Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_O10
         (589 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457186-1|CAG33467.1|  185|Homo sapiens Pfs2 protein.                162   7e-40
BC062444-1|AAH62444.1|  185|Homo sapiens GINS complex subunit 2 ...   162   7e-40
BC010164-1|AAH10164.1|  185|Homo sapiens GINS complex subunit 2 ...   162   7e-40
BC003186-1|AAH03186.1|  185|Homo sapiens GINS complex subunit 2 ...   162   7e-40
AK223123-1|BAD96843.1|  185|Homo sapiens DNA replication complex...   162   7e-40
AK001275-1|BAA91595.1|  185|Homo sapiens protein ( Homo sapiens ...   162   7e-40
AF201939-1|AAF86875.1|  185|Homo sapiens DC5 protein.                 162   7e-40
AF151880-1|AAD34117.1|  185|Homo sapiens CGI-122 protein protein.     162   7e-40

>CR457186-1|CAG33467.1|  185|Homo sapiens Pfs2 protein.
          Length = 185

 Score =  162 bits (394), Expect = 7e-40
 Identities = 72/171 (42%), Positives = 112/171 (65%)
 Frame = +3

Query: 48  MEPYEIEFIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHV 227
           M+  E+EF+ E  +++I PNF+ DKIYLI G+ GPF  GLPV VPLWLAI LKQ+QKC +
Sbjct: 1   MDAAEVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRL 60

Query: 228 IPPDWMDVEVLXNIKXXEKRSXFFTKMPNEHYMVEAKLILGSAAEDVPNAPEXXXXXXXX 407
           +PP+WMDVE L  ++  E++   FT MP+ +YM   KL+L  A++++P A E        
Sbjct: 61  LPPEWMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDM 120

Query: 408 XXXXMSKLRTSMDALMKTGGGYGRLXHLTMMEINSVKPLLPAAMDNLLRMQ 560
               ++KLR S D+ ++    + +L +LT+MEIN+    L  A++++ +++
Sbjct: 121 WDTRIAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGTFLTQALNHMYKLR 171


>BC062444-1|AAH62444.1|  185|Homo sapiens GINS complex subunit 2
           (Psf2 homolog) protein.
          Length = 185

 Score =  162 bits (394), Expect = 7e-40
 Identities = 72/171 (42%), Positives = 112/171 (65%)
 Frame = +3

Query: 48  MEPYEIEFIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHV 227
           M+  E+EF+ E  +++I PNF+ DKIYLI G+ GPF  GLPV VPLWLAI LKQ+QKC +
Sbjct: 1   MDAAEVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRL 60

Query: 228 IPPDWMDVEVLXNIKXXEKRSXFFTKMPNEHYMVEAKLILGSAAEDVPNAPEXXXXXXXX 407
           +PP+WMDVE L  ++  E++   FT MP+ +YM   KL+L  A++++P A E        
Sbjct: 61  LPPEWMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDM 120

Query: 408 XXXXMSKLRTSMDALMKTGGGYGRLXHLTMMEINSVKPLLPAAMDNLLRMQ 560
               ++KLR S D+ ++    + +L +LT+MEIN+    L  A++++ +++
Sbjct: 121 WDTRIAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGTFLTQALNHMYKLR 171


>BC010164-1|AAH10164.1|  185|Homo sapiens GINS complex subunit 2
           (Psf2 homolog) protein.
          Length = 185

 Score =  162 bits (394), Expect = 7e-40
 Identities = 72/171 (42%), Positives = 112/171 (65%)
 Frame = +3

Query: 48  MEPYEIEFIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHV 227
           M+  E+EF+ E  +++I PNF+ DKIYLI G+ GPF  GLPV VPLWLAI LKQ+QKC +
Sbjct: 1   MDAAEVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRL 60

Query: 228 IPPDWMDVEVLXNIKXXEKRSXFFTKMPNEHYMVEAKLILGSAAEDVPNAPEXXXXXXXX 407
           +PP+WMDVE L  ++  E++   FT MP+ +YM   KL+L  A++++P A E        
Sbjct: 61  LPPEWMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDM 120

Query: 408 XXXXMSKLRTSMDALMKTGGGYGRLXHLTMMEINSVKPLLPAAMDNLLRMQ 560
               ++KLR S D+ ++    + +L +LT+MEIN+    L  A++++ +++
Sbjct: 121 WDTRIAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGTFLTQALNHMYKLR 171


>BC003186-1|AAH03186.1|  185|Homo sapiens GINS complex subunit 2
           (Psf2 homolog) protein.
          Length = 185

 Score =  162 bits (394), Expect = 7e-40
 Identities = 72/171 (42%), Positives = 112/171 (65%)
 Frame = +3

Query: 48  MEPYEIEFIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHV 227
           M+  E+EF+ E  +++I PNF+ DKIYLI G+ GPF  GLPV VPLWLAI LKQ+QKC +
Sbjct: 1   MDAAEVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRL 60

Query: 228 IPPDWMDVEVLXNIKXXEKRSXFFTKMPNEHYMVEAKLILGSAAEDVPNAPEXXXXXXXX 407
           +PP+WMDVE L  ++  E++   FT MP+ +YM   KL+L  A++++P A E        
Sbjct: 61  LPPEWMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDM 120

