BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P02_F_P04 (363 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin prepr... 24 0.48 DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein ... 20 7.8 AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 20 7.8 >AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin preprohormone protein. Length = 107 Score = 24.2 bits (50), Expect = 0.48 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 4/36 (11%) Frame = +1 Query: 22 IQKNLNTKLIHNFNNLIQFK----TSNSKNDHRHPA 117 +Q N+N +L L+ F + N NDHR PA Sbjct: 66 LQGNINNQLFQTPCELLNFPKRSFSENMINDHRQPA 101 >DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein 5 protein. Length = 104 Score = 20.2 bits (40), Expect = 7.8 Identities = 7/16 (43%), Positives = 11/16 (68%) Frame = +1 Query: 208 VNRGHCKSIGVSNKKM 255 ++RGHC IG K++ Sbjct: 41 LDRGHCDVIGKKIKEL 56 >AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic acetylcholine receptoralpha-3 protein. Length = 537 Score = 20.2 bits (40), Expect = 7.8 Identities = 10/33 (30%), Positives = 14/33 (42%) Frame = -2 Query: 263 IKHIFLLETPMLLQWPRLTYIIWNYSHLCSDTG 165 ++ +FL P LL R Y Y D+G Sbjct: 350 VRQVFLNWMPRLLMMRRTPYSTPEYDDTYMDSG 382 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 74,907 Number of Sequences: 438 Number of extensions: 1309 Number of successful extensions: 3 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3 length of database: 146,343 effective HSP length: 51 effective length of database: 124,005 effective search space used: 8556345 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 39 (20.8 bits)
- SilkBase 1999-2023 -