Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_P02
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    27   0.18 
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   6.7  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   8.9  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 272 YTVQFVRNLCWL*LDCFVSVVLLV 343
           YT+ F+ N C    +CF S +LL+
Sbjct: 133 YTLSFIENYCQFLYNCFHSTLLLM 156


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
 Frame = +1

Query: 7   LLSVKLQNYXIECILFRKNTII*RKMEHFINYDSVT---AYYFVTGGLFLMYLAFRILY 174
           LL  KL    +   L     II +  E F  + + T    YYF++ GL ++ L     Y
Sbjct: 280 LLDEKLSYIILTSFLNNFYFIIFQVFESFYLHKATTLETVYYFISLGLLILRLVSVCFY 338


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -2

Query: 328 THKTIQLQPT*VSHKLYSIYYRGLTYYTEYFSKYDHK 218
           T  +I  +PT +  KLY +    +   TE +S Y+ +
Sbjct: 19  TPSSIYDKPTKLYQKLYPVLMFLIYTITEIYSVYERR 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,899
Number of Sequences: 336
Number of extensions: 3265
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)