Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_O24
(650 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0005 + 13612060-13612291,13612381-13612510,13612726-136129... 36 0.021
03_06_0498 - 34341441-34341575,34341808-34341945,34342019-343421... 36 0.028
01_01_0216 + 1843413-1843509,1844583-1844694,1844841-1844908,184... 33 0.26
10_08_1053 - 22575281-22575409,22575516-22575653,22575786-225758... 31 1.1
05_05_0059 + 22011168-22011662,22012668-22012894,22013029-220133... 30 1.4
09_06_0274 + 21967740-21968230,21968411-21968550,21968711-219689... 29 2.4
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 29 2.4
01_06_0284 + 28174126-28174247,28174380-28174407,28174729-28174935 29 3.2
07_01_1118 - 10316298-10316710,10316789-10317264,10317397-103177... 29 4.2
04_04_0079 + 22586803-22586923,22592541-22592860,22592991-225936... 29 4.2
04_04_0087 + 22718930-22719068,22719165-22719484,22721406-22722500 28 5.6
12_02_0496 + 19704429-19704613,19705874-19706736,19706764-197069... 27 9.8
04_04_0593 - 26480036-26481438,26481915-26482083 27 9.8
02_05_0432 + 28936293-28936796,28937382-28939250 27 9.8
>09_04_0005 +
13612060-13612291,13612381-13612510,13612726-13612926,
13613086-13613185,13613513-13613559,13613871-13613964,
13614042-13614192,13614777-13614923,13614994-13615067,
13615288-13615376,13615840-13615954,13616104-13616301
Length = 525
Score = 36.3 bits (80), Expect = 0.021
Identities = 39/121 (32%), Positives = 52/121 (42%)
Frame = +3
Query: 285 GWSFYLILAGVITTIGSSVPVXYNIGVVNTPAEVIKQFCNESFIXRYDVVLDEQWMNVLW 464
GW + V+T ++ Y+IGV+N P E I + L Q L
Sbjct: 98 GW--LRVFPHVLTASMANFLFGYHIGVMNGPIEDIAR------------ELGFQGNPFLQ 143
Query: 465 SSVVSIFIVGGCTGSILGSYLADSLGXKMATIATGALWIAGALLFLLCRTANSXXMLIIG 644
VVSIFIVG GS+ S L D+ G K I GA LL A+S +++G
Sbjct: 144 GLVVSIFIVGAFFGSLGSSALVDNFGCKRTLQIDSIPLILGA---LLSAQADSLDEMLLG 200
Query: 645 R 647
R
Sbjct: 201 R 201
>03_06_0498 -
34341441-34341575,34341808-34341945,34342019-34342117,
34342320-34342400,34342548-34342610,34342717-34342764,
34343033-34343410,34345413-34345537,34345635-34345701,
34345797-34345856,34346495-34346621,34346670-34346986
Length = 545
Score = 35.9 bits (79), Expect = 0.028
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +3
Query: 471 VVSIFIVGGCTGSILGSYLADSLGXKMATIATGALWIAGALLFLLCRTANSXXMLIIGRL 650
V S + G GS+L +AD LG ++ + AL+I+GA L+ A +LIIGRL
Sbjct: 168 VASGSLYGALGGSLLAYRVADFLGRRIELVTAAALYISGA---LVTGFAPDFVLLIIGRL 224
>01_01_0216 +
1843413-1843509,1844583-1844694,1844841-1844908,
1845165-1845297,1845404-1845503,1845562-1845722,
1846095-1846188,1846273-1846426,1846597-1846743,
1846819-1846892,1846985-1847073,1847161-1847275,
1847569-1847751
Length = 508
Score = 32.7 bits (71), Expect = 0.26
Identities = 24/65 (36%), Positives = 27/65 (41%)
Frame = +3
Query: 456 VLWSSVVSIFIVGGCTGSILGSYLADSLGXKMATIATGALWIAGALLFLLCRTANSXXML 635
VL VVS + G GS G LAD G I GA L TA+ +
Sbjct: 90 VLQGWVVSTTLAGATAGSFTGGALADKFGRTRTFILDAIPLAVGA---FLSATAHDVRTM 146
Query: 636 IIGRL 650
IIGRL
Sbjct: 147 IIGRL 151
>10_08_1053 -
22575281-22575409,22575516-22575653,22575786-22575884,
22576281-22576361,22577171-22577233,22577473-22577520,
22577622-22577990,22578082-22578183,22578290-22578414,
22578500-22578566,22578817-22578895,22578928-22579079,
22579182-22579223
Length = 497
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +3
Query: 474 VSIFIVGGCTGSILGSYLADSLGXKMATIATGALWIAGALLFLLCRTANSXXMLIIGR 647
VS + G GSIL +AD LG + I + ++ GA LL A + ++++GR
Sbjct: 92 VSGSLYGALIGSILAFNIADFLGRRRELILSSVSYLIGA---LLTAAAPNFPIMVVGR 146
>05_05_0059 +
22011168-22011662,22012668-22012894,22013029-22013377,
22013464-22013508,22013589-22013735,22013851-22013988,
22014126-22014159,22014258-22014430
Length = 535
