Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_P10
         (652 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0366 + 7941550-7942161,7942230-7942775                           29   3.2  
09_04_0564 + 18565583-18566449,18569662-18570123                       28   7.4  
08_02_1172 + 24898290-24899141,24900864-24901328                       28   7.4  
06_03_0743 + 24069752-24070483,24071890-24072345                       28   7.4  
07_03_1168 + 24483490-24483553,24483874-24484328                       27   9.8  

>09_02_0366 + 7941550-7942161,7942230-7942775
          Length = 385

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 410 CQCPAHGYRGNIQVSNATPLKDY 478
           C C A G R N++   A PLKD+
Sbjct: 241 CYCCAEGCRNNVEHPRARPLKDF 263


>09_04_0564 + 18565583-18566449,18569662-18570123
          Length = 442

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +2

Query: 410 CQCPAHGYRGNIQVSNATPLKDY 478
           C C A G R NI    A PLKD+
Sbjct: 319 CYCCAAGCRNNIDHPRAKPLKDF 341


>08_02_1172 + 24898290-24899141,24900864-24901328
          Length = 438

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +2

Query: 410 CQCPAHGYRGNIQVSNATPLKDY 478
           C C A G R NI    A PLKD+
Sbjct: 314 CYCCAAGCRNNIDHPRARPLKDF 336


>06_03_0743 + 24069752-24070483,24071890-24072345
          Length = 395

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +2

Query: 410 CQCPAHGYRGNIQVSNATPLKDY 478
           C C A G R NI    A PLKD+
Sbjct: 274 CYCCAAGCRNNIDHPRARPLKDF 296


>07_03_1168 + 24483490-24483553,24483874-24484328
          Length = 172

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
 Frame = +1

Query: 331 LGSKDVKYNDIXKTNFRFIANDK----YCILPMSCARLQRKYSSFKCNTIKRL 477
           LGS D+    +  T     A  +    + + P +CA+L  K + F C   +RL
Sbjct: 68  LGSDDIVVLSVYTTTKMVFAYGREGFSHAVAPTACAKLSAKIAIFACGPYRRL 120


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,409,787
Number of Sequences: 37544
Number of extensions: 215848
Number of successful extensions: 445
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 445
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)