BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P02_F_O24 (650 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_16059| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05 SB_759| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.029 SB_8709| Best HMM Match : Sugar_tr (HMM E-Value=0) 36 0.038 SB_7879| Best HMM Match : Sugar_tr (HMM E-Value=0.03) 34 0.087 SB_14968| Best HMM Match : IL3 (HMM E-Value=8.6) 29 3.3 SB_22968| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3 SB_38759| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3 SB_225| Best HMM Match : DSPc (HMM E-Value=8.6e-05) 28 5.7 >SB_16059| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 225 Score = 46.0 bits (104), Expect = 3e-05 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 2/87 (2%) Frame = +3 Query: 288 WSFYLILAGVITTIGSSVPVXYNIGVVNTPAEVIKQFCNESF--IXRYDVVLDEQWMNVL 461 W+ +LI A + +GSS YN +N+P E IK++ + YD Sbjct: 20 WTGWLIYATAVAVLGSSFQFGYNSACINSPVEDIKKYFKTQHKPLATYD----------- 68 Query: 462 WSSVVSIFIVGGCTGSILGSYLADSLG 542 WS +V IF GG G+++G L++ +G Sbjct: 69 WSIIVGIFPFGGMLGALVGPTLSNIIG 95 >SB_759| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1352 Score = 35.9 bits (79), Expect = 0.029 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Frame = -2 Query: 616 AVRHSKKSKAPAIHNAPV-AIVAIFXPRLSAKYEPSIEPVHPPTMKIDTTEDQRTFIHCS 440 +VRH KKS+ A V A+V + + ++K +E +HP + +D E + I CS Sbjct: 934 SVRHRKKSEVIADDEKQVGAVVLVTESKETSKQTRCLESLHPRLL-VDGAETKVNLIKCS 992 Query: 439 SSTTS 425 SS++S Sbjct: 993 SSSSS 997 >SB_8709| Best HMM Match : Sugar_tr (HMM E-Value=0) Length = 493 Score = 35.5 bits (78), Expect = 0.038 Identities = 22/72 (30%), Positives = 37/72 (51%) Frame = +3 Query: 435 LDEQWMNVLWSSVVSIFIVGGCTGSILGSYLADSLGXKMATIATGALWIAGALLFLLCRT 614 L + W ++ S + IVG ++LG L DSLG K + ++ AGA++ Sbjct: 84 LSDFWHELIVSGTIGTAIVG----AVLGGILNDSLGRKPVLVLCSGVFTAGAVVM---GV 136 Query: 615 ANSXXMLIIGRL 650 A + +L++GRL Sbjct: 137 AGTKHVLLVGRL 148 >SB_7879| Best HMM Match : Sugar_tr (HMM E-Value=0.03) Length = 201 Score = 34.3 bits (75), Expect = 0.087 Identities = 17/48 (35%), Positives = 25/48 (52%) Frame = +3 Query: 504 GSILGSYLADSLGXKMATIATGALWIAGALLFLLCRTANSXXMLIIGR 647 G++ G A+ G K + +A L I GALL L A + +L +GR Sbjct: 3 GALAGPLFANRFGRKRSLLANNGLAIVGALLMFLSYFAKTSPLLTVGR 50 >SB_14968| Best HMM Match : IL3 (HMM E-Value=8.6) Length = 321 Score = 29.1 bits (62), Expect = 3.3 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = -1 Query: 116 SEI-WLGLECRSRAYRCLQVKINRNFTPCLSFN 21 SE+ W+G C +R C +V+I R PC+ +N Sbjct: 26 SEVRWIG-HCSTRPIFCSRVRIRRQKCPCMYYN 57 >SB_22968| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1332 Score = 29.1 bits (62), Expect = 3.3 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = -1 Query: 116 SEI-WLGLECRSRAYRCLQVKINRNFTPCLSFN 21 SE+ W+G C +R C +V+I R PC+ +N Sbjct: 26 SEVRWIG-HCSTRPIFCSRVRIRRQKCPCMYYN 57 >SB_38759| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 468 Score = 28.7 bits (61), Expect = 4.3 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = +3 Query: 486 IVGGCTGSILGSYLADSLG 542 IVGGC GS+LG + +LG Sbjct: 319 IVGGCVGSLLGHVIGTTLG 337 >SB_225| Best HMM Match : DSPc (HMM E-Value=8.6e-05) Length = 881 Score = 28.3 bits (60), Expect = 5.7 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Frame = +3 Query: 432 VLDEQWMNVLWSSVVSIFIVGGCTGSILGSYLADSLGXKM-ATIATGALWIAGALLFLLC 608 V +E + +S+V I VG G LG ++ADSLG + A G+ I +L+ Sbjct: 378 VREEAYPKATGASLV-IMSVGVAGGPPLGGFIADSLGSYIPAFYVAGSFNILASLVLFFA 436 Query: 609 RTANS 623 T+ S Sbjct: 437 ITSRS 441 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,715,998 Number of Sequences: 59808 Number of extensions: 390321 Number of successful extensions: 968 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 886 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 968 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1657237625 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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