Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_P07
(653 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0763 - 24405525-24405701,24406209-24406368,24406924-244070... 152 3e-37
02_01_0219 - 1437685-1437723,1437932-1438091,1438385-1438514,143... 79 3e-15
01_06_0553 + 30173964-30174349,30175124-30175439,30175523-301756... 36 0.028
12_02_0699 + 22245933-22246213,22246493-22246575,22246844-222471... 32 0.46
02_02_0467 - 10620976-10621299 31 1.1
07_03_0352 + 17089666-17089982,17090326-17090410,17090674-17090913 29 4.3
02_05_0511 + 29644266-29644399,29644502-29644913,29645007-296450... 29 4.3
06_03_0099 + 16633928-16638213,16638299-16638386,16638823-166389... 28 5.6
02_05_0181 - 26522849-26522932,26523053-26523184,26523263-265233... 28 5.6
01_06_0474 + 29604201-29604527,29604634-29604988,29605071-296054... 28 7.5
>06_03_0763 -
24405525-24405701,24406209-24406368,24406924-24407005,
24407098-24407167,24407443-24407607,24407731-24407874,
24408467-24408715,24409006-24409221,24409306-24409398
Length = 451
Score = 152 bits (368), Expect = 3e-37
Identities = 71/142 (50%), Positives = 103/142 (72%)
Frame = +2
Query: 227 RMPNIKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIXXSVRGEDVYIVQSG 406
R +K+FSG+++ LAQ+I LG+DLGKV+ K+F++ E V++ SVRG DV++VQ
Sbjct: 86 RDSRLKIFSGTANRPLAQEIASYLGVDLGKVLIKRFADGEIYVQLQESVRGCDVFLVQPT 145
Query: 407 SGEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKXKSRAPITAKLVANILSVS 586
+N+NLMEL +MI+AC+ ASA +T VIP F YAR D+K + R ITAKL AN+L+ +
Sbjct: 146 CSPVNENLMELFVMIDACRRASARSITVVIPYFGYARADRKAQGREAITAKLSANLLTEA 205
Query: 587 GADHIITMDLHASQIQGFFDIP 652
G+D +I D+H++Q G+FDIP
Sbjct: 206 GSDRVIVCDIHSTQALGYFDIP 227
>02_01_0219 -
1437685-1437723,1437932-1438091,1438385-1438514,
1438627-1438696,1439264-1439407,1439771-1439837,
1439970-1440019,1440386-1440559,1440881-1440934,
1441008-1441112
Length = 330
Score = 79.0 bits (186), Expect = 3e-15
Identities = 41/82 (50%), Positives = 54/82 (65%)
Frame = +2
Query: 407 SGEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKXKSRAPITAKLVANILSVS 586
S EI L L IN + ASA +TAVIP F YAR D+K + R I AKLVAN+++ +
Sbjct: 110 SQEIASYLGLELGKINIKRRASAKNITAVIPYFGYARADRKSQGRESIAAKLVANMITEA 169
Query: 587 GADHIITMDLHASQIQGFFDIP 652
GA+ ++ DLH+SQ G+FDIP
Sbjct: 170 GANRVLVCDLHSSQAMGYFDIP 191
Score = 36.7 bits (81), Expect = 0.016
Identities = 13/31 (41%), Positives = 25/31 (80%)
Frame = +2
Query: 239 IKVFSGSSHPDLAQKIVDRLGIDLGKVVTKK 331
+++FSG+++P L+Q+I LG++LGK+ K+
Sbjct: 98 LRIFSGTANPSLSQEIASYLGLELGKINIKR 128
>01_06_0553 +
30173964-30174349,30175124-30175439,30175523-30175618,
30175710-30175778,30175878-30176006,30176165-30176264,
30177321-30177454
Length = 409
Score = 35.9 bits (79), Expect = 0.028
Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Frame = +2
Query: 236 NIKVFSGSSHPDLAQKIVDRLG-IDLGKVVTKKFSN--METCVEIXXSVRGEDVYIVQSG 406
N+ +F +LA+++V R I+L + + F++ + ++RG+ V + S
Sbjct: 98 NVLLFHCEEMRELAEQVVARNDDIELRSISWRTFADGFPNLFISNAHTIRGQHVAFLASF 157