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/68 (27%), Positives = 27/68 (39%)
Frame = +3
Query: 447 WMNVLWSSVVSIFIVGGCTGSILGSYLADSLGXKMATIATGALWIAGALLFLLCRTANSX 626
W + V S F+ G S++G LAD G K ALW L + ++
Sbjct: 156 WSSSFLGIVQSSFLWGYVFSSMVGGALADRYGGKKVMAGAAALWSLATFLTPWAASQSTI 215
Query: 627 XMLIIGRL 650
+L I L
Sbjct: 216 MLLAIRAL 223
>09_06_0274 +
21967740-21968230,21968411-21968550,21968711-21968905,
21969524-21969652,21970063-21970218,21970507-21970589,
21972229-21972433,21972601-21972805,21973059-21973194,
21973990-21974164,21974470-21974528,21974642-21974716,
21974804-21974920,21975010-21975080,21975170-21975473,
21975721-21976086,21976404-21976514
Length = 1005
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 421 RXMKLSLQNCFITSAGVLTTPILYXTGT 338
R + L L+ CF TS TP LY +GT
Sbjct: 3 RRLLLPLRRCFSTSTSSSATPTLYSSGT 30
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -2
Query: 643 PIISXSXELAVRHSKKSKAPAIHNA--PVAIVAIFXPRLSAKYEPSIEPVHPP 491
P+ S S E RHS SK PA A P A+ P K PS+ PV PP
Sbjct: 201 PVPSPSPEHPPRHSP-SKPPAYAPAKPPTALRPAIPPAAMPK-PPSVAPVQPP 251
>01_06_0284 + 28174126-28174247,28174380-28174407,28174729-28174935
Length = 118
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 498 CTGSILGSYLADSLGXKMATIATGALWIAGA 590
CT ++G LA S+G A A G LWI G+
Sbjct: 82 CTRFLVGFVLAVSVGFLSAVKALGMLWILGS 112
>07_01_1118 -
10316298-10316710,10316789-10317264,10317397-10317735,
10317798-10317895,10319007-10319045
Length = 454
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +3
Query: 414 IXRYDVVLDEQWMNVLWSSVVSIFIVGGCTGSIL 515
+ RY +V+D W W +++S + C+G I+
Sbjct: 44 LQRYLIVIDNVWSISAWEAILSRLLDNKCSGRII 77
>04_04_0079 +
22586803-22586923,22592541-22592860,22592991-22593623,
22593717-22594166
Length = 507
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +3
Query: 453 NVLWSSVVSIFIVGGCTGSILGSYLADSLGXKMATIATGALWIAGALLFLLCRTANSXXM 632
N + ++ S + G S++ S + +G + + GAL++AG+ A + M
Sbjct: 74 NQVLTAFTSSLYIAGAVASLVASRVTRMVGRQAIMLTGGALFLAGS---AFNAGAVNIAM 130
Query: 633 LIIGRL 650
LIIGR+
Sbjct: 131 LIIGRI 136
>04_04_0087 + 22718930-22719068,22719165-22719484,22721406-22722500
Length = 517
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = +3
Query: 453 NVLWSSVVSIFIVGGCTGSILGSYLADSLGXKMATIATGALWIAGALLFLLCRTANSXXM 632
+VL + S+++ G S+ + ++G + +A GAL+ AGA + A + M
Sbjct: 81 HVLTAFTSSLYLAG-LAASLAAGRVTRAVGRQAVMLAGGALFFAGA---AVNAAAVNIAM 136
Query: 633 LIIGRL 650
LI+GR+
Sbjct: 137 LIVGRM 142
>12_02_0496 +
19704429-19704613,19705874-19706736,19706764-19706951,
19707190-19708200
Length = 748
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/50 (26%), Positives = 21/50 (42%)
Frame = +3
Query: 336 SVPVXYNIGVVNTPAEVIKQFCNESFIXRYDVVLDEQWMNVLWSSVVSIF 485
S+ + N+ + AE+ RY +VLD+ W W +V F
Sbjct: 171 SIQIGANLDLSRDVAEIKHHMFTFLLDKRYLIVLDDVWREETWHELVDAF 220
>04_04_0593 - 26480036-26481438,26481915-26482083
Length = 523
Score = 27.5 bits (58), Expect = 9.8
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 471 VVSIFIVGGCTGSILGSYLADSLGXKMATIATGAL-WIAGALLFLLCRTANSXXMLIIGR 647
+V V GS+ G +D++G K T+A GA+ + AGA + A S +L+IGR
Sbjct: 82 LVGCLSVVSLLGSLSGGRTSDAIGRKW-TMALGAIVFQAGAAIMTF---APSFTVLMIGR 137
Query: 648 L 650
L
Sbjct: 138 L 138
>02_05_0432 + 28936293-28936796,28937382-28939250
Length = 790
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = -2
Query: 385 TSAGVLTTPILYXTGTDDPMVVMTPANIK*NDHPVAVYSFVLVQXWFSLNTGCGT 221
T +L + T D V + I+ ND VYS+++ Q WF N T
Sbjct: 133 TFTRILNAQRKWITQDDATYVAVHCLRIRNNDAAFRVYSWMVRQHWFRFNFALAT 187
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,075,296
Number of Sequences: 37544
Number of extensions: 345521
Number of successful extensions: 855
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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