Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_P03
(653 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 246 2e-66
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 208 4e-55
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 184 8e-48
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 145 4e-36
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 136 3e-33
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 127 2e-30
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 123 2e-29
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 120 2e-28
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 112 4e-26
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 87 3e-18
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 83 4e-17
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 75 7e-15
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 74 2e-14
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 73 4e-14
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 71 1e-13
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 70 3e-13
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 65 7e-12
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 63 4e-11
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 58 1e-09
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 56 6e-09
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 53 4e-08
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 34 0.016
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 29 0.59
SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase Alg6|Schizosac... 26 4.1
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 26 4.1
SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 26 4.1
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 26 5.5
SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces p... 26 5.5
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 26 5.5
SPAC27D7.08c |||DUF890 family protein|Schizosaccharomyces pombe|... 25 7.2
SPAC23A1.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 9.5
SPBC20F10.06 |mad2||spindle checkpoint protein Mad2|Schizosaccha... 25 9.5
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 246 bits (603), Expect = 2e-66
Identities = 115/180 (63%), Positives = 148/180 (82%), Gaps = 1/180 (0%)
Frame = +3
Query: 78 KTYDCLFKLLLIGDSGVGKTSILFXFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 257
K+YD L KLLLIGDSGVGK+ +L FSED+F SFI+TIGIDFKIRTI+LDGK++KLQIW
Sbjct: 4 KSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIW 63
Query: 258 DTAGQERFRTITTAYYRGSMGIMLVYDVTNXKSFENIKNWIRNIEXNASADVXKMILGNK 437
DTAGQERFRTITTAYYRG+MGI+L+YDVT+ KSF+N++ W N+E +AS +V K+++GNK
Sbjct: 64 DTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNK 123
Query: 438 CDLXSQRQVSKERGEQLAIXYXIKFVETSAKDSLNVEYAFYTLXRDI-KAKMEKKQEASN 614
CD QRQVS E+G+ LA +KF+E SAK ++NV+ AF+TL R+I K K++ + E SN
Sbjct: 124 CDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQKIDAENEFSN 183
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 208 bits (509), Expect = 4e-55
Identities = 99/181 (54%), Positives = 131/181 (72%)
Frame = +3
Query: 72 MAKTYDCLFKLLLIGDSGVGKTSILFXFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 251
M YD LFKLLLIGDSGVGK+ +L F++D + S+ISTIG+DFKIRT +L+GK VKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQ 60
Query: 252 IWDTAGQERFRTITTAYYRGSMGIMLVYDVTNXKSFENIKNWIRNIEXNASADVXKMILG 431
IWDTAGQERFRTIT++YYRG+ GI++VYDVT+ SF N+K W++ I+ A V ++++G
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVG 120
Query: 432 NKCDLXSQRQVSKERGEQLAIXYXIKFVETSAKDSLNVEYAFYTLXRDIKAKMEKKQEAS 611
