNNTDEANEDAQSNVSDESPKGEGSSHSD 391 >SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schizosaccharomyces pombe|chr 2|||Manual Length = 451 Score = 29.5 bits (63), Expect = 0.44 Identities = 13/60 (21%), Positives = 34/60 (56%) Frame = +2 Query: 158 EEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASXNGDAT 337 E +S+E +S S ++ +++ + + + ++ +DS +++ D+ ES +S + D+T Sbjct: 244 ESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDS-ESESSSEDSDST 302 Score = 29.1 bits (62), Expect = 0.58 Identities = 13/60 (21%), Positives = 27/60 (45%) Frame = +2 Query: 167 TSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASXNGDATEKK 346 + +E + S + +ES G+D + S +E+ + E ND+S + +E + Sbjct: 133 SDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESE 192 Score = 29.1 bits (62), Expect = 0.58 Identities = 13/60 (21%), Positives = 27/60 (45%) Frame = +2 Query: 167 TSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASXNGDATEKK 346 + +E + S + +ES G+D + S +E+ + E ND+S + +E + Sbjct: 187 SDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESE 246 >SPCC285.17 |spp27|uaf30|RNA polymerase I upstream activation factor complex subunit Spp27|Schizosaccharomyces pombe|chr 3|||Manual Length = 233 Score = 29.1 bits (62), Expect = 0.58 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%) Frame = +2 Query: 158 EEVTSTEPKESPVKKSPAKKVEA--AESNGKENGTDEAPEDSPAENGDAEESNDASXNGD 331 +E + KES K++PA+K + A NG E G A + D EE N D Sbjct: 53 DETAAPSEKESLEKQAPARKTKGKRATENGTEEGKKPAKRTRKRKE-DGEEGGKRKRNQD 111 >SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosaccharomyces pombe|chr 3|||Manual Length = 822 Score = 29.1 bits (62), Expect = 0.58 Identities = 17/53 (32%), Positives = 29/53 (54%) Frame = +2 Query: 146 EVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEE 304 ++ PE+ + + PVKK P+KK + A++N E DE + E D+E+ Sbjct: 58 DLKPED-DEVDEEVVPVKKKPSKKSKKAKANAFEAFADEQSVEEEEEE-DSEK 108 >SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF3c|Schizosaccharomyces pombe|chr 1|||Manual Length = 918 Score = 27.1 bits (57), Expect = 2.3 Identities = 16/60 (26%), Positives = 33/60 (55%) Frame = +2 Query: 164 VTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASXNGDATEK 343 V ++E ES + S ++ E ES +DE+ +S +E+ ++EE +++ D +E+ Sbjct: 75 VAASEDSESDSESS--EEEEETESEEDSEVSDESESESESES-ESEEESESEEESDESER 131 >SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 2685 Score = 27.1 bits (57), Expect = 2.3 Identities = 16/55 (29%), Positives = 27/55 (49%) Frame = +2 Query: 200 KSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASXNGDATEKKXTGVKR 364 K P+ K + S+ +NG+D DS + N SN + N +A ++K + R Sbjct: 963 KDPSPKSASESSSFYQNGSDIDDNDSNSSN----TSNHTTENANAQQRKLEDLNR 1013 >SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|chr 2|||Manual Length = 867 Score = 27.1 bits (57), Expect = 2.3 Identities = 11/50 (22%), Positives = 24/50 (48%) Frame = +2 Query: 164 VTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESND 313 + +EP + K+ K + +E+ + G D+ E+ ++ D +E D Sbjct: 169 IQPSEPHDVDTSKNGLSKKQHSEAQPEVQGNDDEVEEEDDDDDDEDEDED 218 >SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces pombe|chr 2|||Manual Length = 275 Score = 27.1 bits (57), Expect = 2.3 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 5/52 (9%) Frame = +2 Query: 170 STEPKESPVKKSPAKKVE-----AAESNGKENGTDEAPEDSPAENGDAEESN 310 S P++SPV+ V+ +ESN K +GT+ + +P NG+ E +N Sbjct: 175 SFAPQKSPVENETETNVDNGDTKISESNEK-SGTEVEQQSAPNSNGNEEVNN 225 >SPBC354.15 |fap1||L-pipecolate oxidase|Schizosaccharomyces pombe|chr 2|||Manual Length = 412 Score = 26.6 bits (56), Expect = 3.1 Identities = 13/36 (36%), Positives = 18/36 (50%) Frame = -1 Query: 606 RAQPFIV*GYQYGCNTFVGAXYVDVS*TLMGIDALQ 499 RA P ++ G N + + Y D MGIDAL+ Sbjct: 36 RAPPPVIDGSSVDANRIIRSDYADAVYCSMGIDALE 71 >SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual Length = 615 Score = 26.2 bits (55), Expect = 4.1 Identities = 15/56 (26%), Positives = 26/56 (46%) Frame = +2 Query: 161 EVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASXNG 328 EV++ EP+ PVK+ V ++ G+ + TD +P E + S + G Sbjct: 389 EVSANEPQPRPVKED----VPKSQVGGETDTTDVINNSTPKEETEESPSTELPETG 440 >SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomyces pombe|chr 2|||Manual Length = 542 Score = 26.2 bits (55), Expect = 4.1 Identities = 16/54 (29%), Positives = 25/54 (46%) Frame = +2 Query: 149 VAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESN 310 VAP +TS + V KS VE+ +++ T PED P+ ++N Sbjct: 288 VAPSFITSDQAATPDVLKSEEAHVESFSKESEKDQT-PIPEDVPSPMDTLSQAN 340 >SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosaccharomyces pombe|chr 1|||Manual Length = 295 Score = 26.2 bits (55), Expect = 4.1 Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 4/65 (6%) Frame = +2 Query: 128 AAVDKKEVAPEEVTSTEPKESPV----KKSPAKKVEAAESNGKENGTDEAPEDSPAENGD 295 A VD++E+ EE + PV K S +K S K + EDS GD Sbjct: 75 AQVDEEELEEEEEEEEDATPEPVVTSKKNSRSKPKNGGASKRKASRRTVVDEDSENLEGD 134 Query: 296 AEESN 310 E+ + Sbjct: 135 EEDGS 139 >SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyces pombe|chr 2|||Manual Length = 1428 Score = 26.2 bits (55), Expect = 4.1 Identities = 13/39 (33%), Positives = 23/39 (58%) Frame = +2 Query: 218 VEAAESNGKENGTDEAPEDSPAENGDAEESNDASXNGDA 334 VE + NG + + ++ +DS ++ + ESND S + DA Sbjct: 372 VEEIKKNGIQEDS-QSTDDSSKDDDNNSESNDMSPHNDA 409 >SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizosaccharomyces pombe|chr 2|||Manual Length = 642 Score = 25.8 bits (54), Expect = 5.4 Identities = 12/51 (23%), Positives = 22/51 (43%) Frame = +2 Query: 164 VTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDA 316 + ++ K SPV + A +N + + +SP + EE+N A Sbjct: 527 LANSNSKSSPVAVQRVSTLPQASANKQAKEMESKMSNSPTQKSKTEENNQA 577 >SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual Length = 408 Score = 25.8 bits (54), Expect = 5.4 Identities = 21/73 (28%), Positives = 30/73 (41%) Frame = +2 Query: 152 APEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESNDASXNGD 331 A EE + SP + S K + E + ENG + +N D E DA NG Sbjct: 144 ADEEGSEISVPSSPKRMSFNLKEDMEEGDFDENG------NFIRKNYDPESQYDAWLNGS 197 Query: 332 ATEKKXTGVKRKS 370 + KK R++ Sbjct: 198 VSNKKSIAAAREA 210 >SPBC1604.01 |mug158|SPBC1677.01c|sulfatase modifying factor 1 related|Schizosaccharomyces pombe|chr 2|||Manual Length = 773 Score = 25.8 bits (54), Expect = 5.4 Identities = 11/34 (32%), Positives = 18/34 (52%) Frame = -3 Query: 634 YKXNLNQTQKSSTLHSMRLSVWV*YICRSGICGC 533 Y +LN+ + L +R + ++ SGICGC Sbjct: 109 YALDLNEAELQKGLQELRQTTNYQHVKVSGICGC 142 >SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr 1|||Manual Length = 872 Score = 25.8 bits (54), Expect = 5.4 Identities = 14/48 (29%), Positives = 25/48 (52%) Frame = +2 Query: 131 AVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPED 274 ++D+ +P ++S K SP K+ +K ++A + TDE P D Sbjct: 592 SLDENVNSPTSISSPSSKSSPFTKTTSKDTKSATT------TDERPSD 633 >SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual Length = 4717 