Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_O22
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117195-21|CAB55033.2|  313|Caenorhabditis elegans Hypothetical...   200   7e-52
AL117195-8|CAB55030.1|  258|Caenorhabditis elegans Hypothetical ...   189   2e-48
U88174-6|AAB42272.1|  680|Caenorhabditis elegans Hypothetical pr...    31   0.71 
Z83110-4|CAB05526.1|   88|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z82264-7|CAB05164.3|  499|Caenorhabditis elegans Hypothetical pr...    28   5.0  
U70853-6|ABQ13065.1|  185|Caenorhabditis elegans Hypothetical pr...    28   5.0  
U70853-4|AAV34789.1|  195|Caenorhabditis elegans Hypothetical pr...    28   5.0  
U70853-3|AAK77617.1|  246|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AC024806-2|AAK84613.1|  433|Caenorhabditis elegans Hypothetical ...    28   6.6  
AC024779-2|AAK68485.1|  299|Caenorhabditis elegans Serpentine re...    27   8.7  
AC024779-1|AAP86615.1|  304|Caenorhabditis elegans Serpentine re...    27   8.7  

>AL117195-21|CAB55033.2|  313|Caenorhabditis elegans Hypothetical
           protein Y57A10A.28 protein.
          Length = 313

 Score =  200 bits (488), Expect = 7e-52
 Identities = 85/176 (48%), Positives = 123/176 (69%)
 Frame = +1

Query: 124 TMDPESFLDLANQVIKLKMYPYFDIAHSLLCALAVREDLGSGAQAFSRKHPLSCWLSTML 303
           ++D ++ +D    V KLK+YPYFD AH +L  L+VR DLG  A +FSRKHP SCWLS ML
Sbjct: 9   SIDHDTLIDAGGYVQKLKLYPYFDAAHYVLTCLSVRHDLGPDAISFSRKHPFSCWLSCML 68

Query: 304 VIFAGGMVANGLLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVXYXVXXFLPVKVVAAA 483
           + FAG  ++  LLGEPI++PLK    +++G++ WYLVFY+PFDV + +  + PVK+  + 
Sbjct: 69  MSFAGSFLSCFLLGEPIISPLKQHADILLGSIVWYLVFYSPFDVVFRLATWFPVKLGLSV 128

Query: 484 MKEIYXAXKVYDGVSHAAKLYPNAYVIMVIVGTLKGNGAGFTKLVERLIRGAWTPT 651
           +KE+    K+  GV HA ++YP +Y++ ++VG  KG G+G  K+VE+L RG W PT
Sbjct: 129 LKEVQRTHKIAAGVKHAVRIYPESYLVQILVGVAKGAGSGVVKIVEQLARGTWHPT 184


>AL117195-8|CAB55030.1|  258|Caenorhabditis elegans Hypothetical
           protein Y57A10A.10 protein.
          Length = 258

 Score =  189 bits (460), Expect = 2e-48
 Identities = 82/144 (56%), Positives = 104/144 (72%)
 Frame = +1

Query: 220 LAVREDLGSGAQAFSRKHPLSCWLSTMLVIFAGGMVANGLLGEPILAPLKNTPQLVIGTV 399
           + VR+DLGS A  FSRKHPLSCWLS+ML+ FA   +AN LLGEP++AP K    +++ T+
Sbjct: 3   IEVRDDLGSAASIFSRKHPLSCWLSSMLMCFADAFLANFLLGEPVIAPFKRHDDIILATI 62

Query: 400 TWYLVFYTPFDVXYXVXXFLPVKVVAAAMKEIYXAXKVYDGVSHAAKLYPNAYVIMVIVG 579
            WYLVFY PFD  Y +    PVK V A MKE+  A KV  GVSHAAKLYPN+Y++ V+VG
Sbjct: 63  IWYLVFYAPFDGIYKIAKITPVKCVLAVMKEVKRAYKVSHGVSHAAKLYPNSYIVQVLVG 122

Query: 580 TLKGNGAGFTKLVERLIRGAWTPT 651
           T KG G+G  + +E+L+RG W PT
Sbjct: 123 TAKGAGSGIVRTLEQLVRGVWLPT 146


>U88174-6|AAB42272.1|  680|Caenorhabditis elegans Hypothetical
           protein M01A10.1 protein.
          Length = 680

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 15/62 (24%), Positives = 33/62 (53%)
 Frame = +1

Query: 19  RPRLVACVRXLITLLSVFSCTIKLQYNGEIEQKTNTMDPESFLDLANQVIKLKMYPYFDI 198
           R RL    +    ++ +F+C IKL+   +  +KT+ +    F D+++  +  +M   +D+
Sbjct: 2   RKRLTQAQKMFPQIIVIFNCQIKLKLIAKETKKTHDISGMFFQDVSSLTMNSRMVVPYDL 61

