Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_P10
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   1.9  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   1.9  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   3.4  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   4.5  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -1

Query: 256 LFKNRYSIDK*LKCFQHFCNASVHNKINYQNMIS-VIPWMFFL 131
           +FKN   I++    FQ+     V+N   YQ M++ V+   FF+
Sbjct: 415 IFKNMSQIEREAITFQYTDWEEVYNGYIYQKMVADVVGDYFFI 457


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -1

Query: 256 LFKNRYSIDK*LKCFQHFCNASVHNKINYQNMIS-VIPWMFFL 131
           +FKN   I++    FQ+     V+N   YQ M++ V+   FF+
Sbjct: 415 IFKNMSQIEREAITFQYTDWEEVYNGYIYQKMVADVVGDYFFI 457


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 444 IFPL*PCAGHWQD 406
           + P  P +GHWQD
Sbjct: 231 VLPNFPSSGHWQD 243


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +3

Query: 189 TEALQKCWKHFNYLSILYL 245
           T+   +  KHFNY+ ++++
Sbjct: 155 TDVWVELLKHFNYMKVIFI 173


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,888
Number of Sequences: 438
Number of extensions: 3217
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)