BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P02_F_P10 (652 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 09_02_0366 + 7941550-7942161,7942230-7942775 29 3.2 09_04_0564 + 18565583-18566449,18569662-18570123 28 7.4 08_02_1172 + 24898290-24899141,24900864-24901328 28 7.4 06_03_0743 + 24069752-24070483,24071890-24072345 28 7.4 07_03_1168 + 24483490-24483553,24483874-24484328 27 9.8 >09_02_0366 + 7941550-7942161,7942230-7942775 Length = 385 Score = 29.1 bits (62), Expect = 3.2 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +2 Query: 410 CQCPAHGYRGNIQVSNATPLKDY 478 C C A G R N++ A PLKD+ Sbjct: 241 CYCCAEGCRNNVEHPRARPLKDF 263 >09_04_0564 + 18565583-18566449,18569662-18570123 Length = 442 Score = 27.9 bits (59), Expect = 7.4 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = +2 Query: 410 CQCPAHGYRGNIQVSNATPLKDY 478 C C A G R NI A PLKD+ Sbjct: 319 CYCCAAGCRNNIDHPRAKPLKDF 341 >08_02_1172 + 24898290-24899141,24900864-24901328 Length = 438 Score = 27.9 bits (59), Expect = 7.4 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = +2 Query: 410 CQCPAHGYRGNIQVSNATPLKDY 478 C C A G R NI A PLKD+ Sbjct: 314 CYCCAAGCRNNIDHPRARPLKDF 336 >06_03_0743 + 24069752-24070483,24071890-24072345 Length = 395 Score = 27.9 bits (59), Expect = 7.4 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = +2 Query: 410 CQCPAHGYRGNIQVSNATPLKDY 478 C C A G R NI A PLKD+ Sbjct: 274 CYCCAAGCRNNIDHPRARPLKDF 296 >07_03_1168 + 24483490-24483553,24483874-24484328 Length = 172 Score = 27.5 bits (58), Expect = 9.8 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 4/53 (7%) Frame = +1 Query: 331 LGSKDVKYNDIXKTNFRFIANDK----YCILPMSCARLQRKYSSFKCNTIKRL 477 LGS D+ + T A + + + P +CA+L K + F C +RL Sbjct: 68 LGSDDIVVLSVYTTTKMVFAYGREGFSHAVAPTACAKLSAKIAIFACGPYRRL 120 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,409,787 Number of Sequences: 37544 Number of extensions: 215848 Number of successful extensions: 445 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 435 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 445 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1620349964 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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