NK D+ ++ V ++ A I F+ETSAKDS NVE AF T+ R IK +M AS
Sbjct: 121 NKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFAS 180
Query: 612 N 614
+
Sbjct: 181 S 181
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 184 bits (449), Expect = 8e-48
Identities = 88/195 (45%), Positives = 127/195 (65%), Gaps = 5/195 (2%)
Frame = +3
Query: 84 YDCLFKLLLIGDSGVGKTSILFXFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 263
YD LFK +LIGDSGVGK+++L F+ + FNI STIG++F R I LD KK+K QIWDT
Sbjct: 7 YDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDT 66
Query: 264 AGQERFRTITTAYYRGSMGIMLVYDVTNXKSFENIKNWIRNIEXNASADVXKMILGNKCD 443
AGQER+R IT+AYYRG++G ++VYD+T SF+N+ W++ + +A +++ M++GNK D
Sbjct: 67 AGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTD 126
Query: 444 LXSQRQVSKERGEQLAIXYXIKFVETSAKDSLNVEYAFYTLXRDI-----KAKMEKKQEA 608
L R VS E + A + F+ETSA D+ NVE AF T+ +I +E +
Sbjct: 127 LLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGDDG 186
Query: 609 SNPSGGXSGVHKPTL 653
+P+ G + PT+
Sbjct: 187 VHPTAGQTLNIAPTM 201
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 145 bits (352), Expect = 4e-36
Identities = 69/154 (44%), Positives = 102/154 (66%)
Frame = +3
Query: 96 FKLLLIGDSGVGKTSILFXFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 275
FKL+ +G+ VGKTS++ F D F+ ++ +TIGIDF +T+ L+ + V+LQ+WDTAGQE
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71
Query: 276 RFRTITTAYYRGSMGIMLVYDVTNXKSFENIKNWIRNIEXNASADVXKMILGNKCDLXSQ 455
RFR++ +Y R S ++VYD+TN SF N + WI ++ DV +++GNK DL +
Sbjct: 72 RFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADK 131
Query: 456 RQVSKERGEQLAIXYXIKFVETSAKDSLNVEYAF 557
RQV++E GE+ A I +ETSAK NV+ F
Sbjct: 132 RQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLF 165
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 136 bits (328), Expect = 3e-33
Identities = 71/177 (40%), Positives = 106/177 (59%), Gaps = 5/177 (2%)
Frame = +3
Query: 78 KTYDCLFKLLLIGDSGVGKTSILFXFSEDAFNISFISTIGIDFKIRTIDL----DGKKVK 245
++YD L K++L G SG GK+ +L F ++ ++ T+GIDF R I + K++K
Sbjct: 4 ESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIK 63
Query: 246 LQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNXKSFENIKNWIRNIEXNASADVXKMI 425
LQIWDTAGQE+FR++ YYRG+ G +LVYDVTN SFE + +W+ +I A + + ++
Sbjct: 64 LQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVL 123
Query: 426 LGNKCDLXSQRQVSKERGEQLAIXYXIKFV-ETSAKDSLNVEYAFYTLXRDIKAKME 593
G+K DL +QRQVS E + I ETS+ NVE F ++ I ++E
Sbjct: 124 AGSKSDLQNQRQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTIITRIE 180
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 127 bits (306), Expect = 2e-30
Identities = 71/180 (39%), Positives = 108/180 (60%), Gaps = 6/180 (3%)
Frame = +3
Query: 93 LFKLLLIGDSGVGKTSILFXFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 272
L K++++G+SGVGKTSI+ + F+ + +TIG DF + + +D K V LQ+WDTAGQ
Sbjct: 8 LLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQ 67
Query: 273 ERFRTITTAYYRGSMGIMLVYDVTNXKSFENIKNWIRNIEXNASADVXK----MILGNKC 440
ERF+++ A+YRG+ +LVYDV N KSFE + +W AS + ++LGNK
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKV 127
Query: 441 DLXSQ-RQVSKERGEQLA-IXYXIKFVETSAKDSLNVEYAFYTLXRDIKAKMEKKQEASN 614
D+ Q R VSK + I + ETSAK+++NV+ AF T+ + M+ A++
Sbjct: 128 DVEEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALENMDSDDIAAD 187
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 123 bits (297), Expect = 2e-29
Identities = 64/162 (39%), Positives = 96/162 (59%), Gaps = 2/162 (1%)
Frame = +3
Query: 99 KLLLIGDSGVGKTSILFXFSEDAFNISFISTIGIDFKIRTIDLD-GKKVKLQIWDTAGQE 275