Query: 199 AH 204
           A+
Sbjct: 62  AN 63


>Z83110-4|CAB05526.1|   88|Caenorhabditis elegans Hypothetical
           protein F57C2.4 protein.
          Length = 88

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = +1

Query: 298 MLVIFAGGMVANGLLGEPI 354
           ++V  AGG+VA+G+ GEPI
Sbjct: 9   LVVALAGGIVAHGIKGEPI 27


>Z82264-7|CAB05164.3|  499|Caenorhabditis elegans Hypothetical
           protein C49C3.13 protein.
          Length = 499

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
 Frame = -1

Query: 385 LIGVYSSTAPKWVRLEDHWLPYRRRI--SLA*WTASMTVDASWKRPGH 248
           +   Y ST   W    D+WL  RR    S   WT    VD  W +PG+
Sbjct: 136 IAATYVSTG--WFPYMDNWLGLRRSCDNSTYIWTDGTPVDYLWWQPGY 181


>U70853-6|ABQ13065.1|  185|Caenorhabditis elegans Hypothetical
           protein M01H9.3d protein.
          Length = 185

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = -3

Query: 374 VFFNGAKMGSPRRPLATIPPANITSIVDSQHDSGCFLEKAWAPDPKSS 231
           V F     GSP  P A+IP A     +   +D+ C     W P  +S+
Sbjct: 16  VTFKAVTGGSPHSPSASIPIAGADDSIRPDYDTDCL----WKPPTRSA 59


>U70853-4|AAV34789.1|  195|Caenorhabditis elegans Hypothetical
           protein M01H9.3c protein.
          Length = 195

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = -3

Query: 374 VFFNGAKMGSPRRPLATIPPANITSIVDSQHDSGCFLEKAWAPDPKSS 231
           V F     GSP  P A+IP A     +   +D+ C     W P  +S+
Sbjct: 26  VTFKAVTGGSPHSPSASIPIAGADDSIRPDYDTDCL----WKPPTRSA 69


>U70853-3|AAK77617.1|  246|Caenorhabditis elegans Hypothetical
           protein M01H9.3a protein.
          Length = 246

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = -3

Query: 374 VFFNGAKMGSPRRPLATIPPANITSIVDSQHDSGCFLEKAWAPDPKSS 231
           V F     GSP  P A+IP A     +   +D+ C     W P  +S+
Sbjct: 77  VTFKAVTGGSPHSPSASIPIAGADDSIRPDYDTDCL----WKPPTRSA 120


>AC024806-2|AAK84613.1|  433|Caenorhabditis elegans Hypothetical
           protein Y52E8A.4 protein.
          Length = 433

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 25/104 (24%), Positives = 40/104 (38%)
 Frame = +1

Query: 289 LSTMLVIFAGGMVANGLLGEPILAPLKNTPQLVIGTVTWYLVFYTPFDVXYXVXXFLPVK 468
           +ST  +I    ++++  + EP+   L       I     YL+    +        F P  
Sbjct: 14  VSTSFLILFSAVLSHEFIAEPLFHGLSEANIGGIQARDGYLMLCILYFTNTVSCFFAPFV 73

Query: 469 VVAAAMKEIYXAXKVYDGVSHAAKLYPNAYVIMVIVGTLKGNGA 600
           V   + K       V      AA ++PN Y++MV    L G GA
Sbjct: 74  VSRISGKWAMVLGMVAAFCMQAAYMFPNRYILMV-TSALGGAGA 116


>AC024779-2|AAK68485.1|  299|Caenorhabditis elegans Serpentine
           receptor, class x protein50, isoform a protein.
          Length = 299

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = +2

Query: 29  WSHACVSLSHYCRCLVVP*NYNTTVKLN--KKL 121
           +SH C+SL+ +C  +V P  Y+T   ++  KKL
Sbjct: 73  YSHLCISLNRFC-SIVAPIKYDTIFSMSNTKKL 104


>AC024779-1|AAP86615.1|  304|Caenorhabditis elegans Serpentine
           receptor, class x protein50, isoform b protein.
          Length = 304

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = +2

Query: 29  WSHACVSLSHYCRCLVVP*NYNTTVKLN--KKL 121
           +SH C+SL+ +C  +V P  Y+T   ++  KKL
Sbjct: 84  YSHLCISLNRFC-SIVAPIKYDTIFSMSNTKKL 115


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,281,337
Number of Sequences: 27780
Number of extensions: 319977
Number of successful extensions: 791
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)