Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_P08
         (651 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g44790.1 68414.m05131 ChaC-like family protein contains Pfam ...    77   1e-14
At5g26220.1 68418.m03121 ChaC-like family protein contains Pfam ...    73   2e-13
At4g31290.1 68417.m04440 ChaC-like family protein contains Pfam ...    71   9e-13
At1g78530.1 68414.m09153 protein kinase family protein contains ...    29   3.5  

>At1g44790.1 68414.m05131 ChaC-like family protein contains Pfam
           profile: PF04752 ChaC-like protein
          Length = 199

 Score = 76.6 bits (180), Expect = 1e-14
 Identities = 41/106 (38%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
 Frame = +3

Query: 327 MWVFGYGSLIWKADFKYETKLVXYILXYKRRFYQHSVDHRGVPEKPGXVXTLIPSKFPNS 506
           MWVFGYGSLIWK  F ++  L  +I  Y+R F+Q S DHRG P+ PG   TL  +     
Sbjct: 3   MWVFGYGSLIWKTGFPFDESLPGFIKGYRRVFHQGSTDHRGTPDFPGRTVTLEAAH--EE 60

Query: 507 TVWGVAYRIT-AQXIHEVTKHLHFTXKNGYSKKTVTFHPNNSEYLP 641
              GVAY+IT  +   +   HL    K    K+ + F  +++   P
Sbjct: 61  VCCGVAYKITKEEDKRDALLHLEVREKQYDQKEYLDFFTDSNASEP 106


>At5g26220.1 68418.m03121 ChaC-like family protein contains Pfam
           profile: PF04752 ChaC-like protein
          Length = 216

 Score = 72.9 bits (171), Expect = 2e-13
 Identities = 41/107 (38%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
 Frame = +3

Query: 327 MWVFGYGSLIWKADFKYETKLVXYILXYKRRFYQHSVDHRGVPEKPGXVXTLIPSKFPNS 506
           +WVFGYGSLIW   F ++ KL+ YI  YKR F    +DHRG PE P    TL  S    +
Sbjct: 3   LWVFGYGSLIWNPGFDFDEKLIGYIKDYKRVFDLACIDHRGTPEHPARTCTLEQS--TGA 60

Query: 507 TVWGVAYRITAQXIHE--VTKHLHFTXKNGYSKKTVTFHPNNSEYLP 641
             WG AY +      E    ++L        SK  V F+  N    P
Sbjct: 61  ICWGAAYCVRGGPEKEKLAMEYLERRECEYDSKTLVEFYTENDTSTP 107


>At4g31290.1 68417.m04440 ChaC-like family protein contains Pfam
           profile: PF04752 ChaC-like protein
          Length = 227

 Score = 70.5 bits (165), Expect = 9e-13
 Identities = 31/67 (46%), Positives = 39/67 (58%)
 Frame = +3

Query: 327 MWVFGYGSLIWKADFKYETKLVXYILXYKRRFYQHSVDHRGVPEKPGXVXTLIPSKFPNS 506
           MWVFGYGSL+W   F Y+ K++ +I  YKR F    +DHRG PE P    TL   K   +
Sbjct: 3   MWVFGYGSLVWNPGFHYDEKVLGFIKGYKRVFDLACIDHRGTPEHPARTCTL--EKAEEA 60

Query: 507 TVWGVAY 527
             WG A+
Sbjct: 61  ICWGTAF 67


>At1g78530.1 68414.m09153 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 355

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +3

Query: 384 KLVXYILXYKRRFYQHSVDHRGVPEKPGXVXTLIPSKFPNS 506
           K+V  +L YKR   +H++   G P K G    +  S+  NS
Sbjct: 22  KIVIALLFYKRWKRKHTIHENGFPVKGGGKMVMFRSQLLNS 62


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,961,808
Number of Sequences: 28952
Number of extensions: 241846
Number of successful extensions: 376
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 376
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)