Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_O24
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical ... 65 4e-11
AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical ... 65 4e-11
U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical pr... 61 8e-10
AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical ... 58 7e-09
Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z83113-3|CAB05545.1| 479|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical ... 55 4e-08
AC024843-10|AAF60845.2| 526|Caenorhabditis elegans Hypothetical... 50 1e-06
Z70683-6|CAA94591.2| 512|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U28735-4|AAF99953.1| 488|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z99270-1|CAB16470.4| 500|Caenorhabditis elegans Hypothetical pr... 37 0.014
AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical ... 33 0.18
U80842-5|AAK71419.2| 305|Caenorhabditis elegans Serpentine rece... 32 0.41
U23453-2|AAV58891.1| 464|Caenorhabditis elegans Hypothetical pr... 32 0.41
U23453-1|AAP86622.1| 484|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z93388-5|CAB60295.1| 387|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z93388-4|CAB07662.1| 456|Caenorhabditis elegans Hypothetical pr... 31 0.94
Z72508-9|CAA96639.2| 410|Caenorhabditis elegans Hypothetical pr... 29 2.2
U28737-2|AAA68272.1| 455|Caenorhabditis elegans Patterned expre... 29 2.9
AF125952-2|AAD14700.1| 478|Caenorhabditis elegans Hypothetical ... 29 3.8
AC006722-8|AAK68418.2| 478|Caenorhabditis elegans Hypothetical ... 29 3.8
Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical pr... 28 6.6
AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical ... 28 6.6
AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical ... 28 6.6
AF016676-1|AAG24103.1| 598|Caenorhabditis elegans Hypothetical ... 28 6.6
AF101316-2|AAC69230.1| 692|Caenorhabditis elegans Hypothetical ... 27 8.7
>AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical
protein H17B01.1b protein.
Length = 510
Score = 65.3 bits (152), Expect = 4e-11
Identities = 37/117 (31%), Positives = 60/117 (51%)
Frame = +3
Query: 300 LILAGVITTIGSSVPVXYNIGVVNTPAEVIKQFCNESFIXRYDVVLDEQWMNVLWSSVVS 479
L + + T+ +S Y+IG VN P +I ++ S +D L + ++ WS VS
Sbjct: 46 LAFSAFVITL-ASFQFGYHIGCVNAPGGLITEWIIGSHKDLFDKELSRENADLAWSVAVS 104
Query: 480 IFIVGGCTGSILGSYLADSLGXKMATIATGALWIAGALLFLLCRTANSXXMLIIGRL 650
+F VGG G + +LAD +G + A L +A A L L ++ + M+I+GRL
Sbjct: 105 VFAVGGMIGGLSSGWLADKVGRRGALFYNNLLALAAAALMGLAKSVGAYPMVILGRL 161
>AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical
protein H17B01.1a protein.
Length = 492
Score = 65.3 bits (152), Expect = 4e-11
Identities = 37/117 (31%), Positives = 60/117 (51%)
Frame = +3
Query: 300 LILAGVITTIGSSVPVXYNIGVVNTPAEVIKQFCNESFIXRYDVVLDEQWMNVLWSSVVS 479
L + + T+ +S Y+IG VN P +I ++ S +D L + ++ WS VS
Sbjct: 28 LAFSAFVITL-ASFQFGYHIGCVNAPGGLITEWIIGSHKDLFDKELSRENADLAWSVAVS 86
Query: 480 IFIVGGCTGSILGSYLADSLGXKMATIATGALWIAGALLFLLCRTANSXXMLIIGRL 650
+F VGG G + +LAD +G + A L +A A L L ++ + M+I+GRL
Sbjct: 87 VFAVGGMIGGLSSGWLADKVGRRGALFYNNLLALAAAALMGLAKSVGAYPMVILGRL 143
>U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical
protein F53H8.3 protein.