KL+L+GDS VGK+S++ F +D F+ STIG F +T+ +D VKL+IWDTAGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 276 RFRTITTAYYRGSMGIMLVYDVTNXKSFENIKNWIRNIEXNASADVXKMILGNKCDLXSQ 455
R++++ YYR + ++VYD+T S E K+WI+ ++ A + + GNK DL +
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQE 135
Query: 456 RQ-VSKERGEQLAIXYXIKFVETSAKDSLNVEYAFYTLXRDI 578
R+ V K E A + F ETSAK + NV F + + +
Sbjct: 136 RRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKL 177
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 120 bits (288), Expect = 2e-28
Identities = 67/179 (37%), Positives = 102/179 (56%), Gaps = 1/179 (0%)
Frame = +3
Query: 72 MAKTYDCLFKLLLIGDSGVGKTSILFXFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 251
M TY +KL+++GD GVGK+++ + F + TI ++ + ++DG+ L
Sbjct: 1 MRSTYLREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYR-KKCEIDGEGALLD 59
Query: 252 IWDTAGQERFRTITTAYYRGSMGIMLVYDVTNXKSFENIKNWIRNIEXNASADVXKMIL- 428
+ DTAGQE + + Y R G +LVY++T+ SF+ I + + I D ++L
Sbjct: 60 VLDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLV 119
Query: 429 GNKCDLXSQRQVSKERGEQLAIXYXIKFVETSAKDSLNVEYAFYTLXRDIKAKMEKKQE 605
NKCDL ++R VS+ GEQLA +VETSAK LNVE AFY+L R I+ + K +E
Sbjct: 120 ANKCDLEAERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTIR-RYNKSEE 177
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 112 bits (270), Expect = 4e-26
Identities = 63/165 (38%), Positives = 99/165 (60%), Gaps = 7/165 (4%)
Frame = +3
Query: 99 KLLLIGDSGVGKTSILFXFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 278
K++++GDSGVGKT ++ F F+ + +TIG DF + + +D K V LQ+WDTAGQER
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 279 FRTITTAYYRGSMGIMLVYDVTNXKSFENIKNWIRNIEXNASADVXK---MILGNKCDL- 446
F+++ A+YRG+ ++VY+V N KSF++++NW + S D +I+GN+ D
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQIDKD 129
Query: 447 XSQRQVSKERG-EQLAIXYXIKFV--ETSAKDSLNVEYAFYTLXR 572
S+R VS R + + + E SAK++ NV F T+ R
Sbjct: 130 ASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSR 174
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 86.6 bits (205), Expect = 3e-18
Identities = 56/177 (31%), Positives = 92/177 (51%), Gaps = 1/177 (0%)
Frame = +3
Query: 99 KLLLIGDSGVGKTSILFXFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 278
++ ++G VGK+S+ + E+ F S+ TI F + I G++ +I DTAGQ+
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFS-KNIKYKGQEFATEIIDTAGQDE 66
Query: 279 FRTITTAYYRGSMGIMLVYDVTNXKSFENIKNWIRNIEXNASAD-VXKMILGNKCDLXSQ 455
+ + + + G G +LVY +T+ SFE +K I + + V +++GNK DL Q
Sbjct: 67 YSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQ 126
Query: 456 RQVSKERGEQLAIXYXIKFVETSAKDSLNVEYAFYTLXRDIKAKMEKKQEASNPSGG 626
R V+ E G+ LA + + E SA+ + NV AF + +I EK+ S P G
Sbjct: 127 RAVTAEEGKALANEWKCAWTEASARHNENVARAFELIISEI----EKQANPSPPGDG 179
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 82.6 bits (195), Expect = 4e-17
Identities = 47/162 (29%), Positives = 88/162 (54%), Gaps = 1/162 (0%)
Frame = +3
Query: 96 FKLLLIGDSGVGKTSILFXFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 275
FKL+L+GD G GKT+ + F +I+T+G++ + ++ +WDTAGQE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69
Query: 276 RFRTITTAYY-RGSMGIMLVYDVTNXKSFENIKNWIRNIEXNASADVXKMILGNKCDLXS 452
+ + YY +G GI +++DVT+ +++N+ +W R++ ++ ++ GNK D+
Sbjct: 70 KLGGLRDGYYIQGQCGI-IMFDVTSRITYKNVPHWWRDL-VRVCENIPIVLCGNKVDV-K 126
Query: 453 QRQVSKERGEQLAIXYXIKFVETSAKDSLNVEYAFYTLXRDI 578
+R+V K + +++ + SAK + N E F L R +
Sbjct: 127 ERKV-KAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 167
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 75.4 bits (177), Expect = 7e-15
Identities = 53/187 (28%), Positives = 98/187 (52%), Gaps = 14/187 (7%)
Frame = +3
Query: 99 KLLLIGDSGVGKTSILFXFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 278