Score = 25.4 bits (53), Expect = 7.2 Identities = 14/43 (32%), Positives = 19/43 (44%) Frame = +2 Query: 182 KESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESN 310 +E +S + EA E NG + S EN D+EE N Sbjct: 3939 EEDTANQSDLDESEARELESDMNGVTKDSVVSENENSDSEEEN 3981 >SPCC576.17c |||membrane transporter|Schizosaccharomyces pombe|chr 3|||Manual Length = 525 Score = 25.4 bits (53), Expect = 7.2 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = -3 Query: 367 FPLHTSXFLFCGITVXRCIVAFFGITIFS 281 FP+ F FC IV+ G+TIF+ Sbjct: 398 FPIGIFMFAFCSKVHIHYIVSLIGLTIFN 426 >SPBC947.07 |||ribosome biogenesis protein Rrp14-C|Schizosaccharomyces pombe|chr 2|||Manual Length = 233 Score = 25.4 bits (53), Expect = 7.2 Identities = 13/44 (29%), Positives = 21/44 (47%) Frame = +2 Query: 182 KESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAENGDAEESND 313 KE ++ AKK+ ES K+ A + + + A+E ND Sbjct: 41 KEKAKARAEAKKLAKKESKAKQESKVAAYDTGNSSDNIADEEND 84 >SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1023 Score = 25.4 bits (53), Expect = 7.2 Identities = 13/38 (34%), Positives = 18/38 (47%) Frame = +2 Query: 176 EPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEN 289 E +ESP+K P KK + E T + SP E+ Sbjct: 892 ETRESPMKNKPTKKQHKRAFSMFERPTSQKAPLSPVES 929 >SPBC1773.10c |||asparagine-tRNA ligase Ded81 |Schizosaccharomyces pombe|chr 2|||Manual Length = 568 Score = 25.4 bits (53), Expect = 7.2 Identities = 16/53 (30%), Positives = 28/53 (52%) Frame = +2 Query: 125 DAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPA 283 + A KK A E + + + K++ AK++EAA+ N + P+D+PA Sbjct: 80 EQAAKKKAKAAEAEAAAAARAAAAKEAEAKRLEAAK-----NIVLKEPKDAPA 127 >SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 682 Score = 25.0 bits (52), Expect = 9.5 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%) Frame = -3 Query: 316 CIVAFF-GITIFSRRIFWGFIGTILFA 239 C+ FF G TI+ +F G +GT L A Sbjct: 368 CMRNFFPGFTIYFPALFLGVVGTFLIA 394 >SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomyces pombe|chr 1|||Manual Length = 278 Score = 25.0 bits (52), Expect = 9.5 Identities = 12/44 (27%), Positives = 23/44 (52%) Frame = +2 Query: 113 ATMADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGK 244 A A A + + +V+ + + +PK++PV S A + S+ K Sbjct: 210 AESAAAVIKEDKVSDRKKSKKKPKKTPVSNSTASQASENASDKK 253 >SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizosaccharomyces pombe|chr 2|||Manual Length = 1513 Score = 25.0 bits (52), Expect = 9.5 Identities = 12/57 (21%), Positives = 30/57 (52%) Frame = +2 Query: 119 MADAAVDKKEVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEDSPAEN 289 +A+ + +AP + ++ + + VK A+ +E + K+NGT+ + ++ E+ Sbjct: 1273 VAEGLLPASAIAPPKSSNEKKSSNNVKAVEAETKSKSEKSPKKNGTNISDANNKNES 1329 >SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 516 Score = 25.0 bits (52), Expect = 9.5 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = +2 Query: 269 EDSPAE-NGDAEESNDASXNGDATEKKXTGVKRKSVALD 382 ED+ A+ E+SN A+ NG+ T GV + S +D Sbjct: 41 EDARADLQSSMEDSNKANGNGEETTDGAEGVLQTSEEVD 79 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,053,949 Number of Sequences: 5004 Number of extensions: 34361 Number of successful extensions: 207 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 189 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 206 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 293780908 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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