Length = 569
Score = 60.9 bits (141), Expect = 8e-10
Identities = 38/119 (31%), Positives = 56/119 (47%)
Frame = +3
Query: 291 SFYLILAGVITTIGSSVPVXYNIGVVNTPAEVIKQFCNESFIXRYDVVLDEQWMNVLWSS 470
S YLI + GS+ Y+ GVVN VI + N+++I RY L NV+WS
Sbjct: 4 SRYLITVTTVVLGGSAQ--FYSYGVVNPAQVVITDWINQTYIDRYKAPLSLTVSNVIWSF 61
Query: 471 VVSIFIVGGCTGSILGSYLADSLGXKMATIATGALWIAGALLFLLCRTANSXXMLIIGR 647
VVS +G G+ + + G + G L + AL L+ + +S +LI GR
Sbjct: 62 VVSSIAIGAILGASFTRIIGEKYGRRNGMFFNGILNVFAALFELVAKRFSSPELLIFGR 120
>AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical
protein R09B5.11 protein.
Length = 516
Score = 57.6 bits (133), Expect = 7e-09
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
Frame = +3
Query: 243 ENXHWTXTNEYTATGWSFYLILAGVITTIG-SSVPVXYNIGVVNTPAEVIKQFCNESFIX 419
EN H + +E W+ +L I++I +S + IG +N P +I + +
Sbjct: 32 ENHHQSLPDE----NWTPFLFFC--ISSIALASFQDGFQIGCINAPGPLIIDWIKKCHFE 85
Query: 420 RYDVVLDEQWMNVLWSSVVSIFIVGGCTGSILGSYLADSLGXKMATIATGALWIAGALLF 599
+ VL + + +WS VS+F VGG GS +LAD G K + L + A+
Sbjct: 86 LFGEVLSQYQADFIWSVAVSMFSVGGMFGSFCSGFLADKFGRKSTLLYNNILALLAAVCL 145
Query: 600 LLCRTANSXXMLIIGR 647
+ N M++ GR
Sbjct: 146 STSKLFNFYPMIVFGR 161
>Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical
protein K08F9.1 protein.
Length = 490
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/86 (29%), Positives = 46/86 (53%)
Frame = +3
Query: 291 SFYLILAGVITTIGSSVPVXYNIGVVNTPAEVIKQFCNESFIXRYDVVLDEQWMNVLWSS 470
SF +++ VIT++ S YN+ + N + F N++F R+D L + + +WS
Sbjct: 6 SFRMLIVAVITSMAGSFHYGYNLVLTNPSQDAFLSFMNQTFAKRFDGGLSDHTLQNIWSF 65
Query: 471 VVSIFIVGGCTGSILGSYLADSLGXK 548
VV++ +G GS ++A+ +G K
Sbjct: 66 VVAVLFLGALAGSFSIPFIAEGVGRK 91
>Z83113-3|CAB05545.1| 479|Caenorhabditis elegans Hypothetical
protein K08H10.6 protein.
Length = 479
Score = 55.6 bits (128), Expect = 3e-08
Identities = 28/117 (23%), Positives = 54/117 (46%)
Frame = +3
Query: 300 LILAGVITTIGSSVPVXYNIGVVNTPAEVIKQFCNESFIXRYDVVLDEQWMNVLWSSVVS 479
L+ V+ T Y I VN +E+++QF ++ RY L ++++WSS+
Sbjct: 20 LLATSVVATFAGGFHFGYLISAVNPLSEILQQFIVDNLQNRYSYELSSSQLSLIWSSLAG 79
Query: 480 IFIVGGCTGSILGSYLADSLGXKMATIATGALWIAGALLFLLCRTANSXXMLIIGRL 650
+G G+ + +L S+G + + + L + A +F L + +L I R+
Sbjct: 80 CLFIGAMIGAYISIFLLQSIGPRNSLLLAAILQLFSAPVFGLAYSLRLCELLPISRI 136
>AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical
protein C35A11.4 protein.
Length = 515
Score = 55.2 bits (127), Expect = 4e-08
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Frame = +3
Query: 291 SFYLILAGVITTIGSSVPVXYNIGVVNTPAEVIKQFCNESFIXRYDVVLDEQWMNVLWSS 470
SF +I VIT+I S +N+ + N E F N++ R+D L + + +WS
Sbjct: 6 SFRMICVAVITSIAGSFHFGFNLVLTNPSQEAFLNFMNQTLAKRFDGGLSDNTLQNIWSF 65
Query: 471 VVSIFIVGGCTGSILGSYLADSLGXK---MATIATGAL 575
VV+I +G GS +AD +G K +IA G L
Sbjct: 66 VVAILFLGALAGSFSIRLIADWIGRKNGLYISIAVGVL 103
>AC024843-10|AAF60845.2| 526|Caenorhabditis elegans Hypothetical
protein Y61A9LA.1 protein.
