BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P02_F_O10 (589 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CR457186-1|CAG33467.1| 185|Homo sapiens Pfs2 protein. 162 7e-40 BC062444-1|AAH62444.1| 185|Homo sapiens GINS complex subunit 2 ... 162 7e-40 BC010164-1|AAH10164.1| 185|Homo sapiens GINS complex subunit 2 ... 162 7e-40 BC003186-1|AAH03186.1| 185|Homo sapiens GINS complex subunit 2 ... 162 7e-40 AK223123-1|BAD96843.1| 185|Homo sapiens DNA replication complex... 162 7e-40 AK001275-1|BAA91595.1| 185|Homo sapiens protein ( Homo sapiens ... 162 7e-40 AF201939-1|AAF86875.1| 185|Homo sapiens DC5 protein. 162 7e-40 AF151880-1|AAD34117.1| 185|Homo sapiens CGI-122 protein protein. 162 7e-40 >CR457186-1|CAG33467.1| 185|Homo sapiens Pfs2 protein. Length = 185 Score = 162 bits (394), Expect = 7e-40 Identities = 72/171 (42%), Positives = 112/171 (65%) Frame = +3 Query: 48 MEPYEIEFIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHV 227 M+ E+EF+ E +++I PNF+ DKIYLI G+ GPF GLPV VPLWLAI LKQ+QKC + Sbjct: 1 MDAAEVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRL 60 Query: 228 IPPDWMDVEVLXNIKXXEKRSXFFTKMPNEHYMVEAKLILGSAAEDVPNAPEXXXXXXXX 407 +PP+WMDVE L ++ E++ FT MP+ +YM KL+L A++++P A E Sbjct: 61 LPPEWMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDM 120 Query: 408 XXXXMSKLRTSMDALMKTGGGYGRLXHLTMMEINSVKPLLPAAMDNLLRMQ 560 ++KLR S D+ ++ + +L +LT+MEIN+ L A++++ +++ Sbjct: 121 WDTRIAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGTFLTQALNHMYKLR 171 >BC062444-1|AAH62444.1| 185|Homo sapiens GINS complex subunit 2 (Psf2 homolog) protein. Length = 185 Score = 162 bits (394), Expect = 7e-40 Identities = 72/171 (42%), Positives = 112/171 (65%) Frame = +3 Query: 48 MEPYEIEFIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHV 227 M+ E+EF+ E +++I PNF+ DKIYLI G+ GPF GLPV VPLWLAI LKQ+QKC + Sbjct: 1 MDAAEVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRL 60 Query: 228 IPPDWMDVEVLXNIKXXEKRSXFFTKMPNEHYMVEAKLILGSAAEDVPNAPEXXXXXXXX 407 +PP+WMDVE L ++ E++ FT MP+ +YM KL+L A++++P A E Sbjct: 61 LPPEWMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDM 120 Query: 408 XXXXMSKLRTSMDALMKTGGGYGRLXHLTMMEINSVKPLLPAAMDNLLRMQ 560 ++KLR S D+ ++ + +L +LT+MEIN+ L A++++ +++ Sbjct: 121 WDTRIAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGTFLTQALNHMYKLR 171 >BC010164-1|AAH10164.1| 185|Homo sapiens GINS complex subunit 2 (Psf2 homolog) protein. Length = 185 Score = 162 bits (394), Expect = 7e-40 Identities = 72/171 (42%), Positives = 112/171 (65%) Frame = +3 Query: 48 MEPYEIEFIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHV 227 M+ E+EF+ E +++I PNF+ DKIYLI G+ GPF GLPV VPLWLAI LKQ+QKC + Sbjct: 1 MDAAEVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRL 60 Query: 228 IPPDWMDVEVLXNIKXXEKRSXFFTKMPNEHYMVEAKLILGSAAEDVPNAPEXXXXXXXX 407 +PP+WMDVE L ++ E++ FT MP+ +YM KL+L A++++P A E Sbjct: 61 LPPEWMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDM 120 Query: 408 XXXXMSKLRTSMDALMKTGGGYGRLXHLTMMEINSVKPLLPAAMDNLLRMQ 560 ++KLR S D+ ++ + +L +LT+MEIN+ L A++++ +++ Sbjct: 121 WDTRIAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGTFLTQALNHMYKLR 171 >BC003186-1|AAH03186.1| 185|Homo sapiens GINS complex subunit 2 (Psf2 homolog) protein. Length = 185 Score = 162 bits (394), Expect = 7e-40 Identities = 72/171 (42%), Positives = 112/171 (65%) Frame = +3 Query: 48 MEPYEIEFIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHV 227 M+ E+EF+ E +++I PNF+ DKIYLI G+ GPF GLPV VPLWLAI LKQ+QKC + Sbjct: 1 MDAAEVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRL 60 Query: 228 IPPDWMDVEVLXNIKXXEKRSXFFTKMPNEHYMVEAKLILGSAAEDVPNAPEXXXXXXXX 407 +PP+WMDVE L ++ E++ FT MP+ +YM KL+L A++++P A E Sbjct: 61 LPPEWMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDM 120 Query: 408 XXXXMSKLRTSMDALMKTGGGYGRLXHLTMMEINSVKPLLPAAMDNLLRMQ 560 ++KLR S D+ ++ + +L +LT+MEIN+ L A++++ +++ Sbjct: 121 WDTRIAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGTFLTQALNHMYKLR 171 >AK223123-1|BAD96843.1| 185|Homo sapiens DNA replication complex GINS protein PSF2 variant protein. Length = 185 Score = 162 bits (394), Expect = 7e-40 Identities = 72/171 (42%), Positives = 112/171 (65%) Frame = +3 Query: 48 MEPYEIEFIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHV 227 M+ E+EF+ E +++I PNF+ DKIYLI G+ GPF GLPV VPLWLAI LKQ+QKC + Sbjct: 1 MDAAEVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRL 60 Query: 228 IPPDWMDVEVLXNIKXXEKRSXFFTKMPNEHYMVEAKLILGSAAEDVPNAPEXXXXXXXX 407 +PP+WMDVE L ++ E++ FT MP+ +YM KL+L A++++P A E Sbjct: 61 LPPEWMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDM 120 Query: 408 XXXXMSKLRTSMDALMKTGGGYGRLXHLTMMEINSVKPLLPAAMDNLLRMQ 560 ++KLR S D+ ++ + +L +LT+MEIN+ L A++++ +++ Sbjct: 121 WDTRIAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGTFLTQALNHMYKLR 171 >AK001275-1|BAA91595.1| 185|Homo sapiens protein ( Homo sapiens cDNA FLJ10413 fis, clone NT2RP1000063. ). Length = 185 Score = 162 bits (394), Expect = 7e-40 Identities = 72/171 (42%), Positives = 112/171 (65%) Frame = +3 Query: 48 MEPYEIEFIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHV 227 M+ E+EF+ E +++I PNF+ DKIYLI G+ GPF GLPV VPLWLAI LKQ+QKC + Sbjct: 1 MDAAEVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRL 60 Query: 228 IPPDWMDVEVLXNIKXXEKRSXFFTKMPNEHYMVEAKLILGSAAEDVPNAPEXXXXXXXX 407 +PP+WMDVE L ++ E++ FT MP+ +YM KL+L A++++P A E Sbjct: 61 LPPEWMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDM 120 Query: 408 XXXXMSKLRTSMDALMKTGGGYGRLXHLTMMEINSVKPLLPAAMDNLLRMQ 560 ++KLR S D+ ++ + +L +LT+MEIN+ L A++++ +++ Sbjct: 121 WDTRIAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGTFLTQALNHMYKLR 171 >AF201939-1|AAF86875.1| 185|Homo sapiens DC5 protein. Length = 185 Score = 162 bits (394), Expect = 7e-40 Identities = 72/171 (42%), Positives = 112/171 (65%) Frame = +3 Query: 48 MEPYEIEFIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHV 227 M+ E+EF+ E +++I PNF+ DKIYLI G+ GPF GLPV VPLWLAI LKQ+QKC + Sbjct: 1 MDAAEVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRL 60 Query: 228 IPPDWMDVEVLXNIKXXEKRSXFFTKMPNEHYMVEAKLILGSAAEDVPNAPEXXXXXXXX 407 +PP+WMDVE L ++ E++ FT MP+ +YM KL+L A++++P A E Sbjct: 61 LPPEWMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDM 120 Query: 408 XXXXMSKLRTSMDALMKTGGGYGRLXHLTMMEINSVKPLLPAAMDNLLRMQ 560 ++KLR S D+ ++ + +L +LT+MEIN+ L A++++ +++ Sbjct: 121 WDTRIAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGTFLTQALNHMYKLR 171 >AF151880-1|AAD34117.1| 185|Homo sapiens CGI-122 protein protein. Length = 185 Score = 162 bits (394), Expect = 7e-40 Identities = 72/171 (42%), Positives = 112/171 (65%) Frame = +3 Query: 48 MEPYEIEFIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHV 227 M+ E+EF+ E +++I PNF+ DKIYLI G+ GPF GLPV VPLWLAI LKQ+QKC + Sbjct: 1 MDAAEVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRL 60 Query: 228 IPPDWMDVEVLXNIKXXEKRSXFFTKMPNEHYMVEAKLILGSAAEDVPNAPEXXXXXXXX 407 +PP+WMDVE L ++ E++ FT MP+ +YM KL+L A++++P A E Sbjct: 61 LPPEWMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDM 120 Query: 408 XXXXMSKLRTSMDALMKTGGGYGRLXHLTMMEINSVKPLLPAAMDNLLRMQ 560 ++KLR S D+ ++ + +L +LT+MEIN+ L A++++ +++ Sbjct: 121 WDTRIAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGTFLTQALNHMYKLR 171 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 85,322,389 Number of Sequences: 237096 Number of extensions: 1818313 Number of successful extensions: 6881 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 6767 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6881 length of database: 76,859,062 effective HSP length: 86 effective length of database: 56,468,806 effective search space used: 6155099854 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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