BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P02_F_P10 (652 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL032639-7|CAA21631.2| 465|Caenorhabditis elegans Hypothetical ... 52 5e-07 U10401-7|AAA19056.1| 504|Caenorhabditis elegans Hypothetical pr... 28 6.6 U97014-1|AAB52425.1| 893|Caenorhabditis elegans Hypothetical pr... 27 8.7 >AL032639-7|CAA21631.2| 465|Caenorhabditis elegans Hypothetical protein Y38F1A.6 protein. Length = 465 Score = 51.6 bits (118), Expect = 5e-07 Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 4/74 (5%) Frame = +2 Query: 407 SCQCPAHGYRGN----IQVSNATPLKDYAFEIKCSTVRYGLXVTREVXQDLXNLNAKNVC 574 SC CP H N ++ DYAFE+ CST+R+G VT E+ D+ NL AK Sbjct: 16 SC-CPHHAPATNPFKLAKLHGNNKSTDYAFEMVCSTLRFGKGVTLEIGYDVRNLGAKKTL 74 Query: 575 VMTDPNVASLSPMK 616 ++TD NV + K Sbjct: 75 LITDKNVQNTIAFK 88 >U10401-7|AAA19056.1| 504|Caenorhabditis elegans Hypothetical protein T20B12.3 protein. Length = 504 Score = 27.9 bits (59), Expect = 6.6 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = -1 Query: 121 EHHTNSISKIKIMLQVCTYPRINNKYYKTLLFIRR 17 E + S+++ LQ C YP KY+KT+ F + Sbjct: 42 EPKSKSVAEFTKFLQECEYPDDIIKYFKTIKFFEK 76 >U97014-1|AAB52425.1| 893|Caenorhabditis elegans Hypothetical protein T05E8.1 protein. Length = 893 Score = 27.5 bits (58), Expect = 8.7 Identities = 23/76 (30%), Positives = 36/76 (47%) Frame = -1 Query: 289 SSQLISLRYRTLFKNRYSIDK*LKCFQHFCNASVHNKINYQNMISVIPWMFFLN*FEHHT 110 ++Q++ L Y + + SI K LK + FC+ S+ NKI+ Q + M + F + Sbjct: 386 NAQIMHLDYSQIMEAE-SICKNLKWYNCFCSMSLVNKIDPQFASDPVCIMMSIGSFGSTS 444 Query: 109 NSISKIKIMLQVCTYP 62 N K V TYP Sbjct: 445 NEDKKCN-SSTVPTYP 459 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,838,412 Number of Sequences: 27780 Number of extensions: 235893 Number of successful extensions: 480 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 466 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 480 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1444744186 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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