Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_O10
         (589 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   2.2  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    22   3.9  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    22   5.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   5.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   5.1  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    22   5.1  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   5.1  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.0  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   9.0  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
          protein.
          Length = 486

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 80 LTNKLDFIRFHYYFYGFNN 24
          +TN LDF    YYFY ++N
Sbjct: 21 MTNVLDF---DYYFYDYSN 36


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 127 YILSWVKFGVILII 86
           Y+LSW  +GV+ +I
Sbjct: 283 YVLSWTPYGVMSMI 296


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = +2

Query: 350 FSCRRCSQCTRNKDYYQRHL 409
           F C +CS    NK     HL
Sbjct: 17  FKCEKCSYSCVNKSMLNSHL 36


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 165 LPVNVPLWLAIMLKQKQKCHVIPPDWMDVEVLXNIKXXEK 284
           LPV   LW  I L   Q  H+     ++ E++ N++  EK
Sbjct: 52  LPVCNGLWRWIRLTYGQTNHISLTLDLEYELVENLQANEK 91


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 165 LPVNVPLWLAIMLKQKQKCHVIPPDWMDVEVLXNIKXXEK 284
           LPV   LW  I L   Q  H+     ++ E++ N++  EK
Sbjct: 90  LPVCNGLWRWIRLTYGQTNHISLTLDLEYELVENLQANEK 129


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 106 TLPMIKYT*YAVNLVRFVLVYL*TYHSGWLS 198
           T P I    +  N+++FV V   TY   W S
Sbjct: 498 TTPAICVGVFTFNIIKFVPVKYLTYEYPWWS 528


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 106 TLPMIKYT*YAVNLVRFVLVYL*TYHSGWLS 198
           T P I    +  N+++FV V   TY   W S
Sbjct: 551 TTPAICVGVFTFNIIKFVPVKYLTYEYPWWS 581


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 60  EIEFIGENRIISITPNFTHDKIYL 131
           E+ FI  N I  + PN   DK+ L
Sbjct: 620 ELLFINNNYINLVRPNTFTDKVNL 643


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +2

Query: 350 FSCRRCSQCTRNKDYYQRHL 409
           + C  C +    K+ YQ HL
Sbjct: 62  YQCLLCQKAFDQKNLYQSHL 81


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,003
Number of Sequences: 438
Number of extensions: 3279
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)