Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_P03
         (653 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    27   0.21 
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   1.9  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   1.9  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   2.6  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    23   3.4  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   6.0  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   6.0  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   6.0  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   6.0  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   6.0  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -1

Query: 236  FAIKVYCSNFKVDTNCGYKGDVKCIFRK 153
            ++++  C NF  D+   + G   C+FRK
Sbjct: 1592 YSVRGLCGNFDHDSTNDFVGPKNCLFRK 1619


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -2

Query: 265 AVSHICNLTFLPSRSIVRILKSIP 194
           AVSHICN T      +V   K IP
Sbjct: 230 AVSHICNATNKQLFQLVAWAKHIP 253


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -2

Query: 265 AVSHICNLTFLPSRSIVRILKSIP 194
           AVSHICN T      +V   K IP
Sbjct: 230 AVSHICNATNKQLFQLVAWAKHIP 253


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 245 ITNMGYCWSREIPYNNNSI 301
           +T  GYC   E+PY+   I
Sbjct: 320 VTLKGYCIDMEVPYSGTLI 338


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/39 (20%), Positives = 18/39 (46%)
 Frame = +3

Query: 360 ENIKNWIRNIEXNASADVXKMILGNKCDLXSQRQVSKER 476
           E ++NW         A+  ++I G      + + ++KE+
Sbjct: 185 EKLRNWFSKNVNQTVAETVRIIYGGSVTAGNAKDLAKEK 223


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = +3

Query: 129 GKTSILFXFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 251
           G+  I++  S+D+F+    +T   D K   + +DG+    Q
Sbjct: 210 GEGLIVYHNSDDSFHRLTSNTFDYDPKFTKMTIDGESYTAQ 250


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -1

Query: 299 CCCYCTESL 273
           CCC+C ++L
Sbjct: 11  CCCWCCDNL 19


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 262 VSHICNLTFLPSRSI 218
           +  I NLTFLP RS+
Sbjct: 878 IGFIGNLTFLPLRSL 892


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = +3

Query: 129 GKTSILFXFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 251
           G+  I++  S+D+F+    +T   D K   + +DG+    Q
Sbjct: 210 GEGLIVYHNSDDSFHRLTSNTFDYDPKFTKMTIDGESYTAQ 250


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = +3

Query: 129 GKTSILFXFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 251
           G+  I++  S+D+F+    +T   D K   + +DG+    Q
Sbjct: 210 GEGLIVYHNSDDSFHRLTSNTFDYDPKFTKMTIDGESYTAQ 250


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,302
Number of Sequences: 438
Number of extensions: 3489
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)