BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P02_F_P04 (363 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_01_0178 - 1223725-1223736,1223900-1224025,1224404-1224649,122... 28 2.6 08_01_0441 + 3890231-3890845,3891253-3894220,3906625-3906713,390... 27 4.5 01_06_0881 + 32692345-32692497,32693167-32693286,32693382-326934... 27 4.5 11_04_0320 + 16354122-16354226,16354652-16356859 27 6.0 05_03_0297 - 11911699-11911772,11911987-11912072,11912245-119123... 26 7.9 >02_01_0178 - 1223725-1223736,1223900-1224025,1224404-1224649, 1224731-1224922,1225059-1225138,1225233-1226826 Length = 749 Score = 27.9 bits (59), Expect = 2.6 Identities = 18/48 (37%), Positives = 27/48 (56%) Frame = +2 Query: 98 MITDIQLAVFSNILGVSIFLLVILYHYINANSSK*YRSIAAIVKALVS 241 +ITDI+ + L V +F + H +NA SS+ ++ A VK LVS Sbjct: 438 LITDIEKIAEAAFLMVVVFSAEVTKHRLNAKSSEGFQPDVA-VKILVS 484 >08_01_0441 + 3890231-3890845,3891253-3894220,3906625-3906713, 3908317-3908337 Length = 1230 Score = 27.1 bits (57), Expect = 4.5 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = +1 Query: 40 TKLIHNFNNLIQFKTSNSKNDHRHPARSFLQHFGSLHILISYPVSLHKCE*FQMI 204 T+ +H FN L ++ + +ND + FL G L+ +SYP+ + FQ + Sbjct: 385 TEYLHEFNRLARYAPEDVRNDEERQEK-FL---GGLNDELSYPLMVGDYPDFQKL 435 >01_06_0881 + 32692345-32692497,32693167-32693286,32693382-32693474, 32694197-32694283,32696052-32696063,32696553-32696625, 32697073-32697182,32697608-32697658,32698154-32698242, 32698518-32698599,32698680-32698793,32699015-32699094, 32699749-32699884,32700210-32700280,32700363-32700457, 32700467-32700597,32701009-32701398 Length = 628 Score = 27.1 bits (57), Expect = 4.5 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Frame = +1 Query: 61 NNLIQFKTSNSKN-DHRHPARSFLQHFGSLHILISYPVS 174 +N IQ + +S+N D H +S +Q S ILIS+PV+ Sbjct: 520 DNSIQQNSGSSENLDESHVIKSSVQAQSSSVILISHPVA 558 >11_04_0320 + 16354122-16354226,16354652-16356859 Length = 770 Score = 26.6 bits (56), Expect = 6.0 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Frame = +2 Query: 116 LAVFSNILGVSIFLLVILY-HYINANSSK*-YRSIAAIVKALVSLIKKCALY*DVNKSF 286 L FS+IL V ++ + I+A + K + S + ALV++ KC D NK+F Sbjct: 393 LFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAF 451 >05_03_0297 - 11911699-11911772,11911987-11912072,11912245-11912332, 11912592-11912719,11913540-11913961,11931803-11932423 Length = 472 Score = 26.2 bits (55), Expect = 7.9 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = +1 Query: 40 TKLIHNFNNLIQFKTSNSKNDHRHPARSFLQHFGSLHILISYPV 171 T+ +H FN L ++ + +ND + FL G L+ +SYP+ Sbjct: 167 TEYLHEFNRLARYAPEDVRNDEERQEK-FL---GGLNDELSYPL 206 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,129,020 Number of Sequences: 37544 Number of extensions: 116785 Number of successful extensions: 229 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 227 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 229 length of database: 14,793,348 effective HSP length: 73 effective length of database: 12,052,636 effective search space used: 566473892 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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