Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_P04
         (363 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   1.7  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   1.7  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   1.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   3.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   6.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   6.8  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    20   6.8  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 10  VSTRIQKNLNTKLIHNFNNLIQFKTSNSKN 99
           ++ R   N +T L  +F N++    SNSK+
Sbjct: 178 INCRAVGNASTALAESFQNVLVPTASNSKS 207


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 10  VSTRIQKNLNTKLIHNFNNLIQFKTSNSKN 99
           ++ R   N +T L  +F N++    SNSK+
Sbjct: 178 INCRAVGNASTALAESFQNVLVPTASNSKS 207


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 10  VSTRIQKNLNTKLIHNFNNLIQFKTSNSKN 99
           ++ R   N +T L  +F N++    SNSK+
Sbjct: 178 INCRAVGNASTALAESFQNVLVPTASNSKS 207


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 130 GENCELDVGD 101
           G+NCEL+V D
Sbjct: 216 GQNCELNVDD 225


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 183  MRIVPNDIGQSRP 221
            M I PN + Q+RP
Sbjct: 1426 MSIAPNRVSQARP 1438


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 183  MRIVPNDIGQSRP 221
            M I PN + Q+RP
Sbjct: 1426 MSIAPNRVSQARP 1438


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = +2

Query: 107 DIQLAVFSNILGVSIFLLVILYHYINA 187
           DI+ +   ++LG +   L+I+  + N+
Sbjct: 327 DIERSTILSVLGTACTFLIIIVQFRNS 353


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,161
Number of Sequences: 336
Number of extensions: 1286
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7404950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)