Query: 408 XXXXMSKLRTSMDALMKTGGGYGRLXHLTMMEINSVKPLLPAAMDNLLRMQ 560
               ++KLR S D+ ++    + +L +LT+MEIN+    L  A++++ +++
Sbjct: 121 WDTRIAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGTFLTQALNHMYKLR 171


>AK223123-1|BAD96843.1|  185|Homo sapiens DNA replication complex
           GINS protein PSF2 variant protein.
          Length = 185

 Score =  162 bits (394), Expect = 7e-40
 Identities = 72/171 (42%), Positives = 112/171 (65%)
 Frame = +3

Query: 48  MEPYEIEFIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHV 227
           M+  E+EF+ E  +++I PNF+ DKIYLI G+ GPF  GLPV VPLWLAI LKQ+QKC +
Sbjct: 1   MDAAEVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRL 60

Query: 228 IPPDWMDVEVLXNIKXXEKRSXFFTKMPNEHYMVEAKLILGSAAEDVPNAPEXXXXXXXX 407
           +PP+WMDVE L  ++  E++   FT MP+ +YM   KL+L  A++++P A E        
Sbjct: 61  LPPEWMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDM 120

Query: 408 XXXXMSKLRTSMDALMKTGGGYGRLXHLTMMEINSVKPLLPAAMDNLLRMQ 560
               ++KLR S D+ ++    + +L +LT+MEIN+    L  A++++ +++
Sbjct: 121 WDTRIAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGTFLTQALNHMYKLR 171


>AK001275-1|BAA91595.1|  185|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10413 fis, clone NT2RP1000063. ).
          Length = 185

 Score =  162 bits (394), Expect = 7e-40
 Identities = 72/171 (42%), Positives = 112/171 (65%)
 Frame = +3

Query: 48  MEPYEIEFIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHV 227
           M+  E+EF+ E  +++I PNF+ DKIYLI G+ GPF  GLPV VPLWLAI LKQ+QKC +
Sbjct: 1   MDAAEVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRL 60

Query: 228 IPPDWMDVEVLXNIKXXEKRSXFFTKMPNEHYMVEAKLILGSAAEDVPNAPEXXXXXXXX 407
           +PP+WMDVE L  ++  E++   FT MP+ +YM   KL+L  A++++P A E        
Sbjct: 61  LPPEWMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDM 120

Query: 408 XXXXMSKLRTSMDALMKTGGGYGRLXHLTMMEINSVKPLLPAAMDNLLRMQ 560
               ++KLR S D+ ++    + +L +LT+MEIN+    L  A++++ +++
Sbjct: 121 WDTRIAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGTFLTQALNHMYKLR 171


>AF201939-1|AAF86875.1|  185|Homo sapiens DC5 protein.
          Length = 185

 Score =  162 bits (394), Expect = 7e-40
 Identities = 72/171 (42%), Positives = 112/171 (65%)
 Frame = +3

Query: 48  MEPYEIEFIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHV 227
           M+  E+EF+ E  +++I PNF+ DKIYLI G+ GPF  GLPV VPLWLAI LKQ+QKC +
Sbjct: 1   MDAAEVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRL 60

Query: 228 IPPDWMDVEVLXNIKXXEKRSXFFTKMPNEHYMVEAKLILGSAAEDVPNAPEXXXXXXXX 407
           +PP+WMDVE L  ++  E++   FT MP+ +YM   KL+L  A++++P A E        
Sbjct: 61  LPPEWMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDM 120

Query: 408 XXXXMSKLRTSMDALMKTGGGYGRLXHLTMMEINSVKPLLPAAMDNLLRMQ 560
               ++KLR S D+ ++    + +L +LT+MEIN+    L  A++++ +++
Sbjct: 121 WDTRIAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGTFLTQALNHMYKLR 171


>AF151880-1|AAD34117.1|  185|Homo sapiens CGI-122 protein protein.
          Length = 185

 Score =  162 bits (394), Expect = 7e-40
 Identities = 72/171 (42%), Positives = 112/171 (65%)
 Frame = +3

Query: 48  MEPYEIEFIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHV 227
           M+  E+EF+ E  +++I PNF+ DKIYLI G+ GPF  GLPV VPLWLAI LKQ+QKC +
Sbjct: 1   MDAAEVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRL 60

Query: 228 IPPDWMDVEVLXNIKXXEKRSXFFTKMPNEHYMVEAKLILGSAAEDVPNAPEXXXXXXXX 407
           +PP+WMDVE L  ++  E++   FT MP+ +YM   KL+L  A++++P A E        
Sbjct: 61  LPPEWMDVEKLEKMRDHERKEETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDM 120

Query: 408 XXXXMSKLRTSMDALMKTGGGYGRLXHLTMMEINSVKPLLPAAMDNLLRMQ 560
               ++KLR S D+ ++    + +L +LT+MEIN+    L  A++++ +++
Sbjct: 121 WDTRIAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGTFLTQALNHMYKLR 171


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,322,389
Number of Sequences: 237096
Number of extensions: 1818313
Number of successful extensions: 6881
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6881
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)