Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_O23
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 286 8e-78
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 286 8e-78
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 286 8e-78
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 286 8e-78
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 239 2e-63
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 239 2e-63
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 93 2e-19
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 93 2e-19
AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical ... 29 2.9
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 286 bits (702), Expect = 8e-78
Identities = 125/205 (60%), Positives = 155/205 (75%)
Frame = +2
Query: 32 VAQKIFTHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 211
++ + F+ P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 212 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYK 391
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY+ TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 392 NWYXXXXXXXXXXXXXWQDELGRKSIXKDFKXMIRYCXVVRVIAHTQMXLLKQRQKXAHI 571
NW WQDE G+K I DF + +YC +RVIAHTQM +L++RQK AH+
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHL 180
Query: 572 MEIQLNGGTIXDKXKWATXHLEKPI 646
+EIQ+NGGTI K WA HLEK +
Sbjct: 181 VEIQVNGGTIEQKVDWAREHLEKQV 205
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 286 bits (702), Expect = 8e-78
Identities = 125/205 (60%), Positives = 155/205 (75%)
Frame = +2
Query: 32 VAQKIFTHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 211
++ + F+ P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 212 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYK 391
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY+ TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 392 NWYXXXXXXXXXXXXXWQDELGRKSIXKDFKXMIRYCXVVRVIAHTQMXLLKQRQKXAHI 571
NW WQDE G+K I DF + +YC +RVIAHTQM +L++RQK AH+
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHL 180
Query: 572 MEIQLNGGTIXDKXKWATXHLEKPI 646
+EIQ+NGGTI K WA HLEK +
Sbjct: 181 VEIQVNGGTIEQKVDWAREHLEKQV 205
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 286 bits (702), Expect = 8e-78
Identities = 125/205 (60%), Positives = 155/205 (75%)
Frame = +2
Query: 32 VAQKIFTHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 211
++ + F+ P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 212 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYK 391
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY+ TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 392 NWYXXXXXXXXXXXXXWQDELGRKSIXKDFKXMIRYCXVVRVIAHTQMXLLKQRQKXAHI 571
NW WQDE G+K I DF + +YC +RVIAHTQM +L++RQK AH+
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHL 180
Query: 572 MEIQLNGGTIXDKXKWATXHLEKPI 646
+EIQ+NGGTI K WA HLEK +
Sbjct: 181 VEIQVNGGTIEQKVDWAREHLEKQV 205
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 286 bits (702), Expect = 8e-78
Identities = 125/205 (60%), Positives = 155/205 (75%)
Frame = +2
Query: 32 VAQKIFTHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 211
++ + F+ P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 212 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYK 391
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY+ TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 392 NWYXXXXXXXXXXXXXWQDELGRKSIXKDFKXMIRYCXVVRVIAHTQMXLLKQRQKXAHI 571
NW WQDE G+K I DF + +YC +RVIAHTQM +L++RQK AH+
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHL 180
Query: 572 MEIQLNGGTIXDKXKWATXHLEKPI 646
+EIQ+NGGTI K WA HLEK +
Sbjct: 181 VEIQVNGGTIEQKVDWAREHLEKQV 205
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 239 bits (584), Expect = 2e-63
Identities = 104/168 (61%), Positives = 127/168 (75%)
Frame = +2
Query: 32 VAQKIFTHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 211
++ + F+ P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 212 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYK 391
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY+ TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 392 NWYXXXXXXXXXXXXXWQDELGRKSIXKDFKXMIRYCXVVRVIAHTQM 535
NW WQDE G+K I DF + +YC +RVIAHTQM
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 239 bits (584), Expect = 2e-63
Identities = 104/168 (61%), Positives = 127/168 (75%)
Frame = +2
Query: 32 VAQKIFTHPAHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 211
++ + F+ P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 212 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYK 391
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY+ TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 392 NWYXXXXXXXXXXXXXWQDELGRKSIXKDFKXMIRYCXVVRVIAHTQM 535
NW WQDE G+K I DF + +YC +RVIAHTQM
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 93.1 bits (221), Expect = 2e-19
Identities = 40/69 (57%), Positives = 51/69 (73%)
Frame = +2
Query: 440 WQDELGRKSIXKDFKXMIRYCXVVRVIAHTQMXLLKQRQKXAHIMEIQLNGGTIXDKXKW 619
WQDE G+K I DF + +YC +RVIAHTQM +L++RQK AH++EIQ+NGGTI K W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 620 ATXHLEKPI 646
A HLEK +
Sbjct: 99 AREHLEKQV 107
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +2
Query: 32 VAQKIFTHPAHGSMGFYPKKRSRRHRGKVKAFPK 133
++ + F+ P HG MGF PKKRSR +RG++KAF K
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 93.1 bits (221), Expect = 2e-19
Identities = 40/69 (57%), Positives = 51/69 (73%)
Frame = +2
Query: 440 WQDELGRKSIXKDFKXMIRYCXVVRVIAHTQMXLLKQRQKXAHIMEIQLNGGTIXDKXKW 619
WQDE G+K I DF + +YC +RVIAHTQM +L++RQK AH++EIQ+NGGTI K W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 620 ATXHLEKPI 646
A HLEK +
Sbjct: 99 AREHLEKQV 107
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +2
Query: 32 VAQKIFTHPAHGSMGFYPKKRSRRHRGKVKAFPK 133
++ + F+ P HG MGF PKKRSR +RG++KAF K
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical
protein F56F4.2 protein.
Length = 299
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +2
Query: 272 TPPMVCVGVVGYIXTPHGLRALLTVWAEHMSEDCRRRFYKNWY 400
T P + GY+ G+R VW E S+ + KNW+
Sbjct: 201 TDPNGYFDIAGYVDQSSGVRGRFWVWHECFSQKYHKDPCKNWF 243
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,596,288
Number of Sequences: 27780
Number of extensions: 288865
Number of successful extensions: 595
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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