BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_O10
(589 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 26 1.0
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 24 4.2
AF017062-1|AAC47144.2| 649|Anopheles gambiae soluble guanylyl c... 23 5.5
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 23 9.7
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 25.8 bits (54), Expect = 1.0
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +2
Query: 350 FSCRRCSQCTRNKDYYQRHLGY 415
+ C +C+Q R K +RH+ Y
Sbjct: 383 YKCDQCAQTFRQKQLLKRHMNY 404
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 23.8 bits (49), Expect = 4.2
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -1
Query: 259 KTSTSIQSG--GITWHFCFCFSMIASQSGTFTGKPARNGPNSPHIKYILSWVKF 104
K S Q+G G T FC SQS + K A+ H+++ +S+V F
Sbjct: 209 KVIPSHQTGILGTTEGMIFCTEACFSQSRRASFKRAKTCDWCRHVRHAVSYVDF 262
>AF017062-1|AAC47144.2| 649|Anopheles gambiae soluble guanylyl
cyclase beta subunit protein.
Length = 649
Score = 23.4 bits (48), Expect = 5.5
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -1
Query: 208 CFSMIASQSGTFTGKPARNGP 146
C ++AS++ + +G PARNGP
Sbjct: 224 CKRILASKTSS-SGGPARNGP 243
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 22.6 bits (46), Expect = 9.7
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +2
Query: 350 FSCRRCSQCTRNKDYYQRH 406
F C C R K YQ+H
Sbjct: 349 FQCNLCDMSYRTKLQYQKH 367
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,501
Number of Sequences: 2352
Number of extensions: 12223
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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