Query: 407 SGEINDNLMELLIMINACKIASASRVTAVIPCFPYA----RQDKKXKSRAPITAKLVANI 574
S + E L +I A S T ++P FP +D+ + A A++++NI
Sbjct: 158 SSP--SVIFEQLSIIYALPKLFISSFTLILPFFPTGTSERMEDEGDVATAFTLARILSNI 215
Query: 575 -LSVSGADHIITMDLHASQIQGFF 643
+S G ++ D+HA Q + +F
Sbjct: 216 PISRGGPSSLVIFDIHALQERFYF 239
>12_02_0699 +
22245933-22246213,22246493-22246575,22246844-22247125,
22248725-22248986,22250146-22251781,22251910-22252416
Length = 1016
Score = 31.9 bits (69), Expect = 0.46
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 514 AARQKXQEQSPDHGQTRCQHPFSVWSRSHHHYGS 615
++R Q PDH TRC++ VW R H + S
Sbjct: 4 SSRAGGTPQKPDHPPTRCRYQAKVWFRRHCFFQS 37
>02_02_0467 - 10620976-10621299
Length = 107
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 514 AARQKXQEQSPDHGQTRCQHPFSVWSRSHHHYGS 615
++R Q PDH TRC+ VW R H + S
Sbjct: 4 SSRAGGTPQKPDHPPTRCRSQAKVWFRRHCFFQS 37
>07_03_0352 + 17089666-17089982,17090326-17090410,17090674-17090913
Length = 213
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +1
Query: 502 LPVRAARQKXQEQSPDHGQTRCQHPFSVWSRSHHHYGS 615
LP + Q PDH RC+ VW R H + S
Sbjct: 12 LPKNLITRLGTPQKPDHPPIRCRSQAKVWFRRHCFFQS 49
>02_05_0511 +
29644266-29644399,29644502-29644913,29645007-29645075,
29645169-29645333,29645771-29645870,29645906-29646081
Length = 351
Score = 28.7 bits (61), Expect = 4.3
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Frame = +2
Query: 371 VRGEDVYIVQSGSGEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKXKSRAPI 550
+RG+ V + S S + E + +I A + T V+P FP ++ +
Sbjct: 62 IRGQHVAFLASFSSP--SVIFEQISVIFALPKLFIASFTLVLPFFPTGSFERVEEEGDVA 119
Query: 551 TAKLVANILSV-----SGADHIITMDLHASQIQGFF 643
TA +A ILS+ G ++ D+HA Q + +F
Sbjct: 120 TAFTLARILSMIPKSRGGPTSVVIYDIHALQERFYF 155
>06_03_0099 + 16633928-16638213,16638299-16638386,16638823-16638950,
16640008-16640278
Length = 1590
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 520 RQKXQEQSPDHGQTRCQ-HPFSVWSRSHHHYGS 615
R+K + +SP H + + HP +S+ HH +G+
Sbjct: 1554 RKKQKPESPPHAHPQGRNHPVKFFSKMHHMFGT 1586
>02_05_0181 -
26522849-26522932,26523053-26523184,26523263-26523329,
26523800-26524186,26524259-26524360,26524983-26525132,
26525552-26525636,26525743-26525769,26525858-26526116,
26526659-26526751,26526921-26527013,26527122-26527289,
26527436-26527594,26528214-26528273,26528392-26528487
Length = 653
Score = 28.3 bits (60), Expect = 5.6
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +1
Query: 517 ARQKXQEQSPDHGQTRCQHPFSVWSR 594
+ Q ++++PD +T C+ P VWS+
Sbjct: 487 SEQNSEDENPDSSRTACETPKWVWSK 512
>01_06_0474 +
29604201-29604527,29604634-29604988,29605071-29605411,
29606502-29606940,29607558-29607913
Length = 605
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 537 AEPRSRPNSLPTSFQCLEPITSSLWIFMR 623
AEP SRPNS ++ C+ P S+ + R
Sbjct: 382 AEPPSRPNSFTSTSSCMAPSRRSMAVRSR 410
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,275,220
Number of Sequences: 37544
Number of extensions: 307998
Number of successful extensions: 726
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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