Length = 526
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Frame = +3
Query: 291 SFYLILAGVITTIGSSVPVXYNIGVVNTPAEVIKQFCNESFIXRYDVVLDEQWMNVLWSS 470
S + + + + S Y V+N P I+QF N S+I R + + +++LWS
Sbjct: 35 SLSIHILSIALCLSSGFQQGYIASVLNQPYAQIEQFINSSWIERTGHPISDSTLHLLWSL 94
Query: 471 VVSIFIVGGCTGSILGSYLADSLGXKMATIATGALWIAGALLFLLCRTA-NSXXMLIIGR 647
+ F + G L ++ G K + L+I GALL + + +L +GR
Sbjct: 95 LNVCFPIATIFGQFLAGWMCSQFGRKHTALIASFLYIPGALLCAAAKWCFPAFELLFVGR 154
Query: 648 L 650
+
Sbjct: 155 I 155
>Z70683-6|CAA94591.2| 512|Caenorhabditis elegans Hypothetical
protein F13B12.2 protein.
Length = 512
Score = 46.8 bits (106), Expect = 1e-05
Identities = 37/143 (25%), Positives = 64/143 (44%)
Frame = +3
Query: 222 VPQPVFNENXHWTXTNEYTATGWSFYLILAGVITTIGSSVPVXYNIGVVNTPAEVIKQFC 401
VP +F +N + N G ++ L IT + S +PV Y I ++N P +V + F
Sbjct: 8 VPNAIFGQNS-FMIRNVIEDQGKVVFICL---ITILLSILPVGYYIVLLNVPEKVFQAFI 63
Query: 402 NESFIXRYDVVLDEQWMNVLWSSVVSIFIVGGCTGSILGSYLADSLGXKMATIATGALWI 581
+ F + + L + +++WS VS VG G ++ S ++ + + I
Sbjct: 64 FDHFENIFGLQLSKTEESLVWSLTVSSQGVGALIGCLIVSPISKFGAKDVLMRLNNVILI 123
Query: 582 AGALLFLLCRTANSXXMLIIGRL 650
AG+LL L I+GR+
Sbjct: 124 AGSLLMFLSYWITFPIAFIVGRI 146
>U28735-4|AAF99953.1| 488|Caenorhabditis elegans Hypothetical
protein F48E3.2 protein.
Length = 488
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +3
Query: 300 LILAGVITTIGSSVPVXYNIGVVNTPAEVIKQFCNESFIXRYDVVLDE-QWMNVLWSSVV 476
L++ + I + + Y NT + F NES Y + E +W WS+++
Sbjct: 8 LLILSAVLAITAIFQMGYTNAYPNTAIGSFRIFLNESANEPYTLSNSEFEWA---WSAML 64
Query: 477 SIFIVGGCTGSILGSYLADSLGXK 548
+I+ +G GS++ + +AD +G K
Sbjct: 65 AIYFIGFAAGSVISAGVADRIGRK 88
>Z99270-1|CAB16470.4| 500|Caenorhabditis elegans Hypothetical
protein Y37A1A.3 protein.
Length = 500
Score = 36.7 bits (81), Expect = 0.014
Identities = 23/100 (23%), Positives = 42/100 (42%)
Frame = +3
Query: 306 LAGVITTIGSSVPVXYNIGVVNTPAEVIKQFCNESFIXRYDVVLDEQWMNVLWSSVVSIF 485
L +I GSS + + + N +F N S + + WS +V+IF
Sbjct: 26 LMAIIVAFGSSFSFGFQLLITNPAQGAFIKFLNASKHSNNPDDNELSHLENEWSFIVAIF 85
Query: 486 IVGGCTGSILGSYLADSLGXKMATIATGALWIAGALLFLL 605
+G TG+ L +A+ G K I + + ++L ++
Sbjct: 86 FLGSATGAFLIKTVAERFGRKKGVIVSLFAQVTSSMLTIV 125
>AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical
protein Y51A2D.4 protein.
