BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P02_F_P02 (653 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 26 5.5 SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces po... 25 7.2 SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr ... 25 9.5 SPBC691.01 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 25 9.5 SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|c... 25 9.5 >SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosaccharomyces pombe|chr 1|||Manual Length = 988 Score = 25.8 bits (54), Expect = 5.5 Identities = 12/31 (38%), Positives = 14/31 (45%) Frame = +1 Query: 277 CTVCEKLMLAVVGLFCECCAVSACXKCYXTV 369 C VC +L GL CE C+ KC V Sbjct: 427 CAVCAELFSYSPGLQCENCSFVCHKKCVTKV 457 >SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces pombe|chr 3|||Manual Length = 1010 Score = 25.4 bits (53), Expect = 7.2 Identities = 7/23 (30%), Positives = 16/23 (69%) Frame = +1 Query: 118 YYFVTGGLFLMYLAFRILYSLIV 186 +YF+TGG+F++++ + I+ Sbjct: 7 FYFITGGIFILWILAHSFFVKII 29 >SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr 1|||Manual Length = 1854 Score = 25.0 bits (52), Expect = 9.5 Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Frame = +1 Query: 94 INYDSVTAYYFVTGGLFLMYLAFRILYSLIVQNNFMQTQYRAYGHTWRSIQCNKSI-PYN 270 I YD + A YFV+ LF++ F L+ + + + + + H+ ++ + KS+ + Sbjct: 446 IMYDIMDAEYFVSCLLFIISAYFLTLWLMSLVIAVVTSSFIDLQHSGKNQKEQKSVDKHL 505 Query: 271 IYCTVCEKLM 300 I +CEK + Sbjct: 506 IRNKLCEKYL 515 >SPBC691.01 |||palmitoyltransferase |Schizosaccharomyces pombe|chr 2|||Manual Length = 312 Score = 25.0 bits (52), Expect = 9.5 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = -2 Query: 592 YCYIYGSHIAQFSNP*YYYTTLFFGTS 512 YC G + FSN ++Y LF+G S Sbjct: 142 YCSFVGKDVC-FSNQKFFYQFLFYGFS 167 >SPAC2G11.09 |||DUF221 family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 796 Score = 25.0 bits (52), Expect = 9.5 Identities = 14/44 (31%), Positives = 21/44 (47%) Frame = -3 Query: 393 LFTFIXXIHCXVAFXACTNSTTLTKQSNYSQHKFLTNCTVYIIG 262 LFT+ I + T S +QS ++ LT+ TV+I G Sbjct: 202 LFTYFISIFLLYVLFSSTKSIADIRQSYLARQNRLTDRTVFISG 245 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,535,657 Number of Sequences: 5004 Number of extensions: 49864 Number of successful extensions: 119 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 109 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 119 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 295793106 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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