Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_O23
         (651 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342...   258   4e-69
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327...   255   3e-68
01_06_0083 + 26283492-26283756,26284255-26284467,26284620-262847...    29   2.4  
03_02_0733 - 10801380-10802009                                         29   3.2  
01_05_0125 - 18382402-18382761,18382863-18383036                       29   4.2  
05_04_0324 - 20273797-20274261                                         28   7.4  

>12_01_0435 +
           3428552-3428636,3429242-3429352,3429434-3429738,
           3429821-3430230,3430323-3430556,3430934-3431378,
           3432300-3432390,3433292-3433518,3433786-3433861,
           3434009-3434134,3434221-3434384
          Length = 757

 Score =  258 bits (631), Expect = 4e-69
 Identities = 117/207 (56%), Positives = 150/207 (72%), Gaps = 1/207 (0%)
 Frame = +2

Query: 32  VAQKIFTHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 211
           ++ + F HP HGS+GF P+KRS RHRGKVK+FPKDD SKP HLT+F+GYKAGMTH+VRE 
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREV 60

Query: 212 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYK 391
           ++PGSK++KKE  EAVTIIETPP+V VG+V Y+ TP GLR+L +VWA+H+SE+ RRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYK 120

Query: 392 NWYXXXXXXXXXXXXXWQDELGRKSIXKDFKXMIRYCXVVRVIAHTQMXLLK-QRQKXAH 568
           NW              +  + G+K I    + M +Y  +VRVIAHTQ+  +K  +QK AH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAH 180

Query: 569 IMEIQLNGGTIXDKXKWATXHLEKPIP 649
           +MEIQ+NGGTI DK  +     EK IP
Sbjct: 181 LMEIQINGGTIADKVDYGYKFFEKEIP 207


>11_01_0427 +
           3274817-3274901,3275587-3275697,3275979-3276283,
           3276406-3276815,3276942-3277200
          Length = 389

 Score =  255 bits (624), Expect = 3e-68
 Identities = 116/207 (56%), Positives = 149/207 (71%), Gaps = 1/207 (0%)
 Frame = +2

Query: 32  VAQKIFTHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 211
           ++ + F HP HGS+GF P+KRS RHRGKVK+FPKDD +KP HLT+F+GYKAGMTH+VRE 
Sbjct: 1   MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVNKPCHLTSFVGYKAGMTHIVREV 60

Query: 212 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYK 391
           ++PGSK++KKE  EAVTIIETPP+V VG+V Y+ TP GLR+L +VWA+H+SE+ RRRFYK
Sbjct: 61  EKPGSKLHKKETCEAVTIIETPPIVVVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYK 120

Query: 392 NWYXXXXXXXXXXXXXWQDELGRKSIXKDFKXMIRYCXVVRVIAHTQMXLLK-QRQKXAH 568
           NW              +  + G+K I    + M +Y  VVRVI HTQ+  +K  +QK AH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASVVRVIVHTQIRKMKGLKQKKAH 180

Query: 569 IMEIQLNGGTIXDKXKWATXHLEKPIP 649
           +MEIQ+NGGTI DK  +     EK IP
Sbjct: 181 LMEIQINGGTIADKVDYGYKFFEKEIP 207


>01_06_0083 +
           26283492-26283756,26284255-26284467,26284620-26284771,
           26284884-26285157,26285277-26285485
          Length = 370

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +1

Query: 466 NXKRFQEXDPLLXCCKSHCPHSNEXVKTATKEXSHYGNP 582
           N +RF   DPLL CC  H P+      T  +  + +G+P
Sbjct: 297 NPRRFGINDPLLACCGGHGPYHTG--ATCDRTATVWGDP 333


>03_02_0733 - 10801380-10802009
          Length = 209

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 23/77 (29%), Positives = 35/77 (45%)
 Frame = +2

Query: 32  VAQKIFTHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 211
           VA+ +  HP H  +     ++ RRH+GK  A P     K   L A     AG  +V+  P
Sbjct: 35  VAELMMDHPRHFVIDARDLQQQRRHKGKAGA-PPPPGGKVAPLPADHVLGAGGVYVLL-P 92

Query: 212 DRPGSKINKKEIVEAVT 262
                K++ +E   A+T
Sbjct: 93  ATTRGKVSAEEARRALT 109


>01_05_0125 - 18382402-18382761,18382863-18383036
          Length = 177

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -2

Query: 380 DVDSLQTYAPPRQSTERVVHEGXQCIQQHRHKPSE 276
           ++ +L    PPR ST R+V E   C+ + R + +E
Sbjct: 47  ELGALLPNLPPRASTTRIVEEAIACVGELRARTAE 81


>05_04_0324 - 20273797-20274261
          Length = 154

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
 Frame = +2

Query: 125 FPKDDPSKPVHLTAFIGYKAGMTHVVRE--PDRPGSKINKKEIVEAVTIIETPPMVCVGV 298
           FP D+P K VH+    G  + +T ++ E  P +    +N     EA   +  P   CVGV
Sbjct: 60  FPPDNPQKFVHVHRVFG-ASNVTKLLNELHPYQREDAVNSL-AYEADMRLRDPVYGCVGV 117

Query: 299 VGYIXTPHGLRAL 337
           +  +   H LR L
Sbjct: 118 ISVL--QHQLRQL 128


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,639,621
Number of Sequences: 37544
Number of extensions: 349670
Number of successful extensions: 756
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)