BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P02_F_O24 (650 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual 27 2.3 SPAC23C11.11 |cka1|orb5|serine/threonine protein kinase Cka1|Sch... 26 4.1 SPAC13G6.06c |||glycine cleavage complex subunit P|Schizosacchar... 26 4.1 SPCC965.13 |||membrane transporter|Schizosaccharomyces pombe|chr... 26 4.1 SPBC13G1.03c |pex14||peroxisomal membrane anchor protein|Schizos... 25 9.5 >SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual Length = 1496 Score = 27.1 bits (57), Expect = 2.3 Identities = 11/51 (21%), Positives = 23/51 (45%) Frame = +3 Query: 342 PVXYNIGVVNTPAEVIKQFCNESFIXRYDVVLDEQWMNVLWSSVVSIFIVG 494 P+ +VN P K + N + +D +LD + + S+ +++ G Sbjct: 1332 PIPERAPLVNDPVNYSKNWWNVKILEHFDFILDTEAASTFPKSITAVYSWG 1382 >SPAC23C11.11 |cka1|orb5|serine/threonine protein kinase Cka1|Schizosaccharomyces pombe|chr 1|||Manual Length = 332 Score = 26.2 bits (55), Expect = 4.1 Identities = 16/64 (25%), Positives = 32/64 (50%) Frame = +3 Query: 270 EYTATGWSFYLILAGVITTIGSSVPVXYNIGVVNTPAEVIKQFCNESFIXRYDVVLDEQW 449 +Y+ WSF ++ A +I + N + A+V+ +++ +Y +VLD Q+ Sbjct: 214 DYSLDIWSFGVMFAALIFKKDTFFRGRDNYDQLVKIAKVLGTDELFAYVQKYQIVLDRQY 273 Query: 450 MNVL 461 N+L Sbjct: 274 DNIL 277 >SPAC13G6.06c |||glycine cleavage complex subunit P|Schizosaccharomyces pombe|chr 1|||Manual Length = 1017 Score = 26.2 bits (55), Expect = 4.1 Identities = 20/57 (35%), Positives = 26/57 (45%) Frame = +3 Query: 165 EQLVLPCLAENRRRESFQYVPQPVFNENXHWTXTNEYTATGWSFYLILAGVITTIGS 335 + L + L EN RR + Y+ PVFN T Y S L LA +T +GS Sbjct: 517 DNLSICSLPENFRRTTL-YLQHPVFNRYHSETELMRYIHHLQSKDLSLAHAMTPLGS 572 >SPCC965.13 |||membrane transporter|Schizosaccharomyces pombe|chr 3|||Manual Length = 537 Score = 26.2 bits (55), Expect = 4.1 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 1/76 (1%) Frame = +3 Query: 357 IGVVNTPAEVIKQFCNESFIXRYDVVLDEQWMNVLWSSVV-SIFIVGGCTGSILGSYLAD 533 + V T EV + + + I +D+ ++ S +V S+FIVG G +L ++D Sbjct: 91 VATVYTFLEVYVIWSSTACINFFDIYQTNWHCSIQVSYLVQSLFIVGNAFGPMLLGPMSD 150 Query: 534 SLGXKMATIATGALWI 581 G K + + L+I Sbjct: 151 IFGRKWVYVGSLILYI 166 >SPBC13G1.03c |pex14||peroxisomal membrane anchor protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 286 Score = 25.0 bits (52), Expect = 9.5 Identities = 11/41 (26%), Positives = 22/41 (53%) Frame = +3 Query: 204 RESFQYVPQPVFNENXHWTXTNEYTATGWSFYLILAGVITT 326 +E+F+ P+F + T+ + + W + I+ GVI+T Sbjct: 41 QEAFKLAKNPLFPSYPRFENTSNFVSRDWRDWFIM-GVIST 80 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,563,377 Number of Sequences: 5004 Number of extensions: 51677 Number of successful extensions: 130 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 125 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 130 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 293780908 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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