Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_P07
(653 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g35390.2 68415.m04339 ribose-phosphate pyrophosphokinase 1 / ... 155 3e-38
At2g35390.1 68415.m04338 ribose-phosphate pyrophosphokinase 1 / ... 155 3e-38
At2g44530.1 68415.m05539 ribose-phosphate pyrophosphokinase, put... 152 2e-37
At1g32380.1 68414.m03995 ribose-phosphate pyrophosphokinase 2 / ... 151 5e-37
At1g10700.1 68414.m01217 ribose-phosphate pyrophosphokinase 3 / ... 40 0.001
At3g50230.1 68416.m05493 leucine-rich repeat transmembrane prote... 30 1.5
At5g66950.1 68418.m08440 expressed protein 29 2.7
At3g60330.1 68416.m06743 ATPase, plasma membrane-type, putative ... 28 4.7
>At2g35390.2 68415.m04339 ribose-phosphate pyrophosphokinase 1 /
phosphoribosyl diphosphate synthetase 1 (PRSI) identical
to phosphoribosyl diphosphate synthetase 1
(ribose-phosphate pyrophosphokinase 1 (PRS I)
[Arabidopsis thaliana] GI:633140, SP|Q42581
Length = 403
Score = 155 bits (375), Expect = 3e-38
Identities = 74/138 (53%), Positives = 103/138 (74%)
Frame = +2
Query: 239 IKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIXXSVRGEDVYIVQSGSGEI 418
+K+FSG+++P LAQ+I +G+DLGKV K+F++ E V++ SVRG DVY+VQ
Sbjct: 93 LKLFSGTANPALAQEIAWYMGLDLGKVNIKRFADGEIYVQLQESVRGCDVYLVQPTCTPT 152
Query: 419 NDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKXKSRAPITAKLVANILSVSGADH 598
N+NLMELLIM++AC+ ASA +VTAVIP F YAR D+K + R I AKLVAN+++ +GAD
Sbjct: 153 NENLMELLIMVDACRRASAKKVTAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADR 212
Query: 599 IITMDLHASQIQGFFDIP 652
++ DLH+ Q G+FDIP
Sbjct: 213 VLACDLHSGQSMGYFDIP 230
>At2g35390.1 68415.m04338 ribose-phosphate pyrophosphokinase 1 /
phosphoribosyl diphosphate synthetase 1 (PRSI) identical
to phosphoribosyl diphosphate synthetase 1
(ribose-phosphate pyrophosphokinase 1 (PRS I)
[Arabidopsis thaliana] GI:633140, SP|Q42581
Length = 352
Score = 155 bits (375), Expect = 3e-38
Identities = 74/138 (53%), Positives = 103/138 (74%)
Frame = +2
Query: 239 IKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIXXSVRGEDVYIVQSGSGEI 418
+K+FSG+++P LAQ+I +G+DLGKV K+F++ E V++ SVRG DVY+VQ
Sbjct: 42 LKLFSGTANPALAQEIAWYMGLDLGKVNIKRFADGEIYVQLQESVRGCDVYLVQPTCTPT 101
Query: 419 NDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKXKSRAPITAKLVANILSVSGADH 598
N+NLMELLIM++AC+ ASA +VTAVIP F YAR D+K + R I AKLVAN+++ +GAD
Sbjct: 102 NENLMELLIMVDACRRASAKKVTAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADR 161
Query: 599 IITMDLHASQIQGFFDIP 652
++ DLH+ Q G+FDIP
Sbjct: 162 VLACDLHSGQSMGYFDIP 179
>At2g44530.1 68415.m05539 ribose-phosphate pyrophosphokinase,
putative / phosphoribosyl diphosphate synthetase,
putative very strong similarity to phosphoribosyl
pyrophosphate synthase [Spinacia oleracea] GI:4902849;
contains Pfam profile PF00156: Phosphoribosyl
transferase domain
Length = 394
Score = 152 bits (369), Expect = 2e-37
Identities = 72/138 (52%), Positives = 102/138 (73%)
Frame = +2
Query: 239 IKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIXXSVRGEDVYIVQSGSGEI 418
+++FSG+++P LAQ+I LG+DLGK+ K+F++ E V++ SVRG DV++VQ
Sbjct: 78 LRIFSGTANPILAQEISCYLGLDLGKIKIKRFADGEIYVQLQESVRGCDVFLVQPTCPPA 137
Query: 419 NDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKXKSRAPITAKLVANILSVSGADH 598
N+NLMELL+MI+AC+ ASA +TAVIP F YAR D+K + R I AKLVAN+++ SGAD
Sbjct: 138 NENLMELLVMIDACRRASAKTITAVIPYFGYARADRKTQGRESIAAKLVANLITQSGADR 197