KL+++GD GKT +L FS+ F ++ T+ ++ + +++DG+ ++L +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHIELALWDTAGQED 66
Query: 279 FRTITTAYYRGSMGIMLVYDVTNXKSFENI-KNWIRNIEXNASADVXKMILGNKCDL--- 446
+ + Y S +++ + V +S +N+ + WI + + +++ +++G K DL
Sbjct: 67 YDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEV-LHFCSNLPILLVGCKVDLRND 125
Query: 447 ---------XSQRQVSKERGEQLAIXY-XIKFVETSAKDSLNVEYAFYTLXRDIKAKMEK 596
SQ+ ++ E G+ +A K++E SAK + V F T R A M K
Sbjct: 126 PKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEVFETAAR---ASMLK 182
Query: 597 KQEASNP 617
+ AS P
Sbjct: 183 FKPASVP 189
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 73.7 bits (173), Expect = 2e-14
Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 14/190 (7%)
Frame = +3
Query: 99 KLLLIGDSGVGKTSILFXFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 278
KL+++GD GKT +L FS+ F ++ T+ ++ + +++DG+ V+L +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHVELALWDTAGQED 66
Query: 279 FRTITTAYYRGSMGIMLVYDVTNXKSFENI-KNWIRNIEXNASADVXKMILGNKCDL--- 446
+ + Y S I++ + V + S +N+ + WI + + + + +++ K DL
Sbjct: 67 YDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEV-LHFCSSLPILLVACKADLRND 125
Query: 447 ---------XSQRQVSKERGEQLAIXY-XIKFVETSAKDSLNVEYAFYTLXRDIKAKMEK 596
+Q V+ E G+ +A K++E SAK + V F + R A M K
Sbjct: 126 PKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVFESATR---AAMLK 182
Query: 597 KQEASNPSGG 626
+ PS G
Sbjct: 183 HKPKVKPSSG 192
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 72.9 bits (171), Expect = 4e-14
Identities = 52/163 (31%), Positives = 84/163 (51%), Gaps = 10/163 (6%)
Frame = +3
Query: 99 KLLLIGDSGVGKTSILFXFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 278
K++++GD GKTS+L F++ F + TI ++ I I +DG ++L +WDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENY-IHDIFVDGNSIELSLWDTAGQEE 73
Query: 279 FRTITTAYYRGSMGIMLVYDVTNXKSFEN-IKNWIRNIEXNASADVXKMILGNKCDL--X 449
+ + + Y + IM+ + V + S EN I W+ + N V +++ KCDL
Sbjct: 74 YDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPG-VKLVLVALKCDLRGA 132
Query: 450 SQRQVSKER----GEQLAIXYXI---KFVETSAKDSLNVEYAF 557
+ QV + E LA I +++E SAK + V AF
Sbjct: 133 DEEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAF 175
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 71.3 bits (167), Expect = 1e-13
Identities = 40/167 (23%), Positives = 79/167 (47%), Gaps = 6/167 (3%)
Frame = +3
Query: 75 AKTYDCLFKLLLIGDSGVGKTSILFXFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQI 254
A+ + K+ +IGDS +GKTS++ + + +F+ T+G++F +TI + ++ I
Sbjct: 4 ARKNNVTIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSI 63
Query: 255 WDTAGQERFRTITTAYYRGSMGIMLVYDVTNXKSFENIKNWIRNIEXNASADVXKMILGN 434
WD GQ F + ++ I+ ++D++ + +IK W R + +++G
Sbjct: 64 WDLGGQREFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQAR-GFNKTAVPILIGT 122
Query: 435 KCD------LXSQRQVSKERGEQLAIXYXIKFVETSAKDSLNVEYAF 557
K D Q +++K+ + A V S S+NV+ F
Sbjct: 123 KYDHFMTFPREDQEEITKQ-ARRYAKAMKASLVFCSTSHSINVQKIF 168
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 69.7 bits (163), Expect = 3e-13
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
Frame = +3
Query: 99 KLLLIGDSGVGKTSILFXFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 278
KL+++GD GKTS+L F+ F ++ T+ ++ + +DGK V+L +WDTAGQE
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENY-VSDCRVDGKSVQLALWDTAGQEE 68
Query: 279 FRTITTAYYRGSMGIMLVYDVTNXKSFENIK-NWIRNIEXNASADVXKMILGNKCDLXS 452
+ + Y + I++ + + + S EN+ WI I +V +++G K DL S
Sbjct: 69 YERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEIN-TLCPNVPFILVGMKADLRS 126
