Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_P07
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00036-6|AAK29853.1|  377|Caenorhabditis elegans Hypothetical pr...   235   2e-62
U00036-5|AAT92064.1|  446|Caenorhabditis elegans Hypothetical pr...   235   2e-62
U00036-7|AAK29858.2|  319|Caenorhabditis elegans Hypothetical pr...   233   6e-62
U00036-8|AAL06052.1|  318|Caenorhabditis elegans Hypothetical pr...   223   1e-58
Z68014-5|CAA92027.1|  353|Caenorhabditis elegans Hypothetical pr...   124   7e-29

>U00036-6|AAK29853.1|  377|Caenorhabditis elegans Hypothetical
           protein R151.2a protein.
          Length = 377

 Score =  235 bits (576), Expect = 2e-62
 Identities = 114/142 (80%), Positives = 126/142 (88%)
 Frame = +2

Query: 227 RMPNIKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIXXSVRGEDVYIVQSG 406
           RMPNIKVFSGSSHPDL+ +I +RL +++ K   KKFSN ET VEI  SVRGEDVYI+QS 
Sbjct: 58  RMPNIKVFSGSSHPDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSA 117

Query: 407 SGEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKXKSRAPITAKLVANILSVS 586
           +GEINDNLMELLIMINACKIAS+ RV AVIP FPYARQDKK KSRAPI+AKLVAN+LSV+
Sbjct: 118 AGEINDNLMELLIMINACKIASSCRVAAVIPAFPYARQDKKDKSRAPISAKLVANMLSVA 177

Query: 587 GADHIITMDLHASQIQGFFDIP 652
           GADHIITMDLHASQIQGFFDIP
Sbjct: 178 GADHIITMDLHASQIQGFFDIP 199


>U00036-5|AAT92064.1|  446|Caenorhabditis elegans Hypothetical
           protein R151.2d protein.
          Length = 446

 Score =  235 bits (576), Expect = 2e-62
 Identities = 114/142 (80%), Positives = 126/142 (88%)
 Frame = +2

Query: 227 RMPNIKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIXXSVRGEDVYIVQSG 406
           RMPNIKVFSGSSHPDL+ +I +RL +++ K   KKFSN ET VEI  SVRGEDVYI+QS 
Sbjct: 127 RMPNIKVFSGSSHPDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSA 186

Query: 407 SGEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKXKSRAPITAKLVANILSVS 586
           +GEINDNLMELLIMINACKIAS+ RV AVIP FPYARQDKK KSRAPI+AKLVAN+LSV+
Sbjct: 187 AGEINDNLMELLIMINACKIASSCRVAAVIPAFPYARQDKKDKSRAPISAKLVANMLSVA 246

Query: 587 GADHIITMDLHASQIQGFFDIP 652
           GADHIITMDLHASQIQGFFDIP
Sbjct: 247 GADHIITMDLHASQIQGFFDIP 268


>U00036-7|AAK29858.2|  319|Caenorhabditis elegans Hypothetical
           protein R151.2b protein.
          Length = 319

 Score =  233 bits (571), Expect = 6e-62
 Identities = 113/141 (80%), Positives = 125/141 (88%)
 Frame = +2

Query: 230 MPNIKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIXXSVRGEDVYIVQSGS 409
           MPNIKVFSGSSHPDL+ +I +RL +++ K   KKFSN ET VEI  SVRGEDVYI+QS +
Sbjct: 1   MPNIKVFSGSSHPDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSAA 60

Query: 410 GEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKXKSRAPITAKLVANILSVSG 589
           GEINDNLMELLIMINACKIAS+ RV AVIP FPYARQDKK KSRAPI+AKLVAN+LSV+G
Sbjct: 61  GEINDNLMELLIMINACKIASSCRVAAVIPAFPYARQDKKDKSRAPISAKLVANMLSVAG 120

Query: 590 ADHIITMDLHASQIQGFFDIP 652
           ADHIITMDLHASQIQGFFDIP
Sbjct: 121 ADHIITMDLHASQIQGFFDIP 141


>U00036-8|AAL06052.1|  318|Caenorhabditis elegans Hypothetical
           protein R151.2c protein.
          Length = 318

 Score =  223 bits (544), Expect = 1e-58
 Identities = 108/136 (79%), Positives = 120/136 (88%)
 Frame = +2

Query: 245 VFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIXXSVRGEDVYIVQSGSGEIND 424
           VFSGSSHPDL+ +I +RL +++ K   KKFSN ET VEI  SVRGEDVYI+QS +GEIND
Sbjct: 5   VFSGSSHPDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSAAGEIND 64

Query: 425 NLMELLIMINACKIASASRVTAVIPCFPYARQDKKXKSRAPITAKLVANILSVSGADHII 604
           NLMELLIMINACKIAS+ RV AVIP FPYARQDKK KSRAPI+AKLVAN+LSV+GADHII
Sbjct: 65  NLMELLIMINACKIASSCRVAAVIPAFPYARQDKKDKSRAPISAKLVANMLSVAGADHII 124

Query: 605 TMDLHASQIQGFFDIP 652
           TMDLHASQIQGFFDIP
Sbjct: 125 TMDLHASQIQGFFDIP 140


>Z68014-5|CAA92027.1|  353|Caenorhabditis elegans Hypothetical
           protein W04G3.5 protein.
          Length = 353

 Score =  124 bits (298), Expect = 7e-29
 Identities = 56/136 (41%), Positives = 94/136 (69%)
 Frame = +2

Query: 245 VFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIXXSVRGEDVYIVQSGSGEIND 424
           + +G+SHP+LA+ + +RL I LG+      +N ET V+I  SVRG+ V+I+QSGS  +N+
Sbjct: 13  LLTGNSHPELAKMVSERLEIRLGEATVYNKTNRETSVDIKQSVRGKHVFILQSGSKNVNN 72

Query: 425 NLMELLIMINACKIASASRVTAVIPCFPYARQDKKXKSRAPITAKLVANILSVSGADHII 604
           ++MELL++I ACK + +  +T ++P  PY++Q +  + R+ I  KLVA ++  +GA  ++
Sbjct: 73  DVMELLVLIYACKTSMSKTITVIMPYLPYSKQCRMLR-RSSIAMKLVAEMICKAGASRLV 131

Query: 605 TMDLHASQIQGFFDIP 652
           ++DL+  +IQGFF  P
Sbjct: 132 SLDLYKKEIQGFFSCP 147


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,487,887
Number of Sequences: 27780
Number of extensions: 251334
Number of successful extensions: 609
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 608
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)