BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P02_F_O05 (656 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 06_03_0639 + 23055223-23055678,23055788-23056627 36 0.028 06_03_0983 - 26559772-26559915,26560149-26560251,26560335-265605... 31 1.1 04_04_0559 - 26234106-26235169,26235437-26235452 31 1.1 02_01_0577 + 4280590-4281225,4281749-4282102,4282214-4282412,428... 29 3.3 03_05_1069 + 30118930-30120120 29 4.3 03_02_0482 + 8798931-8799024,8799118-8799253,8799435-8799506,879... 28 7.5 >06_03_0639 + 23055223-23055678,23055788-23056627 Length = 431 Score = 35.9 bits (79), Expect = 0.028 Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 5/85 (5%) Frame = -3 Query: 300 PSVATALIMVGEPRRSHPSPAVVSAMDVRIIPLHRSASSNRTPLXSDI----LVLEILFD 133 P A + VGE R +PA+ A IP SA+ P+ +++ L ++I D Sbjct: 175 PGAAQFMTAVGEIARGRAAPALAPAWGRDAIPCPPSAAVGPLPVPTELRLQYLAMDISTD 234 Query: 132 LVHIFYTRIL-*TNKQCASFNVTIA 61 + F R L T +C++F V IA Sbjct: 235 YIDHFKARFLEQTGHRCSAFEVLIA 259 >06_03_0983 - 26559772-26559915,26560149-26560251,26560335-26560548, 26563352-26563550,26564509-26564862,26565430-26566086 Length = 556 Score = 30.7 bits (66), Expect = 1.1 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Frame = +3 Query: 486 LLSWGTGAL-TFRQGEDFXNRIAWYFKRQXFKSGEVIALFMETQPEYIFVWLGLAKM 653 L+ TGA+ ++ + E+ R A +R G+V+ + PE+ F +LG A++ Sbjct: 48 LIDGQTGAVYSYGEVEELSRRAAAGLRRLGVGKGDVVMSLLRNCPEFAFTFLGAARL 104 >04_04_0559 - 26234106-26235169,26235437-26235452 Length = 359 Score = 30.7 bits (66), Expect = 1.1 Identities = 17/50 (34%), Positives = 25/50 (50%) Frame = +2 Query: 143 ISSTRMSXKRGVRFEEAERCKGIILTSIALTTAGLGWLLRGSPTMMSAVA 292 +SS ++ K G E+ R GI+ + L+T L WL+ S T S A Sbjct: 10 VSSNQLDDKDGREEEQVVRGLGILPAQLELSTKELPWLVGDSATQRSRFA 59 >02_01_0577 + 4280590-4281225,4281749-4282102,4282214-4282412, 4284991-4285204,4285299-4285401,4285481-4285639 Length = 554 Score = 29.1 bits (62), Expect = 3.3 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = +3 Query: 486 LLSWGTG-ALTFRQGEDFXNRIAWYFKRQXFKSGEVIALFMETQPEYIFVWLGLAKM 653 L+ TG + T+ + E R A +R G+V+ + PE+ F +LG A++ Sbjct: 44 LIDGQTGESYTYAEVESASRRAAAGLRRMGVGKGDVVMSLLRNCPEFAFSFLGAARL 100 >03_05_1069 + 30118930-30120120 Length = 396 Score = 28.7 bits (61), Expect = 4.3 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = +2 Query: 248 GWLLRGSPTMMSAVATLGAYLLTGDRYQWIYLWKK 352 G +LRG + +A G+ LL+G IY+W++ Sbjct: 259 GGVLRGHKKAVFCLAAAGSLLLSGSADNTIYVWRR 293 >03_02_0482 + 8798931-8799024,8799118-8799253,8799435-8799506, 8799583-8799654,8799798-8799869,8800133-8800204, 8800530-8800627,8800892-8801062,8801141-8801473, 8802494-8802739,8802884-8803017,8803132-8803344 Length = 570 Score = 27.9 bits (59), Expect = 7.5 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = +2 Query: 275 MMSAVATLGAYLLTGDRYQW-IYLWKKTHKRDFLXLRVLL 391 ++SAVAT+GA LL W +L+K K+D RV L Sbjct: 221 VISAVATVGALLLVALMCFWGCFLYKNFGKKDIHGFRVEL 260 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,901,069 Number of Sequences: 37544 Number of extensions: 302000 Number of successful extensions: 761 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 746 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 761 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1644004708 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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