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 65.3 bits (152), Expect = 7e-12
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Frame = +3
Query: 99 KLLLIGDSGVGKTSILFXFSEDAFNISFISTIGIDFKIR-TIDLDGKKVKLQIWDTAGQE 275
KL+++GD G GKT +L FS F ++ T+ ++ T + K ++L +WDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 276 RFRTITTAYYRGSMGIMLVYDVTNXKSFENI-KNWIRNIEXNASADVXKMILGNKCDLXS 452
+ + Y S I+L + + S N+ + W ++ + +++G K DL
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQ-HFCPRTPIVLVGLKADLRK 134
Query: 453 QRQ------------VSKERGEQLAIXYXIKFVETSAKDSLNVEYAF 557
R V+ ++ + +A+ +VE SAK++ V F
Sbjct: 135 DRNATEVLRTQGLTPVTYQQAQSVALSMNAPYVECSAKENTGVNEVF 181
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 62.9 bits (146), Expect = 4e-11
Identities = 44/167 (26%), Positives = 83/167 (49%), Gaps = 14/167 (8%)
Frame = +3
Query: 99 KLLLIGDSGVGKTSILFXFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 278
K +++GD VGKT +L ++ + F ++ T+ ++ + T+ + + L ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAV-TVMIGDEPYTLGLFDTAGQED 63
Query: 279 FRTITTAYYRGSMGIMLVYDVTNXKSFENIK-NWIRNIEXNASADVXKMILGNKCDLXS- 452
+ + Y + ++ + VT+ SFEN+K W + + V +I+G + DL
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPG-VPCLIVGTQIDLRDD 122
Query: 453 -----------QRQVSKERGEQLAIXY-XIKFVETSAKDSLNVEYAF 557
Q ++ E+GE+LA +K+VE SA ++ F
Sbjct: 123 PSVQQKLARQHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVF 169
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 57.6 bits (133), Expect = 1e-09
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
Frame = +3
Query: 99 KLLLIGDSGVGKTSILFXFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 278
++L++G GKT+IL+ N S ++ + F + T+ K +K +WD GQ++
Sbjct: 23 RILMLGLDAAGKTTILYKLK---LNQSVVTIPTVGFNVETVTY--KNIKFNVWDVGGQDK 77
Query: 279 FRTITTAYYRGSMGIMLVYDVTNXKSFENIKNWI-RNIEXNASADVXKMILGNKCDL 446
R + Y+ G+ G++ V D + + + R I D ++L NK DL
Sbjct: 78 IRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDL 134
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 55.6 bits (128), Expect = 6e-09
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 5/178 (2%)
Frame = +3
Query: 63 VVKMAKTYDCLFKLLLIGDSGVGKTSIL-FXFSEDAFNISFISTIGIDFKIRTIDLDGKK 239
+++ K + ++LL+G GKT+IL +ED +S T G F+IRT++++G
Sbjct: 6 ILRQQKLKEREVRVLLLGLDNAGKTTILKCLLNEDVNEVS--PTFG--FQIRTLEVEG-- 59
Query: 240 VKLQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNXKSFENIKNWIRNIEXNASADVXK 419
++ IWD GQ+ R Y+ + I+ V D + E +N ++ +
Sbjct: 60 LRFTIWDIGGQKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELLVEEKLLFTS 119
Query: 420 -MILGNKCDL---XSQRQVSKERGEQLAIXYXIKFVETSAKDSLNVEYAFYTLXRDIK 581
++L NK D+ S ++SK + SA LN++ A L D+K
Sbjct: 120 ILVLANKSDVSGALSSEEISKILNISKYKSSHWRIFSVSALTGLNIKDAISWLANDLK 177
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 52.8 bits (121), Expect = 4e-08
Identities = 29/117 (24%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Frame = +3
Query: 99 KLLLIGDSGVGKTSILFXFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 278
++L++G GKT+IL+ ++ I TIG F + T++ + + +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIG--FNVETVEY--RNISFTVWDVGGQDK 73
Query: 279 FRTITTAYYRGSMGIMLVYDVTNXKSFENIKNWI-RNIEXNASADVXKMILGNKCDL 446
R + Y++ + GI+ V D + + + R + + D ++ NK DL
Sbjct: 74 IRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQRMLNEDELRDALLLVFANKQDL 130
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 34.3 bits (75), Expect = 0.016
Identities = 36/159 (22%), Positives = 69/159 (43%), Gaps = 5/159 (3%)
Frame = +3
Query: 99 KLLLIGDSGVGKTSILFXFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 278
++++ GD GVGK+S++ ++ N++ I + I + V L + DT