Length = 606
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +3
Query: 450 MNVLWSSV-VSIFIVGGCTGSILGSYLADSLGXKMATIATGALWIAGALLFLLCRTANSX 626
M+ +W V VSI GS++ +D +G + + A++ GA L+C + +
Sbjct: 62 MDTVWQEVLVSISPGMAAVGSLMSGTSSDYIGRRKVILGASAIFTIGA---LVCAASVNK 118
Query: 627 XMLIIGRL 650
ML++GR+
Sbjct: 119 IMLLVGRV 126
>U80842-5|AAK71419.2| 305|Caenorhabditis elegans Serpentine
receptor, class i protein50 protein.
Length = 305
Score = 31.9 bits (69), Expect = 0.41
Identities = 19/76 (25%), Positives = 33/76 (43%)
Frame = +3
Query: 105 PDF*PSLSHLCASITLLWGTEQLVLPCLAENRRRESFQYVPQPVFNENXHWTXTNEYTAT 284
P+ ++ +C SI W +L LA +R S +V ++ N +
Sbjct: 129 PEMKLNIFRICMSI---WPIFTYILIYLAGMKREVSMAFVVLTYPQYISEFSKLNNFAIY 185
Query: 285 GWSFYLILAGVITTIG 332
WSF+ I +G++ T G
Sbjct: 186 QWSFWFIFSGIVATFG 201
>U23453-2|AAV58891.1| 464|Caenorhabditis elegans Hypothetical
protein B0252.3c protein.
Length = 464
Score = 31.9 bits (69), Expect = 0.41
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +3
Query: 375 PAEVIKQFCNESFIX---RYDVVLDEQWMNVLWSSVVSIFIVGGCTGSILGSYLADSLGX 545
P+ V+K N SFI +D+ D W L S + ++VG G + LAD G
Sbjct: 44 PSFVVKASENSSFIGVADEFDLTGDASW---LAESTTTFYMVGNMIGGMFIPPLADHYGR 100
Query: 546 KMATIATGALWIAGALL 596
+AT L G ++
Sbjct: 101 LPVFVATVLLMAVGGMI 117
>U23453-1|AAP86622.1| 484|Caenorhabditis elegans Hypothetical
protein B0252.3b protein.
Length = 484
Score = 31.9 bits (69), Expect = 0.41
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +3
Query: 375 PAEVIKQFCNESFIX---RYDVVLDEQWMNVLWSSVVSIFIVGGCTGSILGSYLADSLGX 545
P+ V+K N SFI +D+ D W L S + ++VG G + LAD G
Sbjct: 64 PSFVVKASENSSFIGVADEFDLTGDASW---LAESTTTFYMVGNMIGGMFIPPLADHYGR 120
Query: 546 KMATIATGALWIAGALL 596
+AT L G ++
Sbjct: 121 LPVFVATVLLMAVGGMI 137
>Z93388-5|CAB60295.1| 387|Caenorhabditis elegans Hypothetical
protein T10C6.6b protein.
Length = 387
Score = 30.7 bits (66), Expect = 0.94
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 492 GGCTGSILGSYLADSLGXKMATIATGALWIAGALLF 599
GG GS+LG Y+ D +G + I + G+L F
Sbjct: 221 GGIIGSVLGGYITDKMGKRSPLIVAMLVCSIGSLYF 256
>Z93388-4|CAB07662.1| 456|Caenorhabditis elegans Hypothetical
protein T10C6.6a protein.
Length = 456
Score = 30.7 bits (66), Expect = 0.94
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 492 GGCTGSILGSYLADSLGXKMATIATGALWIAGALLF 599
GG GS+LG Y+ D +G + I + G+L F
Sbjct: 290 GGIIGSVLGGYITDKMGKRSPLIVAMLVCSIGSLYF 325
>Z72508-9|CAA96639.2| 410|Caenorhabditis elegans Hypothetical
protein F28H7.8 protein.
Length = 410
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +3
Query: 357 IGVVNTPAEVIKQFCNE---SFIXRYDVVLDEQWMNVLWSSV 473
+GVVN P V Q + FI ++ V+ ++NVLWS++
Sbjct: 172 LGVVNGPFRVSWQLVGQHYREFIDKFIVINSPSYINVLWSAL 213
>U28737-2|AAA68272.1| 455|Caenorhabditis elegans Patterned
expression site protein23 protein.
