BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P02_F_O24 (650 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 09_04_0005 + 13612060-13612291,13612381-13612510,13612726-136129... 36 0.021 03_06_0498 - 34341441-34341575,34341808-34341945,34342019-343421... 36 0.028 01_01_0216 + 1843413-1843509,1844583-1844694,1844841-1844908,184... 33 0.26 10_08_1053 - 22575281-22575409,22575516-22575653,22575786-225758... 31 1.1 05_05_0059 + 22011168-22011662,22012668-22012894,22013029-220133... 30 1.4 09_06_0274 + 21967740-21968230,21968411-21968550,21968711-219689... 29 2.4 01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 29 2.4 01_06_0284 + 28174126-28174247,28174380-28174407,28174729-28174935 29 3.2 07_01_1118 - 10316298-10316710,10316789-10317264,10317397-103177... 29 4.2 04_04_0079 + 22586803-22586923,22592541-22592860,22592991-225936... 29 4.2 04_04_0087 + 22718930-22719068,22719165-22719484,22721406-22722500 28 5.6 12_02_0496 + 19704429-19704613,19705874-19706736,19706764-197069... 27 9.8 04_04_0593 - 26480036-26481438,26481915-26482083 27 9.8 02_05_0432 + 28936293-28936796,28937382-28939250 27 9.8 >09_04_0005 + 13612060-13612291,13612381-13612510,13612726-13612926, 13613086-13613185,13613513-13613559,13613871-13613964, 13614042-13614192,13614777-13614923,13614994-13615067, 13615288-13615376,13615840-13615954,13616104-13616301 Length = 525 Score = 36.3 bits (80), Expect = 0.021 Identities = 39/121 (32%), Positives = 52/121 (42%) Frame = +3 Query: 285 GWSFYLILAGVITTIGSSVPVXYNIGVVNTPAEVIKQFCNESFIXRYDVVLDEQWMNVLW 464 GW + V+T ++ Y+IGV+N P E I + L Q L Sbjct: 98 GW--LRVFPHVLTASMANFLFGYHIGVMNGPIEDIAR------------ELGFQGNPFLQ 143 Query: 465 SSVVSIFIVGGCTGSILGSYLADSLGXKMATIATGALWIAGALLFLLCRTANSXXMLIIG 644 VVSIFIVG GS+ S L D+ G K I GA LL A+S +++G Sbjct: 144 GLVVSIFIVGAFFGSLGSSALVDNFGCKRTLQIDSIPLILGA---LLSAQADSLDEMLLG 200 Query: 645 R 647 R Sbjct: 201 R 201 >03_06_0498 - 34341441-34341575,34341808-34341945,34342019-34342117, 34342320-34342400,34342548-34342610,34342717-34342764, 34343033-34343410,34345413-34345537,34345635-34345701, 34345797-34345856,34346495-34346621,34346670-34346986 Length = 545 Score = 35.9 bits (79), Expect = 0.028 Identities = 23/60 (38%), Positives = 33/60 (55%) Frame = +3 Query: 471 VVSIFIVGGCTGSILGSYLADSLGXKMATIATGALWIAGALLFLLCRTANSXXMLIIGRL 650 V S + G GS+L +AD LG ++ + AL+I+GA L+ A +LIIGRL Sbjct: 168 VASGSLYGALGGSLLAYRVADFLGRRIELVTAAALYISGA---LVTGFAPDFVLLIIGRL 224 >01_01_0216 + 1843413-1843509,1844583-1844694,1844841-1844908, 1845165-1845297,1845404-1845503,1845562-1845722, 1846095-1846188,1846273-1846426,1846597-1846743, 1846819-1846892,1846985-1847073,1847161-1847275, 1847569-1847751 Length = 508 Score = 