Query: 599 IITMDLHASQIQGFFDIP 652
++ DLH+ Q G+FDIP
Sbjct: 198 VLACDLHSGQSMGYFDIP 215
>At1g32380.1 68414.m03995 ribose-phosphate pyrophosphokinase 2 /
phosphoribosyl diphosphate synthetase 2 (PRS2) identical
to SP:Q42583 from [Arabidopsis thaliana]; strong
similarity to phosphoribosyl diphosphate synthetase 1
(ribose-phosphate pyrophosphokinase 1 (PRS I)
[Arabidopsis thaliana] GI:633140, SP|Q42581
Length = 400
Score = 151 bits (365), Expect = 5e-37
Identities = 71/138 (51%), Positives = 103/138 (74%)
Frame = +2
Query: 239 IKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIXXSVRGEDVYIVQSGSGEI 418
+K+FSG+++P L+Q+I +G++LGKV K+F++ E V++ SVRG DV++VQ
Sbjct: 90 LKLFSGTANPALSQEIAWYMGLELGKVSIKRFADGEIYVQLKESVRGCDVFLVQPTCTPT 149
Query: 419 NDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKXKSRAPITAKLVANILSVSGADH 598
N+NLMELLIM++AC+ ASA +VTAVIP F YAR D+K + R I AKLVAN+++ +GAD
Sbjct: 150 NENLMELLIMVDACRRASAKKVTAVIPYFGYARADRKTQGRESIAAKLVANLITEAGADR 209
Query: 599 IITMDLHASQIQGFFDIP 652
++ DLH+ Q G+FDIP
Sbjct: 210 VLACDLHSGQSMGYFDIP 227
>At1g10700.1 68414.m01217 ribose-phosphate pyrophosphokinase 3 /
phosphoribosyl diphosphate synthetase 3 (PRS3) nearly
identical to phosphoribosyl diphosphate synthase
GI:4902470 from [Arabidopsis thaliana]
Length = 411
Score = 40.3 bits (90), Expect = 0.001
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 8/141 (5%)
Frame = +2
Query: 245 VFSGSSHPDLAQKIVDRLG-IDLGKVVTKKFSN--METCVEIXXSVRGEDVYIVQSGSGE 415
+F DLA++IV + I+L + KKF + ++ +RG+ V + S S
Sbjct: 103 LFHSDETRDLAERIVAKSDCIELRSINWKKFDDGFPNLFIQNAQGIRGQHVAFLASFSSP 162
Query: 416 INDNLMELLIMINACKIASASRVTAVIPCFPYA----RQDKKXKSRAPITAKLVANI-LS 580
+ E L +I A S T V+P FP +D+ + A A++++NI S
Sbjct: 163 AV--IFEQLSVIYALPKLFVSSFTLVLPFFPTGTSERMEDEGDVATAFTLARILSNIPTS 220
Query: 581 VSGADHIITMDLHASQIQGFF 643
G ++T D+HA Q + +F
Sbjct: 221 RGGPTSLVTFDIHALQERFYF 241
>At3g50230.1 68416.m05493 leucine-rich repeat transmembrane protein
kinase, putative receptor-like protein kinase (RKL1),
Arabidopsis thaliana, EMBL:AF084034
Length = 660
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = +2
Query: 104 ISVLSLRIAPLATTSGLVSMKSTITLXDVXNKLXHVLPLTTRMPNIKVFSGSSHPDLAQK 283
+S L+L L T +++ S I+ N L ++PLT + S SS+P L +
Sbjct: 172 LSSLNLEFNRLNGTLPPLNLSSLISFNVSSNNLTGLVPLTKTLLRFNASSFSSNPGLCGE 231
Query: 284 IVDR 295
I++R
Sbjct: 232 IINR 235
>At5g66950.1 68418.m08440 expressed protein
Length = 870
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 251 SGSSHPDLAQKIVDRLGIDLG 313
SG HP++ QK+ +R GI LG
Sbjct: 766 SGMVHPEIVQKLAEREGISLG 786
>At3g60330.1 68416.m06743 ATPase, plasma membrane-type, putative /
proton pump, putative similar to P-type
H(+)-transporting ATPase from Nicotiana plumbaginifolia
[SP|Q08435, SP|Q08436], Lycopersicon esculentum
[GI:5901757, SP|P22180], Solanum tuberosum [GI:435003];
contains InterPro accession IPR001757: ATPase, E1-E2
type
Length = 961
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = -2
Query: 427 VVVDLSAAALYDVHIFAAYRXSYFNARFHITEFFGYNFTEIDAQTVDNLLSQI 269
VV+ A + V +AAY ++F+ FH+ F ++F D + +L Q+
Sbjct: 714 VVLGAYLAIMTVVFFWAAYETNFFHNIFHVRNFNQHHFKMKDKKVAAHLNEQM 766
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,751,775
Number of Sequences: 28952
Number of extensions: 236638
Number of successful extensions: 549
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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