BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P02_F_P02 (653 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_02_0870 - 23852923-23853228,23853416-23853728,23853813-238539... 38 0.005 03_05_0559 - 25610474-25610951,25611149-25611890,25612355-256127... 33 0.26 03_02_0915 + 12360079-12360095,12360225-12361353 32 0.35 03_02_0905 - 12292322-12293073,12293288-12293471 29 2.4 02_03_0217 + 16512689-16512838,16514353-16515444 29 3.2 02_04_0561 + 23879976-23879981,23880531-23882558,23882687-238827... 28 5.6 >12_02_0870 - 23852923-23853228,23853416-23853728,23853813-23853938, 23854038-23854243,23854311-23854443,23854607-23854688, 23854785-23854914,23855034-23855126,23855211-23855333, 23855786-23855977,23858230-23858394,23858697-23858768, 23858826-23858945,23859873-23859949,23860032-23860398, 23860738-23861871 Length = 1212 Score = 38.3 bits (85), Expect = 0.005 Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 19/149 (12%) Frame = +1 Query: 217 AYGHTWRSIQCNKSIPYNIYCTVCEKLMLA---VVGLF--CECCAVSACXKCYXTVDXXY 381 A H WR ++S + C VC K + + + G+ C+ C +A C Sbjct: 72 ASSHIWRKELGSRS--KGLKCCVCLKSVSSPQYMGGVIHQCDICGATAHPSCSGNAHKDC 129 Query: 382 KCKQLTWPSNKIFPHQWVDVGISRTDIAENND---HXDDX--------TXKYFCSWCQRI 528 KC + + I HQW I +D +E + + D+ + ++C WCQR+ Sbjct: 130 KCVSMVGFEHVI--HQWAVQWIDTSDRSEEDSFCCYCDESCNGAFLAGSPIWYCMWCQRL 187 Query: 529 KL--CNNTXDLKT-EQCDFHKYSNIIIPP 606 C+N ++T + CD +I+ P Sbjct: 188 VHVDCHNNLSIETGDICDLGPLKRLILSP 216 >03_05_0559 - 25610474-25610951,25611149-25611890,25612355-25612744, 25613041-25613099,25613186-25613326,25613449-25613545, 25614999-25615185 Length = 697 Score = 32.7 bits (71), Expect = 0.26 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +1 Query: 238 SIQCNKSIPYNIYCTVCEKLMLAVVGLFCECCAVSACXKC 357 S+ +P ++C +C K+M V L +CC S C KC Sbjct: 254 SVSVVDDLPAELHCRLCNKVMADAV-LTSKCCFDSFCDKC 292 >03_02_0915 + 12360079-12360095,12360225-12361353 Length = 381 Score = 32.3 bits (70), Expect = 0.35 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +1 Query: 259 IPYNIYCTVCEKLMLAVVGLFCECCAVSACXKC 357 IP +YC +C +M V L +CC S C +C Sbjct: 168 IPAELYCKICRNVMANAV-LASKCCFDSFCDRC 199 >03_02_0905 - 12292322-12293073,12293288-12293471 Length = 311 Score = 29.5 bits (63), Expect = 2.4 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = +1 Query: 259 IPYNIYCTVCEKLMLAVVGLFCECCAVSACXKC 357 IP +YC +C +M V + +CC S C C Sbjct: 82 IPAELYCKICRNVMADAV-VTSKCCFDSFCDGC 113 >02_03_0217 + 16512689-16512838,16514353-16515444 Length = 413 Score = 29.1 bits (62), Expect = 3.2 Identities = 15/60 (25%), Positives = 28/60 (46%) Frame = +1 Query: 424 HQWVDVGISRTDIAENNDHXDDXTXKYFCSWCQRIKLCNNTXDLKTEQCDFHKYSNIIIP 603 H+ +D G+ D+ + ++C K+ NT ++K FHKY N+++P Sbjct: 102 HEAID-GVELPDVVAKSVQFGTTALDMTAAYCT--KIVQNTNNIKKHDI-FHKYCNVLLP 157 >02_04_0561 + 23879976-23879981,23880531-23882558,23882687-23882722, 23882826-23882939,23883158-23883226,23883311-23883445 Length = 795 Score = 28.3 bits (60), Expect = 5.6 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +2 Query: 44 VYFFVKIQ*FEGKWNTLLIMTALQLITLLRVVY 142 VY + I FEG WN L+ LQ LR +Y Sbjct: 350 VYDSLTIDEFEGNWNALITYNGLQGNDWLRSIY 382 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,497,048 Number of Sequences: 37544 Number of extensions: 251608 Number of successful extensions: 485 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 477 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 485 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1632177336 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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