Length = 455
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 432 VLDEQWMNVLW-SSVVSIFIVGGCTGSILGSYLADSLG 542
+ D+ ++VLW +V++I VG GSIL Y++D G
Sbjct: 70 ITDDTNVSVLWWENVIAIQQVGIFVGSILFGYISDHFG 107
>AF125952-2|AAD14700.1| 478|Caenorhabditis elegans Hypothetical
protein C01B4.8 protein.
Length = 478
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +3
Query: 465 SSVVSIFIVGGCTGSILGSYLADSLGXKMATIATGALWIAGALLFLLCRTANSXXMLII 641
S V S VGG G ++ L +G ++ G I G +LF L N +L++
Sbjct: 87 SLVFSSMAVGGLLGLLIAMPLMHRVGVRLVLSICGVFSILGTILFPLAVEWNFFSVLVV 145
>AC006722-8|AAK68418.2| 478|Caenorhabditis elegans Hypothetical
protein Y19D10A.5 protein.
Length = 478
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +3
Query: 465 SSVVSIFIVGGCTGSILGSYLADSLGXKMATIATGALWIAGALLFLLCRTANSXXMLII 641
S V S VGG G ++ L +G ++ G I G +LF L N +L++
Sbjct: 87 SLVFSSMAVGGLLGLLIAMPLMHRVGVRLVLSICGVFSILGTILFPLAVEWNFFSVLVV 145
>Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +3
Query: 420 RYDVVLDEQWMNVLWSSVVSIFIVGGCTGSILGSYLADSLGXKMATIATGALWIAGALLF 599
R+++ D W+ ++V +++ +G GS +AD +G K L + ALL
Sbjct: 135 RWEMDGDNGWIR---ATVQAVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLL 191
Query: 600 LLCRT 614
++ T
Sbjct: 192 IVAPT 196
>Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +3
Query: 420 RYDVVLDEQWMNVLWSSVVSIFIVGGCTGSILGSYLADSLGXKMATIATGALWIAGALLF 599
R+++ D W+ ++V +++ +G GS +AD +G K L + ALL
Sbjct: 101 RWEMDGDNGWIR---ATVQAVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLL 157
Query: 600 LLCRT 614
++ T
Sbjct: 158 IVAPT 162
>AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +3
Query: 420 RYDVVLDEQWMNVLWSSVVSIFIVGGCTGSILGSYLADSLGXKMATIATGALWIAGALLF 599
R+++ D W+ ++V +++ +G GS +AD +G K L + ALL
Sbjct: 135 RWEMDGDNGWIR---ATVQAVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLL 191
Query: 600 LLCRT 614
++ T
Sbjct: 192 IVAPT 196
>AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +3
Query: 420 RYDVVLDEQWMNVLWSSVVSIFIVGGCTGSILGSYLADSLGXKMATIATGALWIAGALLF 599
R+++ D W+ ++V +++ +G GS +AD +G K L + ALL
Sbjct: 101 RWEMDGDNGWIR---ATVQAVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLL 157
Query: 600 LLCRT 614
++ T
Sbjct: 158 IVAPT 162
>AF016676-1|AAG24103.1| 598|Caenorhabditis elegans Hypothetical
protein F41B5.6 protein.
Length = 598
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 485 EDRHHRRPKNIHPLLVQHYI 426
E+ HH N HPL VQH++
Sbjct: 341 EETHHSSKANHHPLSVQHHL 360
>AF101316-2|AAC69230.1| 692|Caenorhabditis elegans Hypothetical
protein F52F10.4 protein.
Length = 692
Score = 27.5 bits (58), Expect = 8.7
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Frame = +3
Query: 300 LILAGVITTIGSSVPVXYNIGVVNTPAEVIKQFCNESFIXRYDVVLDEQWMNVLWSSVVS 479
+I+AG + GS + GV N PA++I F +++ + W+
Sbjct: 433 IIVAGCV---GSIITTYILFGVYNVPADIIGNGDQTKF---FNIAYSKPWIR------CP 480
Query: 480 IFIVGGCTGSILGSYLADSLGXKMATIATG---ALWIAGALLF 599
++VG TG +L +Y + + A G A IAG LF
Sbjct: 481 PYLVGLLTGYLLATYGSRKIRLNWALAIAGWITAFVIAGFCLF 523
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,323,301
Number of Sequences: 27780
Number of extensions: 291772
Number of successful extensions: 719
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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