32.7 bits (71), Expect = 0.26 Identities = 24/65 (36%), Positives = 27/65 (41%) Frame = +3 Query: 456 VLWSSVVSIFIVGGCTGSILGSYLADSLGXKMATIATGALWIAGALLFLLCRTANSXXML 635 VL VVS + G GS G LAD G I GA L TA+ + Sbjct: 90 VLQGWVVSTTLAGATAGSFTGGALADKFGRTRTFILDAIPLAVGA---FLSATAHDVRTM 146 Query: 636 IIGRL 650 IIGRL Sbjct: 147 IIGRL 151 >10_08_1053 - 22575281-22575409,22575516-22575653,22575786-22575884, 22576281-22576361,22577171-22577233,22577473-22577520, 22577622-22577990,22578082-22578183,22578290-22578414, 22578500-22578566,22578817-22578895,22578928-22579079, 22579182-22579223 Length = 497 Score = 30.7 bits (66), Expect = 1.1 Identities = 19/58 (32%), Positives = 30/58 (51%) Frame = +3 Query: 474 VSIFIVGGCTGSILGSYLADSLGXKMATIATGALWIAGALLFLLCRTANSXXMLIIGR 647 VS + G GSIL +AD LG + I + ++ GA LL A + ++++GR Sbjct: 92 VSGSLYGALIGSILAFNIADFLGRRRELILSSVSYLIGA---LLTAAAPNFPIMVVGR 146 >05_05_0059 + 22011168-22011662,22012668-22012894,22013029-22013377, 22013464-22013508,22013589-22013735,22013851-22013988, 22014126-22014159,22014258-22014430 Length = 535 Score = 30.3 bits (65), Expect = 1.4 Identities = 19/68 (27%), Positives = 27/68 (39%) Frame = +3 Query: 447 WMNVLWSSVVSIFIVGGCTGSILGSYLADSLGXKMATIATGALWIAGALLFLLCRTANSX 626 W + V S F+ G S++G LAD G K ALW L + ++ Sbjct: 156 WSSSFLGIVQSSFLWGYVFSSMVGGALADRYGGKKVMAGAAALWSLATFLTPWAASQSTI 215 Query: 627 XMLIIGRL 650 +L I L Sbjct: 216 MLLAIRAL 223 >09_06_0274 + 21967740-21968230,21968411-21968550,21968711-21968905, 21969524-21969652,21970063-21970218,21970507-21970589, 21972229-21972433,21972601-21972805,21973059-21973194, 21973990-21974164,21974470-21974528,21974642-21974716, 21974804-21974920,21975010-21975080,21975170-21975473, 21975721-21976086,21976404-21976514 Length = 1005 Score = 29.5 bits (63), Expect = 2.4 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = -2 Query: 421 RXMKLSLQNCFITSAGVLTTPILYXTGT 338 R + L L+ CF TS TP LY +GT Sbjct: 3 RRLLLPLRRCFSTSTSSSATPTLYSSGT 30 >01_03_0117 + 12684729-12685886,12685978-12686145,12686292-12686336, 12686438-12687280 Length = 737 Score = 29.5 bits (63), Expect = 2.4 Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Frame = -2 Query: 643 PIISXSXELAVRHSKKSKAPAIHNA--PVAIVAIFXPRLSAKYEPSIEPVHPP 491 P+ S S E RHS SK PA A P A+ P K PS+ PV PP Sbjct: 201 PVPSPSPEHPPRHSP-SKPPAYAPAKPPTALRPAIPPAAMPK-PPSVAPVQPP 251 >01_06_0284 + 28174126-28174247,28174380-28174407,28174729-28174935 Length = 118 Score = 29.1 bits (62), Expect = 3.2 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = +3 Query: 498 CTGSILGSYLADSLGXKMATIATGALWIAGA 590 CT ++G LA S+G A A G LWI G+ Sbjct: 82 CTRFLVGFVLAVSVGFLSAVKALGMLWILGS 112 >07_01_1118 - 10316298-10316710,10316789-10317264,10317397-10317735, 