Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_O14
(655 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C... 30 1.5
At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C... 30 1.5
At3g15670.1 68416.m01986 late embryogenesis abundant protein, pu... 29 2.7
At2g48160.1 68415.m06031 PWWP domain-containing protein 29 2.7
At5g20440.1 68418.m02430 mob1/phocein family protein contains Pf... 29 3.6
At2g36070.1 68415.m04429 mitochondrial import inner membrane tra... 29 3.6
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 28 4.7
At1g62380.1 68414.m07038 1-aminocyclopropane-1-carboxylate oxida... 28 4.7
At5g46070.1 68418.m05665 guanylate-binding family protein contai... 28 6.2
At3g50370.1 68416.m05508 expressed protein 27 8.2
At2g19950.1 68415.m02332 expressed protein contains 2 transmembr... 27 8.2
>At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C
(PP2C6) identical to Ser/Thr protein phosphatase 2C
(PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
protein phosphatase 2C (GI:3608412) [Mesembryanthemum
crystallinum]; contains Pfam PF00481 : Protein
phosphatase 2C domain; contains TIGRFAM TIGR01573 :
CRISPR-associated protein Cas2
Length = 384
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/69 (27%), Positives = 29/69 (42%)
Frame = +2
Query: 341 AXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNVQ 520
A + + +IE EELR HPD + N L+ K+ V+ +Q S + +
Sbjct: 189 AVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSIGDAYLKRAE 246
Query: 521 XTNXKLAPK 547
L PK
Sbjct: 247 FNQEPLLPK 255
>At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C
(PP2C6) identical to Ser/Thr protein phosphatase 2C
(PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
protein phosphatase 2C (GI:3608412) [Mesembryanthemum
crystallinum]; contains Pfam PF00481 : Protein
phosphatase 2C domain; contains TIGRFAM TIGR01573 :
CRISPR-associated protein Cas2
Length = 384
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/69 (27%), Positives = 29/69 (42%)
Frame = +2
Query: 341 AXEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNVQ 520
A + + +IE EELR HPD + N L+ K+ V+ +Q S + +
Sbjct: 189 AVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSIGDAYLKRAE 246
Query: 521 XTNXKLAPK 547
L PK
Sbjct: 247 FNQEPLLPK 255
>At3g15670.1 68416.m01986 late embryogenesis abundant protein,
putative / LEA protein, putative similar to SP|P13934
Late embryogenesis abundant protein 76 (LEA 76)
{Brassica napus}; contains Pfam profile PF02987: Late
embryogenesis abundant protein
Length = 225
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 1/80 (1%)
Frame = +2
Query: 323 GDANGXAXEALEQSRQNIERTAEELR-KAHPDVEKNATALREKLQAAVQNTVQESHKLAX 499
G A G + E+ R +TA+ + KAH + + QAA Q + +
Sbjct: 22 GQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDKTSQTAQAAQQKAHETAQSAKE 81
Query: 500 KVSSNVQXTNXKLAPKIXAA 559
K S Q K AA
Sbjct: 82 KTSQTAQTAQQKAHETTQAA 101
>At2g48160.1 68415.m06031 PWWP domain-containing protein
Length = 1366
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +3
Query: 27 PVRISSALSLSTAHH-GRQVR--SSLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP 185
P+R++ LS ST H+ G + S ++L S P++DG+ + R H PH P
Sbjct: 1184 PLRMNPPLSGSTMHYQGPESSYISGVQLTNSIPQADGSNFQHRPYPSHPHPHPPPP 1239
>At5g20440.1 68418.m02430 mob1/phocein family protein contains Pfam
profile: PF03637 mob1/phocein family
Length = 217
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +2
Query: 362 SRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSN 514
S N+ RT ++ HP+ + + +RE + + ++E+ +L V N
Sbjct: 9 SSNNVVRTVPSKKRKHPEYKSKGSQIRELISGIRSDNLREAVRLPQGVDIN 59
>At2g36070.1 68415.m04429 mitochondrial import inner membrane
translocase subunit TIM44, putative contains similarity
to Swiss-Prot:O35857 import inner membrane translocase
subunit TIM44, mitochondrial precursor [Mus musculus];
contains Pfam domian PF04280: Mitochondrial import inner
membrane, translocase subunit TIM44
Length = 469
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +2
Query: 356 EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESHKLAXKVSSNVQ 520
+++ + + AEEL+ D++ EKL Q E+ +A KVSS+V+
Sbjct: 66 QKTVKEFKERAEELQGVKEDLKVRTKQTTEKLYKQGQGVWTEAESVAKKVSSSVK 120
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 28.3 bits (60), Expect = 4.7
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +2
Query: 347 EALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQ--ES-HKLAXKVSSN 514
EAL+ S Q + AE LRKA + E + L +L+ A + Q ES +L K+S++
Sbjct: 997 EALKASLQAERQAAENLRKAFSEAEARNSELATELENATRKADQLHESVQRLEEKLSNS 1055
>At1g62380.1 68414.m07038 1-aminocyclopropane-1-carboxylate oxidase,
putative / ACC oxidase, putative nearly identical to ACC
oxidase (ACC ox1) GI:587086 from [Brassica oleracea]
Length = 320
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 145 DFFKDIEHHTKEFHKTL-EQQFNSLTKSKDAQDFSKAWKD 261
D IE TK+ +KT EQ+FN + KSK + +D
Sbjct: 47 DLMDKIEKMTKDHYKTCQEQKFNDMLKSKGLDNLETEVED 86
>At5g46070.1 68418.m05665 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding
protein, C-terminal domain
Length = 1060
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = +2
Query: 368 QNIERTAEELRKAHPDVEKNATALREKLQAA---VQNTVQE 481
+++E+ +E RKAH + A AL +LQAA V N QE
Sbjct: 876 KSLEKLLDEERKAHIAANRRAEALSLELQAAQAHVDNLQQE 916
>At3g50370.1 68416.m05508 expressed protein
Length = 2179
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 356 EQSRQNIERTAEELRKAHPDVEKNATALRE--KLQAAVQNTVQESHKLAXK 502
EQ R R AEELRK+ + EK+ + E + QAA Q ++ K++ +
Sbjct: 531 EQERLEATRRAEELRKSKEE-EKHRLFMEEERRKQAAKQKLLELEEKISRR 580
>At2g19950.1 68415.m02332 expressed protein contains 2 transmembrane
domains; weak similarity to HPSR2 - heavy chain
potential motor protein (GI:871048) [Giardia
intestinalis]
Length = 702
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 314 AALGDANGXAXEALEQSRQNIERTAEELRKAHPDVEKNATALREK 448
AAL + + +AL + ER AEE R AH + K A RE+
Sbjct: 370 AALNEGKLSSLQALREELATTERRAEEERSAH-NATKMAAMERER 413
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,581,908
Number of Sequences: 28952
Number of extensions: 154373
Number of successful extensions: 657
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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