BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P02_F_P08 (651 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_03_0153 - 15776359-15776516,15776742-15776821,15776912-157769... 71 1e-12 04_04_0043 - 22330282-22330410,22330484-22330568,22330602-223307... 50 1e-06 04_03_0471 - 16292916-16293209,16294558-16294803,16297557-162976... 27 9.8 >02_03_0153 - 15776359-15776516,15776742-15776821,15776912-15776983, 15777070-15777110,15777201-15777257,15777344-15777400, 15778441-15778517,15778652-15778760 Length = 216 Score = 70.5 bits (165), Expect = 1e-12 Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 2/107 (1%) Frame = +3 Query: 327 MWVFGYGSLIWKADFKYETKLVXYILXYKRRFYQHSVDHRGVPEKPGXVXTLIPSKFPNS 506 +WVFGYGSLIW F ++ K++ ++ YKR F +DHRG PE P TL + + Sbjct: 3 LWVFGYGSLIWNPGFDFDEKILGFVKGYKRTFNLACIDHRGTPEHPARTCTLESDE--EA 60 Query: 507 TVWGVAYRITA--QXIHEVTKHLHFTXKNGYSKKTVTFHPNNSEYLP 641 WG+AY + + E K+L K +V F+ P Sbjct: 61 ICWGIAYCVKGGLKKEQEAMKYLERRECEYDQKISVDFYKEGDSLKP 107 >04_04_0043 - 22330282-22330410,22330484-22330568,22330602-22330724, 22330839-22330879,22331081-22331137,22331530-22331583, 22331646-22331650,22332392-22332500 Length = 200 Score = 50.4 bits (115), Expect = 1e-06 Identities = 18/34 (52%), Positives = 25/34 (73%) Frame = +3 Query: 327 MWVFGYGSLIWKADFKYETKLVXYILXYKRRFYQ 428 MWVFGYGSL+W F ++ +LV ++ Y+R FYQ Sbjct: 3 MWVFGYGSLVWNPGFAHDARLVGFVRDYRRVFYQ 36 >04_03_0471 - 16292916-16293209,16294558-16294803,16297557-16297692, 16297765-16297983,16298194-16298572,16298967-16299225, 16300044-16300114,16300604-16300625 Length = 541 Score = 27.5 bits (58), Expect = 9.8 Identities = 17/62 (27%), Positives = 29/62 (46%) Frame = -3 Query: 244 KILSIFV*SITTINHYLIKLHKVYXLXMLVLPSCLDFTIALLFFYKNKYSIFVLILQIFE 65 K+ S+ TIN +LHK V+ + ++L+FFY N+ ++ L + E Sbjct: 473 KLTSLIEHEYRTINQARFELHKSLPAAQRVVILAV---VSLMFFYDNRKDVYTLCSDLRE 529 Query: 64 WI 59 I Sbjct: 530 TI 531 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,929,850 Number of Sequences: 37544 Number of extensions: 263848 Number of successful extensions: 376 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 366 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 376 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1620349964 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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