Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_O14
(655 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_22570| Best HMM Match : Filament (HMM E-Value=0.1) 29 2.5
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 29 3.3
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 29 3.3
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_25881| Best HMM Match : SNARE (HMM E-Value=9.8) 28 5.8
SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08) 28 5.8
SB_8304| Best HMM Match : PLAT (HMM E-Value=0) 28 7.6
SB_3185| Best HMM Match : Sec63 (HMM E-Value=0) 28 7.6
>SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 154 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLN 291
+ IEH + K +QQF+S K+ D D S K+ + ++ L+
Sbjct: 468 RSIEHKIQRLEKKFDQQFSSTEKNMDKNDSSLPKKEIFQQIVTDLS 513
>SB_22570| Best HMM Match : Filament (HMM E-Value=0.1)
Length = 601
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +2
Query: 353 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXK 502
L Q R+N E + L+ +EK +LR++L V Q + +L K
Sbjct: 103 LTQERENYETREKTLQSKITSIEKENNSLRDELNKTVSELTQTTAELQDK 152
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Frame = +2
Query: 347 EALEQSRQNIERTAEE-LRKAHPDVEKNATALR---------EKLQAAVQNTVQESHKLA 496
E EQ+RQ +E T + + H +VE + L+ EKL Q TVQ+ +
Sbjct: 700 EDAEQARQALEETMHTTIEELHEEVETLRSRLQDVGQAKLEAEKLVQDTQATVQQQSEEV 759
Query: 497 XKVSSNVQXTNXKLA 541
+SS++ N +LA
Sbjct: 760 RSLSSDIDRLNLQLA 774
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/75 (25%), Positives = 39/75 (52%)
Frame = +2
Query: 368 QNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNVQXTNXKLAPK 547
++I+ EL K + D+E+ T LRE L++ V++ + +LA + +Q L +
Sbjct: 1407 ESIQAEKSELGKRNWDLEEIVTNLREDLESLVKHRAELEEQLA-NFGAPLQTNVSHLRTE 1465
Query: 548 IXAAYDDFAXNTXXV 592
I ++ D + ++ V
Sbjct: 1466 ISSSAGDDSCSSAAV 1480
>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2208
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +2
Query: 320 LGDANGXAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAX 499
L D + E+ + ++ IE E++ +ATA +E+L++AV+ + KL
Sbjct: 929 LKDLLKVSRESESKLQERIESLREKITGLELAAINDATASKEELESAVEEKAKAETKLKV 988
Query: 500 KVSS 511
K+S+
Sbjct: 989 KISA 992
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/73 (23%), Positives = 32/73 (43%)
Frame = +2
Query: 332 NGXAXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSS 511
N EAL+ + + +E+ + +K+ TAL+E+L + VQ +E K +
Sbjct: 642 NNELNEALQAAETKNKAMEKEIDALKQNKDKDVTALKEELTSEVQKYKEEKLMAEEKHLA 701
Query: 512 NVQXTNXKLAPKI 550
Q + K+
Sbjct: 702 EAQSIKVEYEKKV 714
>SB_25881| Best HMM Match : SNARE (HMM E-Value=9.8)
Length = 251
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +2
Query: 377 ERTAEELRKAHPDVEKNATALREKLQAAVQNTVQE 481
+RT EE+R+ D+++ +RE + + +N Q+
Sbjct: 172 KRTVEEIRRLDSDIQQRVVKIREDIATSGENIQQQ 206
>SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08)
Length = 1183
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +2
Query: 353 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNVQXTNX 532
L++ R +ERT LR+ + E + +RE ++ +N+V K +V +VQ TN
Sbjct: 393 LKKERLQMERTVATLRRQKTEFEAEISVIRE-VKIREENSVNVLRK--ERVDLDVQVTNL 449
Query: 533 K 535
+
Sbjct: 450 R 450
>SB_8304| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1182
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +2
Query: 353 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNVQXTNX 532
+E+ +Q+ +E VE+N +EK AVQN + E ++A + N
Sbjct: 561 VEEEQQDEPVKQDEQENRDEPVEQNEQEKQEKALDAVQNIINEELRMAAAEERKKEIENK 620
Query: 533 K 535
K
Sbjct: 621 K 621
>SB_3185| Best HMM Match : Sec63 (HMM E-Value=0)
Length = 2590
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/68 (27%), Positives = 29/68 (42%)
Frame = +2
Query: 353 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNVQXTNX 532
L++ IE+ ++L A EKN L E +A+QNT+Q + +
Sbjct: 253 LQEYTDEIEKLKKDLFAAR---EKNGIFLSEDSYSAMQNTIQSQTSRITHFETRLPEMEA 309
Query: 533 KLAPKIXA 556
A KI A
Sbjct: 310 DFAAKIEA 317
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,190,564
Number of Sequences: 59808
Number of extensions: 238829
Number of successful extensions: 968
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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