10317798-10317895,10319007-10319045 Length = 454 Score = 28.7 bits (61), Expect = 4.2 Identities = 10/34 (29%), Positives = 19/34 (55%) Frame = +3 Query: 414 IXRYDVVLDEQWMNVLWSSVVSIFIVGGCTGSIL 515 + RY +V+D W W +++S + C+G I+ Sbjct: 44 LQRYLIVIDNVWSISAWEAILSRLLDNKCSGRII 77 >04_04_0079 + 22586803-22586923,22592541-22592860,22592991-22593623, 22593717-22594166 Length = 507 Score = 28.7 bits (61), Expect = 4.2 Identities = 18/66 (27%), Positives = 33/66 (50%) Frame = +3 Query: 453 NVLWSSVVSIFIVGGCTGSILGSYLADSLGXKMATIATGALWIAGALLFLLCRTANSXXM 632 N + ++ S + G S++ S + +G + + GAL++AG+ A + M Sbjct: 74 NQVLTAFTSSLYIAGAVASLVASRVTRMVGRQAIMLTGGALFLAGS---AFNAGAVNIAM 130 Query: 633 LIIGRL 650 LIIGR+ Sbjct: 131 LIIGRI 136 >04_04_0087 + 22718930-22719068,22719165-22719484,22721406-22722500 Length = 517 Score = 28.3 bits (60), Expect = 5.6 Identities = 19/66 (28%), Positives = 35/66 (53%) Frame = +3 Query: 453 NVLWSSVVSIFIVGGCTGSILGSYLADSLGXKMATIATGALWIAGALLFLLCRTANSXXM 632 +VL + S+++ G S+ + ++G + +A GAL+ AGA + A + M Sbjct: 81 HVLTAFTSSLYLAG-LAASLAAGRVTRAVGRQAVMLAGGALFFAGA---AVNAAAVNIAM 136 Query: 633 LIIGRL 650 LI+GR+ Sbjct: 137 LIVGRM 142 >12_02_0496 + 19704429-19704613,19705874-19706736,19706764-19706951, 19707190-19708200 Length = 748 Score = 27.5 bits (58), Expect = 9.8 Identities = 13/50 (26%), Positives = 21/50 (42%) Frame = +3 Query: 336 SVPVXYNIGVVNTPAEVIKQFCNESFIXRYDVVLDEQWMNVLWSSVVSIF 485 S+ + N+ + AE+ RY +VLD+ W W +V F Sbjct: 171 SIQIGANLDLSRDVAEIKHHMFTFLLDKRYLIVLDDVWREETWHELVDAF 220 >04_04_0593 - 26480036-26481438,26481915-26482083 Length = 523 Score = 27.5 bits (58), Expect = 9.8 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = +3 Query: 471 VVSIFIVGGCTGSILGSYLADSLGXKMATIATGAL-WIAGALLFLLCRTANSXXMLIIGR 647 +V V GS+ G +D++G K T+A GA+ + AGA + A S +L+IGR Sbjct: 82 LVGCLSVVSLLGSLSGGRTSDAIGRKW-TMALGAIVFQAGAAIMTF---APSFTVLMIGR 137 Query: 648 L 650 L Sbjct: 138 L 138 >02_05_0432 + 28936293-28936796,28937382-28939250 Length = 790 Score = 27.5 bits (58), Expect = 9.8 Identities = 16/55 (29%), Positives = 23/55 (41%) Frame = -2 Query: 385 TSAGVLTTPILYXTGTDDPMVVMTPANIK*NDHPVAVYSFVLVQXWFSLNTGCGT 221 T +L + T D V + I+ ND VYS+++ Q WF N T Sbjct: 133 TFTRILNAQRKWITQDDATYVAVHCLRIRNNDAAFRVYSWMVRQHWFRFNFALAT 187 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,075,296 Number of Sequences: 37544 Number of extensions: 345521 Number of successful extensions: 855 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 841 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 855 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1620349964 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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