Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_O24
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   2.9  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   2.9  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   5.0  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   5.0  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   5.0  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   6.7  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 405 ESFIXRYDVVLDEQWMNVLWSSVVSIF 485
           ESF   Y      Q+  VLW S++++F
Sbjct: 383 ESFKSPYKASCWAQFKAVLWRSILAVF 409


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 405 ESFIXRYDVVLDEQWMNVLWSSVVSIF 485
           ESF   Y      Q+  VLW S++++F
Sbjct: 383 ESFKSPYKASCWAQFKAVLWRSILAVF 409


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 524 VRAKYRAGTPADDEDRHHRR 465
           VRAK +  TPA++ D+   R
Sbjct: 317 VRAKTQNATPANNNDKRKSR 336


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 115 DPRLVTCVHL*LCYGGQSSWFYPALPKIGDENLFNMYHNRY 237
           DP L  C HL   Y G ++  + A P      LF++  + Y
Sbjct: 44  DPALQFCTHLIYGYAGINAETFKAQPL---NELFDVTRDNY 81


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 524 VRAKYRAGTPADDEDRHHRR 465
           VRAK +  TPA++ D+   R
Sbjct: 317 VRAKTQNATPANNNDKRKSR 336


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 285 GWSFYLILAGVITTIGSSV 341
           GW+  LILA  IT+  SS+
Sbjct: 225 GWTLILILAKCITSSLSSL 243


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,729
Number of Sequences: 336
Number of extensions: 3259
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)