Sbjct: 5 RVVICGDQGVGKSSLISALIQED-NVTSIPKVFPIISIPSNPDSNDDVSLVLVDTQSDSN 63
Query: 279 FRTITTAYYRGSMGIMLVYDVTNXKSFENIKNWIRNIEXNASADVXKMILGNKC-DLXSQ 455
R A + + I LVY ++ S+E + + + +V ++ NK DL +
Sbjct: 64 EREYLAAEIKKANVICLVY--SDNYSYERVSIFWLPYFRSLGVNVPIVLCENKSEDLDNY 121
Query: 456 RQVSKERGEQLAIXYXIKFVET----SAKDSLNVEYAFY 560
+ + E + + K +E SA + +NV FY
Sbjct: 122 QGLHTIEHEMIPLINEFKEIEACILCSALEKINVNELFY 160
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 29.1 bits (62), Expect = 0.59
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 99 KLLLIGDSGVGKTSIL-FXFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 275
K+LL+G SG GK+S+ FS + ID + + G V L +WD GQE
Sbjct: 4 KVLLMGRSGSGKSSMRSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLV-LNLWDCGGQE 62
Query: 276 RF 281
F
Sbjct: 63 AF 64
>SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase
Alg6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 506
Score = 26.2 bits (55), Expect = 4.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 111 IGDSGVGKTSILFXFSEDAFNISFISTIGIDFKI 212
IGD V ++LF F + +F + I +GID I
Sbjct: 423 IGDMVVFSKNVLFRFIQLSFYVGMIVILGIDLFI 456
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 26.2 bits (55), Expect = 4.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 323 NSHRTTVVCCCYCTESLLTSS 261
+SH+T++VC Y E LL S
Sbjct: 1331 DSHKTSIVCILYLLEVLLADS 1351
>SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 596
Score = 26.2 bits (55), Expect = 4.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 582 AKMEKKQEASNPSGGXSGVHKPT 650
A + +ASNP+G S H+PT
Sbjct: 546 ASLAHLSQASNPNGSSSAPHRPT 568
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 25.8 bits (54), Expect = 5.5
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +3
Query: 96 FKLLLIGDSGVGKTSILFXFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 275
F L+L G+SG+GKT+ F F+ + S +G + K+R + K V+++I +E
Sbjct: 29 FTLMLCGESGLGKTT----FCNTLFSTTIKSHMGPE-KVRAKHAE-KTVEIEITKAELEE 82
Query: 276 R 278
+
Sbjct: 83 K 83
>SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 752
Score = 25.8 bits (54), Expect = 5.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 163 SSENXNSIDVFPTPESPIRSNLNKQS 86
SSE +S+DV PTP + NL S
Sbjct: 617 SSEPTSSVDVAPTPVEDVNVNLESIS 642
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 25.8 bits (54), Expect = 5.5
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -2
Query: 604 SCFFSIFAFMSLXKV*NAYSTF-NESFADVSTNF 506
S FFS ++L + YS F N SF D T+F
Sbjct: 9 SLFFSFERLLTLANANSLYSPFNNSSFVDSDTSF 42
>SPAC27D7.08c |||DUF890 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 385
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -3
Query: 615 DYSLPVSFPFSLLCPWXKCK-MHIQHLTSLL 526
DYSL V FP + LCP + +I+++ LL
Sbjct: 35 DYSLRVEFPENRLCPMVPNRATYIRYIHDLL 65
>SPAC23A1.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 101
Score = 25.0 bits (52), Expect = 9.5
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3
Query: 54 NQIVVKMAKTYDCLFK 101
N +V+K K YDC+F+
Sbjct: 3 NPVVIKAKKDYDCVFE 18
>SPBC20F10.06 |mad2||spindle checkpoint protein
Mad2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 203
Score = 25.0 bits (52), Expect = 9.5
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 327 LVYDVTNXKSFENIKNWIRNIEXNASADVXKMILGNKCD-LXSQRQV 464
L+ +T+ S E+++ W N+E +AD + I GNK D L Q+++
Sbjct: 83 LILVITSKCSGEDLERWQFNVEMVDTADQFQNI-GNKEDELRVQKEI 128
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,496,422
Number of Sequences: 5004
Number of extensions: 47619
Number of successful extensions: 159
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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