BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P02_F_O23 (651 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342... 258 4e-69 11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327... 255 3e-68 01_06_0083 + 26283492-26283756,26284255-26284467,26284620-262847... 29 2.4 03_02_0733 - 10801380-10802009 29 3.2 01_05_0125 - 18382402-18382761,18382863-18383036 29 4.2 05_04_0324 - 20273797-20274261 28 7.4 >12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738, 3429821-3430230,3430323-3430556,3430934-3431378, 3432300-3432390,3433292-3433518,3433786-3433861, 3434009-3434134,3434221-3434384 Length = 757 Score = 258 bits (631), Expect = 4e-69 Identities = 117/207 (56%), Positives = 150/207 (72%), Gaps = 1/207 (0%) Frame = +2 Query: 32 VAQKIFTHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 211 ++ + F HP HGS+GF P+KRS RHRGKVK+FPKDD SKP HLT+F+GYKAGMTH+VRE Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREV 60 Query: 212 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYK 391 ++PGSK++KKE EAVTIIETPP+V VG+V Y+ TP GLR+L +VWA+H+SE+ RRRFYK Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYK 120 Query: 392 NWYXXXXXXXXXXXXXWQDELGRKSIXKDFKXMIRYCXVVRVIAHTQMXLLK-QRQKXAH 568 NW + + G+K I + M +Y +VRVIAHTQ+ +K +QK AH Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAH 180 Query: 569 IMEIQLNGGTIXDKXKWATXHLEKPIP 649 +MEIQ+NGGTI DK + EK IP Sbjct: 181 LMEIQINGGTIADKVDYGYKFFEKEIP 207 >11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283, 3276406-3276815,3276942-3277200 Length = 389 Score = 255 bits (624), Expect = 3e-68 Identities = 116/207 (56%), Positives = 149/207 (71%), Gaps = 1/207 (0%) Frame = +2 Query: 32 VAQKIFTHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 211 ++ + F HP HGS+GF P+KRS RHRGKVK+FPKDD +KP HLT+F+GYKAGMTH+VRE Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVNKPCHLTSFVGYKAGMTHIVREV 60 Query: 212 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYK 391 ++PGSK++KKE EAVTIIETPP+V VG+V Y+ TP GLR+L +VWA+H+SE+ RRRFYK Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPIVVVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYK 120 Query: 392 NWYXXXXXXXXXXXXXWQDELGRKSIXKDFKXMIRYCXVVRVIAHTQMXLLK-QRQKXAH 568 NW + + G+K I + M +Y VVRVI HTQ+ +K +QK AH Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASVVRVIVHTQIRKMKGLKQKKAH 180 Query: 569 IMEIQLNGGTIXDKXKWATXHLEKPIP 649 +MEIQ+NGGTI DK + EK IP Sbjct: 181 LMEIQINGGTIADKVDYGYKFFEKEIP 207 >01_06_0083 + 26283492-26283756,26284255-26284467,26284620-26284771, 26284884-26285157,26285277-26285485 Length = 370 Score = 29.5 bits (63), Expect = 2.4 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +1 Query: 466 NXKRFQEXDPLLXCCKSHCPHSNEXVKTATKEXSHYGNP 582 N +RF DPLL CC H P+ T + + +G+P Sbjct: 297 NPRRFGINDPLLACCGGHGPYHTG--ATCDRTATVWGDP 333 >03_02_0733 - 10801380-10802009 Length = 209 Score = 29.1 bits (62), Expect = 3.2 Identities = 23/77 (29%), Positives = 35/77 (45%) Frame = +2 Query: 32 VAQKIFTHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 211 VA+ + HP H + ++ RRH+GK A P K L A AG +V+ P Sbjct: 35 VAELMMDHPRHFVIDARDLQQQRRHKGKAGA-PPPPGGKVAPLPADHVLGAGGVYVLL-P 92 Query: 212 DRPGSKINKKEIVEAVT 262 K++ +E A+T Sbjct: 93 ATTRGKVSAEEARRALT 109 >01_05_0125 - 18382402-18382761,18382863-18383036 Length = 177 Score = 28.7 bits (61), Expect = 4.2 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = -2 Query: 380 DVDSLQTYAPPRQSTERVVHEGXQCIQQHRHKPSE 276 ++ +L PPR ST R+V E C+ + R + +E Sbjct: 47 ELGALLPNLPPRASTTRIVEEAIACVGELRARTAE 81 >05_04_0324 - 20273797-20274261 Length = 154 Score = 27.9 bits (59), Expect = 7.4 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%) Frame = +2 Query: 125 FPKDDPSKPVHLTAFIGYKAGMTHVVRE--PDRPGSKINKKEIVEAVTIIETPPMVCVGV 298 FP D+P K VH+ G + +T ++ E P + +N EA + P CVGV Sbjct: 60 FPPDNPQKFVHVHRVFG-ASNVTKLLNELHPYQREDAVNSL-AYEADMRLRDPVYGCVGV 117 Query: 299 VGYIXTPHGLRAL 337 + + H LR L Sbjct: 118 ISVL--QHQLRQL 128 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,639,621 Number of Sequences: 37544 Number of extensions: 349670 Number of successful extensions: 756 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 742 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 754 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1620349964 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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